JAL-2234 rename seqs for linked jalview examples
[jalview.git] / resources /
2016-10-05 Jim ProcterJAL-2189 update year in author.props Release_2_10_0
2016-10-05 Jim ProcterJAL-2189 CITATION file and reorder authors: 2.10: JBP...
2016-10-05 Jim ProcterRevert "JAL-2245 Castor mapping and code changes for...
2016-10-04 gmungocJAL-2245 Castor mapping and code changes for change... bug/JAL-2245enaXmlChange
2016-09-29 gmungocJAL-1856 better warning messages for sequence matching... features/JAL-1856dbRefFetcherMessages
2016-09-29 gmungocJAL-2047 allow title to be shrunk; spelling fix
2016-09-16 gmungocJAL-2183 don't open two free text panels; give input...
2016-08-29 gmungocJAL-1854 checkstyle relocated to /utils, newlines to...
2016-08-29 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-26 gmungocJAL-1854 two more rules, readme notes
2016-08-26 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-26 gmungocJAL-1854 commented FallThrough rule
2016-08-26 gmungocJAL-1854 corrected nested package rule
2016-08-25 gmungocJAL-1854 initial checkstyle config
2016-08-25 gmungocJAL-1424 duplicate key removed
2016-08-24 gmungocJAL-1355 correct 'thereshold' to 'threshold' in message...
2016-08-24 gmungocJAL-1424 removed unused and duplicated message keys
2016-08-18 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-18 gmungocJAL-1693 show warning dialog if unable to make CDS...
2016-08-15 gmungocJAL-1841 better i18n text
2016-08-10 gmungocJAL-2146 show Column no [Sequence no [Residue / pos...
2016-07-18 gmungocJAL-1976 Spanish version of new message
2016-06-20 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-06-20 tcofoegbuJAL-1823 Deleted two obsolete methods in PopupMenu...
2016-06-20 Jim ProcterMerge branch 'develop' into features/JAL-1812_JAL-2083_... features/JAL-1812_JAL-2083_groovyBinding
2016-06-17 tcofoegbuJAL-1823 Updated tooltip to reflect how a specific...
2016-06-17 tcofoegbuJAL-1976 added an intermediate message between a user...
2016-06-16 gmungocJAL-2124 JAL-1990 additional translations
2016-06-15 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-06-15 tcofoegbuJAL-2002 disabled 'Best Uniport Coverage' filter. JAL...
2016-06-15 gmungocJAL-2101 unit test updated to match config file
2016-06-14 tcofoegbuJAL-2102 right justify 'Mass' in uniprot FTS, and ...
2016-06-02 gmungocJAL-2124 additional Spanish text strings
2016-06-02 gmungocJAL-1424 removed duplicate entry and unneeded full...
2016-06-01 gmungocJAL-1424 utility to check resource bundle labels used...
2016-05-31 Jim ProcterMerge branch 'develop' into features/JAL-2113_emblXml1.2
2016-05-26 tcofoegbuJAL-1911 improvement to bugfix - do not save i18n text...
2016-05-26 gmungocJAL-2113 additions to embl_mapping.xml / data models... features/JAL-2113_emblXml1.2
2016-05-20 gmungocJAL-2113 removed classes deleted from mapping
2016-05-20 gmungocJAL-2113 embl_mapping.xml and code updated for EMBL...
2016-05-11 tcofoegbuJAL-1563 updated uniprot FTS config file
2016-05-09 tcofoegbumerge
2016-05-09 tcofoegbuJAL-2101 JAL-2071 JAL-1563 Added fix to enable searchin...
2016-05-09 tcofoegbuJAL-2102 implemented improvement to round FTS's numberi...
2016-05-04 gmungocJAL-2092 hide columns with/without feature
2016-05-03 gmungocJAL-2050 hide introns also when fetching Ensembl xrefs...
2016-05-03 tcofoegbuJAL-1563 JAL-2091 Added generic pagination for FTS...
2016-05-02 tcofoegbuJAL-1563 Fixed Uniprot FTS result-set count error,...
2016-05-02 gmungocJAL-1812 bind Groovy to Jalview rather than Desktop...
2016-04-29 tcofoegbuJAL-1563 Further increased swing timer for search textf...
2016-04-28 tcofoegbuJAL-1563 Increased default response size to 500, and...
2016-04-27 tcofoegbuJAL-1563 Added Id (Uniprot Id) to the dynamic column...
2016-04-27 tcofoegbuJAL-1563 further modificaiton of the uniprot data colum...
2016-04-27 tcofoegbuJAL-1563 Modified Uniprot data column configurations...
2016-04-26 tcofoegbuJAL-1563 reverted to old uniprot fetcher to enable...
2016-04-26 tcofoegbuJAL-2071 changed extension for data column config files
2016-04-25 tcofoegbudevelop merge
2016-04-22 tcofoegbuJAL-1563 JAL-2071 Update and completed implementation...
2016-04-22 tcofoegbuJAL-2071 further refactoring, optimisation, and house...
2016-04-22 gmungocJAL-1812 JAL-2068 add Run Groovy Script to AlignFrame...
2016-04-19 tcofoegbuJAL-2071 architectural improvement for Plugable Free...
2016-04-12 gmungocJAL-2050 only hide introns if exons are present! Remove...
2016-04-11 gmungocJAL-1705 (new preference option to) hide introns when...
2016-03-21 tcofoegbudevelop merge
2016-03-16 gmungocMerge branch 'develop' of https://source.jalview.org...
2016-03-16 tcofoegbuJAL-2028 improvment to the displayed column customisation
2016-03-03 tcofoegbuJAL-1919 PDBfile and JmolParser refactor
2016-02-19 gmungocJAL-1705 refactor show products, set initial split...
2016-02-12 gmungocJAL-2010 simple prototype of 'Highlight Selection'...
2016-02-12 gmungocMerge branch 'develop' into
2016-02-09 tcofoegbuJAL-1976 Added progress indicators for HTML_SVG and...
2016-02-09 tcofoegbuJAL-1975 updated image export pipeline to produce more...
2016-01-28 gmungocJAL-1705 more correct title (CDS not cDNA) on split...
2016-01-28 gmungocMerge branch 'develop' into JAL-1705_trialMerge
2016-01-27 gmungocJAL-1705 use GET for single queries; set gene name...
2015-12-23 gmungocJAL-1191 unzipped OBO file removed
2015-12-23 gmungocJAL-1191 zipped SO OBO file added to /resources, more...
2015-12-22 gmungocJAL-1191 and provide the SO OBO file in /resources :-)
2015-12-22 gmungocJAL-391 new Calculate options to Reverse, Reverse Compl...
2015-12-02 gmungocJAL-1827 reverted text on generic sequence fetcher...
2015-10-22 tcofoegbuJAL-1479 implemented preferences for SIFTs / Needleman...
2015-09-21 gmungocJAL-1892 duplicate entry removed
2015-09-21 gmungocJAL-1892 Spanish additions for Jalview 2.9
2015-09-21 gmungocJAL-1619 obsolete help removed
2015-09-16 gmungocJAL-1859 removed temporary test copy of pdb file
2015-09-16 gmungocJAL-1859 try 1gaq.txt in /lang so it is in the built jar
2015-09-08 tcofoegbudeleted jbake example directory and the old biojs templ...
2015-09-06 Jim ProcterJAL-1645 JAL-1355 UI/i18n: added missing messages,...
2015-09-02 tcofoegbumerge
2015-09-02 tcofoegbuJAL-1805 JAL-1700 house keeping
2015-09-01 gmungocJAL-1355 user error message text externalised
2015-09-01 tcofoegbuJAL-1668 house keeping
2015-08-31 tcofoegbuJAL-1700 updated error handling with suggested improvem...
2015-08-24 tcofoegbuJAL-1641 externalised save_as_biojs_html
2015-08-24 tcofoegbuJAL-1835 corrected Embbed to Embed
2015-08-21 tcofoegbuJAL-1780 changed 'Check All' to 'Select All' and extern...
2015-08-18 tcofoegbuJAL-1835 added UI for BioJSON embbeding preference
2015-08-18 tcofoegbuJAL-1834 added tooltip to the PDB sequence fetcher...
2015-07-30 tcofoegbuJAL-1443 modified exception notifications
2015-07-21 tcofoegbuMerge
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