Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / appletgui / TreePanel.java
2023-08-10 Ben SoaresJAL-629 Change all stdout and stderr output to use...
2019-03-21 Ben SoaresJAL-3130 Replaced deprecated Class.newInstance() with...
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-05-05 kiramtMerge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges
2017-05-02 gmungocJAL-2499 inlined two 1-line methods
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside...
2017-04-24 kiramtJAL-2388 Hidden cols separated from column selection...
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin...
2017-03-06 gmungocJAL-2428 separate TreeModel from TreeBuilder/NJTree...
2017-02-27 gmungocJAL-1632 refactored NJTree constructor to include Simil...
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
2017-02-20 gmungocJAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix...
2017-02-17 gmungocJAL-2416 scoreMatrices removed from ResidueProperties
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-01-07 Jim ProcterJAL-1483 source formatting
2015-01-07 Jim ProcterJAL-1483 refactor NJTree constructor to allow preconfig...
2015-01-07 Jim ProcterJAL-1483 organise imports
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-06-06 Jim ProcterJAL-1517 source formatting
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2
2014-05-22 Jim ProcterJAL-1503 update version in GPL header
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs...
2012-11-08 jproctertidy imports
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty...
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-09-27 jprocterapply version 2.7 copyright
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager...
2011-02-04 jproctergroup associated annotation and logos JAL-516 JAL-759
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-04-30 jprocterjalview 2.5 release banner
2010-04-23 jprocterfix for bug #8333
2009-06-08 jprocterapply gpl development license
2008-09-04 jproctermerge from 2_4_Release branch
2008-08-13 jprocterensure input data can be recovered for tree and PCA...
2007-11-08 jprocterinitialise treeCanvas before starting loading thread
2007-10-27 jprocterenabled platform dependent embedding of menuBar with...
2007-02-07 amwaterhouseFormatting
2006-08-21 amwaterhouseheader updated
2006-08-10 amwaterhouseCheck alAndColSel are not null
2006-08-08 amwaterhouseApplet has hidden regions
2006-08-07 jprocteradded commented out seqStrings comment.
2006-07-28 amwaterhouseApplet doesnt have hidden columns
2006-07-26 jprocterImplemented CIGAR representation of an Alignment view...
2006-07-18 amwaterhouseModified for hidden region/group calculation
2006-04-04 amwaterhouseset current tree once the tree is prepared
2005-12-22 amwaterhouseReduced jar size by 20%
2005-12-06 amwaterhouseafter merge
2005-09-28 amwaterhouseWrap alignment with annotations
2005-09-08 amwaterhouseOnly 1 NJtree
2005-09-08 amwaterhouseLoad in a thread
2005-09-01 amwaterhouseNeed reference to mainApplet
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-05-25 amwaterhouseformatting changes
2005-05-20 jprocteradded tree node property for sequence placeholders.
2005-05-11 amwaterhousereads in treeFile from applet parameter
2005-05-04 amwaterhouseApplet files