2 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.0.b2)
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3 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
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5 * This program is free software; you can redistribute it and/or
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6 * modify it under the terms of the GNU General Public License
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7 * as published by the Free Software Foundation; either version 2
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8 * of the License, or (at your option) any later version.
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10 * This program is distributed in the hope that it will be useful,
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11 * but WITHOUT ANY WARRANTY; without even the implied warranty of
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12 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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13 * GNU General Public License for more details.
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15 * You should have received a copy of the GNU General Public License
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16 * along with this program; if not, write to the Free Software
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17 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA
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19 package jalview.schemabinding.version2.descriptors;
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21 // ---------------------------------/
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22 // - Imported classes and packages -/
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23 // ---------------------------------/
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25 import jalview.schemabinding.version2.AlcodonFrame;
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28 * Class AlcodonFrameDescriptor.
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30 * @version $Revision$ $Date$
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32 public class AlcodonFrameDescriptor extends
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33 org.exolab.castor.xml.util.XMLClassDescriptorImpl
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36 // --------------------------/
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37 // - Class/Member Variables -/
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38 // --------------------------/
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41 * Field _elementDefinition.
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43 private boolean _elementDefinition;
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48 private java.lang.String _nsPrefix;
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53 private java.lang.String _nsURI;
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58 private java.lang.String _xmlName;
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60 // ----------------/
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61 // - Constructors -/
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62 // ----------------/
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64 public AlcodonFrameDescriptor()
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67 _nsURI = "www.vamsas.ac.uk/jalview/version2";
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68 _xmlName = "AlcodonFrame";
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69 _elementDefinition = true;
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71 // -- set grouping compositor
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72 setCompositorAsSequence();
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73 org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
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74 org.exolab.castor.mapping.FieldHandler handler = null;
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75 org.exolab.castor.xml.FieldValidator fieldValidator = null;
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76 // -- initialize attribute descriptors
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78 // -- initialize element descriptors
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81 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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82 jalview.schemabinding.version2.Alcodon.class, "_alcodonList",
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83 "alcodon", org.exolab.castor.xml.NodeType.Element);
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84 handler = new org.exolab.castor.xml.XMLFieldHandler()
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86 public java.lang.Object getValue(java.lang.Object object)
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87 throws IllegalStateException
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89 AlcodonFrame target = (AlcodonFrame) object;
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90 return target.getAlcodon();
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93 public void setValue(java.lang.Object object, java.lang.Object value)
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94 throws IllegalStateException, IllegalArgumentException
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98 AlcodonFrame target = (AlcodonFrame) object;
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99 target.addAlcodon((jalview.schemabinding.version2.Alcodon) value);
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100 } catch (java.lang.Exception ex)
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102 throw new IllegalStateException(ex.toString());
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106 public void resetValue(Object object) throws IllegalStateException,
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107 IllegalArgumentException
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111 AlcodonFrame target = (AlcodonFrame) object;
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112 target.removeAllAlcodon();
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113 } catch (java.lang.Exception ex)
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115 throw new IllegalStateException(ex.toString());
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119 public java.lang.Object newInstance(java.lang.Object parent)
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121 return new jalview.schemabinding.version2.Alcodon();
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124 desc.setHandler(handler);
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125 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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126 desc.setMultivalued(true);
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127 addFieldDescriptor(desc);
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129 // -- validation code for: _alcodonList
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130 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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131 fieldValidator.setMinOccurs(0);
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132 { // -- local scope
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134 desc.setValidator(fieldValidator);
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135 // -- _alcodMapList
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136 desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
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137 jalview.schemabinding.version2.AlcodMap.class, "_alcodMapList",
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138 "alcodMap", org.exolab.castor.xml.NodeType.Element);
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139 handler = new org.exolab.castor.xml.XMLFieldHandler()
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141 public java.lang.Object getValue(java.lang.Object object)
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142 throws IllegalStateException
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144 AlcodonFrame target = (AlcodonFrame) object;
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145 return target.getAlcodMap();
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148 public void setValue(java.lang.Object object, java.lang.Object value)
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149 throws IllegalStateException, IllegalArgumentException
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153 AlcodonFrame target = (AlcodonFrame) object;
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155 .addAlcodMap((jalview.schemabinding.version2.AlcodMap) value);
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156 } catch (java.lang.Exception ex)
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158 throw new IllegalStateException(ex.toString());
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162 public void resetValue(Object object) throws IllegalStateException,
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163 IllegalArgumentException
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167 AlcodonFrame target = (AlcodonFrame) object;
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168 target.removeAllAlcodMap();
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169 } catch (java.lang.Exception ex)
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171 throw new IllegalStateException(ex.toString());
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175 public java.lang.Object newInstance(java.lang.Object parent)
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177 return new jalview.schemabinding.version2.AlcodMap();
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180 desc.setHandler(handler);
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181 desc.setNameSpaceURI("www.vamsas.ac.uk/jalview/version2");
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182 desc.setMultivalued(true);
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183 addFieldDescriptor(desc);
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185 // -- validation code for: _alcodMapList
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186 fieldValidator = new org.exolab.castor.xml.FieldValidator();
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187 fieldValidator.setMinOccurs(0);
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188 { // -- local scope
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190 desc.setValidator(fieldValidator);
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198 * Method getAccessMode.
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200 * @return the access mode specified for this class.
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202 public org.exolab.castor.mapping.AccessMode getAccessMode()
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208 * Method getIdentity.
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210 * @return the identity field, null if this class has no identity.
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212 public org.exolab.castor.mapping.FieldDescriptor getIdentity()
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214 return super.getIdentity();
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218 * Method getJavaClass.
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220 * @return the Java class represented by this descriptor.
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222 public java.lang.Class getJavaClass()
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224 return jalview.schemabinding.version2.AlcodonFrame.class;
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228 * Method getNameSpacePrefix.
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230 * @return the namespace prefix to use when marshaling as XML.
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232 public java.lang.String getNameSpacePrefix()
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238 * Method getNameSpaceURI.
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240 * @return the namespace URI used when marshaling and unmarshaling as XML.
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242 public java.lang.String getNameSpaceURI()
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248 * Method getValidator.
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250 * @return a specific validator for the class described by this
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253 public org.exolab.castor.xml.TypeValidator getValidator()
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259 * Method getXMLName.
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261 * @return the XML Name for the Class being described.
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263 public java.lang.String getXMLName()
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269 * Method isElementDefinition.
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271 * @return true if XML schema definition of this Class is that of a global
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272 * element or element with anonymous type definition.
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274 public boolean isElementDefinition()
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276 return _elementDefinition;
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