git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
Merge branch 'releases/Release_2_11_3_Branch'
[jalview.git] / src / jalview / io / IdentifyFile.java
2023-11-03 James ProcterJAL-4090 JAL-1551 spotlessApply commit | commitdiff
2023-10-30 James ProcterJAL-4315 identify feature settings file from its xml... commit | commitdiff
2023-05-03 Ben SoaresJAL-629 added eps and imagemap. Added --output and... commit | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 commit | commitdiff
2021-09-21 Ben SoaresJAL-3691 automatic insertion of Locale.ROOT to toUpperC... commit | commitdiff
2021-09-17 gmungocJAL-1260 file formats and IdentifyFile updates for... commit | commitdiff
2020-08-10 Jim ProcterJAL-3691 toUpperCase(Locale.ROOT) for all standard... commit | commitdiff
2019-04-04 gmungocJAL-3220 j2sIgnore on main methods on test / utility... commit | commitdiff
2018-11-15 gmungocJAL-3032 JAL-2344 project files are 'identifiable' commit | commitdiff
2018-06-28 hansonrJAL-3032 DND enabled; additional io changes for File... commit | commitdiff
2018-06-27 hansonrJAL-3032 part2 local file reading by JFileChooser commit | commitdiff
2018-06-22 gmungocJAL-3032 more informative failure message commit | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo commit | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList commit | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting commit | commitdiff
2017-06-09 gmungocJAL-2446 merged to spike branch commit | commitdiff
2017-05-22 gmungocJAL-2543 identify as JSON before HTML commit | commitdiff
2017-03-27 gmungocJAL-2416 parse score matrices in either NCBI or AAindex... commit | commitdiff
2017-02-14 gmungocParsing moved to (new) ScoreMatrixFile, drag and drop... commit | commitdiff
2017-01-11 gmungocJAL-2344 separated AlignmentFileI into AlignmentFileRea... commit | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge commit | commitdiff
2016-11-24 gmungocFurther tweaks to get tests passing commit | commitdiff
2016-11-24 gmungocFileFormatI further tweaks, clean compile commit | commitdiff
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch commit | commitdiff
2016-10-06 Jim ProcterJAL-2089 Merge branch releases/Release_2_10_Branch... commit | commitdiff
2016-10-05 Jim ProcterJAL-2189 source formatting commit | commitdiff
2016-07-11 gmungocfile format enum wip changes commit | commitdiff
2016-05-09 gmungocJAL-2098 identify feature file with "<" in feature... commit | commitdiff
2016-03-21 tcofoegbudevelop merge commit | commitdiff
2016-01-21 tcofoegbuJAL-1919 basic support for importing and viewing mmCIF... commit | commitdiff
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... commit | commitdiff
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2 commit | commitdiff
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright commit | commitdiff
2015-10-05 Jim ProcterMerge branch 'develop' into Release_2_9_0b1_Branch commit | commitdiff
2015-09-25 tcofoegbuJAL-1907 bugfix for NPE while parsing a features file commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin... commit | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports commit | commitdiff
2015-08-04 tcofoegbuJAL-1816 fixed bug in identify file preventing it from... commit | commitdiff
2015-07-23 tcofoegbuJAL-1819 Test cases for Identify file commit | commitdiff
2015-07-21 tcofoegbuJAL-1443 bugfix to prevent loading of unidentifiable... commit | commitdiff
2015-07-09 tcofoegbuJAL-1806 bug fix to loop through the entire data file... commit | commitdiff
2015-07-08 gmungocJAL-1759 merge from develop commit | commitdiff
2015-07-02 tcofoegbuJAL-1443 data validation for empty content before loadi... commit | commitdiff
2015-06-07 Jim ProcterJAL-653 GFF recognition for identifyFile and format... commit | commitdiff
2015-05-12 tcofoegbuJAL_793 implemented embeding source data in exported... commit | commitdiff
2015-05-11 tcofoegbuJAL-1641 cherry-picked changes into develop compatible... commit | commitdiff
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in... commit | commitdiff
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e... commit | commitdiff
2014-12-22 Jim ProcterMerge: 497958b 68dcaa7 commit | commitdiff
2014-12-15 Jim ProcterJAL-1620 version bump and release notes commit | commitdiff
2014-11-14 Charles OfoegbuHouse keeping commit | commitdiff
2014-11-12 Charles OfoegbuExcluded HtmlFile.java dependencies from AppletFomatAdapter commit | commitdiff
2014-11-06 Charles OfoegbuUpdated BioJs Html to be capable of launching jalivew commit | commitdiff
2014-10-03 Charles OfoegbuIntegration of David Corsars Phylip File support commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting commit | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 commit | commitdiff
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch commit | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header commit | commitdiff
2014-02-20 Jim ProcterMerge branch 'JAL-1447' into develop commit | commitdiff
2014-02-20 Jim ProcterJAL-1447 patch to correctly recognise FASTA files conta... commit | commitdiff
2014-02-18 Jim ProcterMerge branch 'JAL-1445' into develop commit | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices commit | commitdiff
2012-11-15 jproctersource formatting commit | commitdiff
2012-11-15 jprocterMerge branch 'develop' into menard commit | commitdiff
2012-11-08 jproctertidy imports commit | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header commit | commitdiff
2012-10-03 jprocterformatting commit | commitdiff
2012-08-14 Anne Menardlast version stay many bugs .. commit | commitdiff
2012-07-05 Anne MenardAdd support RNAML format commit | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) commit | commitdiff
2011-09-27 jprocterapply version 2.7 copyright commit | commitdiff
2010-10-12 jprocterpatch primary issue causing JAL-664 re testing for... commit | commitdiff
2010-09-23 jprocterJalview 2.6 source licence commit | commitdiff
2010-04-30 jprocterjalview 2.5 release banner commit | commitdiff
2010-03-18 jprocterdisabled simple blast parser for 2.4.1 release commit | commitdiff
2010-03-17 jproctersimple query anchored blast report parser (shh!) commit | commitdiff
2009-08-21 jprocterpir format ambiguity and todo regarding 'format overrid... commit | commitdiff
2009-06-08 jprocterapply gpl development license commit | commitdiff
2008-09-04 jproctermerge from 2_4_Release branch commit | commitdiff
2008-01-29 jprocterensure mark is set before identification is started. commit | commitdiff
2007-10-31 jproctererror message associated with an alignment file loading... commit | commitdiff
2007-07-25 jproctertodo comment commit | commitdiff
2007-05-09 jproctermain method for running from command line and better... commit | commitdiff
2007-04-26 jprocterquick fix for verbose fortranesque comments in preamble... commit | commitdiff
2007-04-17 jprocterrefactored to allow seeks on a FileParse datasource... commit | commitdiff
2007-02-07 amwaterhouseFormatting commit | commitdiff
2007-01-04 amwaterhouseHEADER and ATOM must be position 0 commit | commitdiff
2006-11-14 amwaterhouseSingle seq Blc file detection commit | commitdiff
2006-11-13 amwaterhouseFasta files with * read not identified as BLC commit | commitdiff
2006-08-21 amwaterhouseheader updated commit | commitdiff
2006-08-14 amwaterhouseStockholm parser added commit | commitdiff
2006-07-25 amwaterhousePDB format added commit | commitdiff
2006-05-17 jprocteradded unofficial support for concise output parsing... commit | commitdiff
2006-03-08 amwaterhouseAble to read resources from Zip file commit | commitdiff
2005-12-06 amwaterhouseafter merge commit | commitdiff
2005-09-15 amwaterhouseUse equalsIgnoreCase commit | commitdiff
2005-08-17 amwaterhouseError reply is kept separate from file type commit | commitdiff
2005-06-30 amwaterhouseFormatting changes commit | commitdiff
2005-06-08 amwaterhouseFormatted source commit | commitdiff
next