sequence groups carry their own conservation and consensus annotation rows
[jalview.git] / src / MCview /
2009-06-08 jprocterapply gpl development license
2009-06-08 jprocterpatch for wierd format header lines and apply gpl devel...
2008-09-04 jproctermerge from 2_4_Release branch
2008-01-29 jprocterFileParse object can be re-used to read different files...
2007-11-16 jprocterrefactored ebi soap client and AbstractSequenceFetcher...
2007-10-27 jprocterenabled platform dependent embedding of menuBar with...
2007-07-13 jprocterrefactor
2007-06-17 jprocterfix modeller generated PDB file reading bug (missing...
2007-05-14 amwaterhouseInvert mouse drag controls
2007-05-08 amwaterhousemirror image recitified
2007-05-07 amwaterhouseDont use gold colouring for highlight
2007-05-07 amwaterhouseUse PDB id for grouping mappings
2007-05-07 amwaterhousePDBViewer available if necessary
2007-05-01 amwaterhouseset chains available
2007-04-30 amwaterhousesetVisible replaces show
2007-04-27 amwaterhouseFeatureRenderer mixups fixed
2007-04-27 amwaterhouseRemove system.out AppletPDBViewer.java
2007-04-27 amwaterhouseTrouble with featureRenderers fixed
2007-04-25 jproctertransfer of residue numbering as alignment annotation
2007-04-23 amwaterhousegetColour method added
2007-04-20 jprocteradds annotation for display (with flag to set alignment...
2007-04-19 jproctertfactor annotation description includes full sequenceID
2007-04-19 jproctertfactor and occupancy extracted from PDB file, and...
2007-04-18 amwaterhouseRedundant code commented out
2007-04-11 amwaterhousefeatureAdded not in applet
2007-04-02 jprocterfr==null check.
2007-03-26 jprocterPDB residue numberings transfered and alignment view...
2007-03-22 amwaterhouseCommented out userDefColours for compilation. Class...
2007-02-27 amwaterhouseNo longer use ref to seqcanvas for painting
2007-02-27 amwaterhouseblank space for chain name if empty
2007-02-27 amwaterhousekeep record of atomIndeX
2007-02-12 amwaterhouse>0 rather than -1 check
2007-02-12 jproctertranfer pdbresno features to dataset sequence.
2007-02-07 amwaterhouseformatting
2007-02-01 amwaterhousefind colours uncommented
2007-02-01 amwaterhousesequence.getStart() in findTrueIndex
2007-01-23 jproctertransfer resnum features now returns features (could...
2007-01-19 jprocterPDBChain maintains reference to dataset of sequences...
2007-01-18 jproctertransfer and update of sequenceFeatures for associated...
2007-01-18 jproctertransfer and update of sequenceFeatures for associated...
2007-01-18 jprocterfixed last-residue bug and added sequence feature creat...
2007-01-18 jprocteradded resNum+insCode string field for truly unambiguous...
2007-01-17 jproctermade atom attributes public (rather than put in get...
2006-12-21 amwaterhousegetSequenceAsString
2006-12-05 amwaterhousesequence is char []
2006-11-20 amwaterhouseMemory check on PDB file
2006-08-21 amwaterhouseheader updated
2006-08-11 amwaterhousePrintstacktrace
2006-08-11 amwaterhouseinFile might be null if PDB was pasted
2006-07-27 amwaterhouseNOR the <pre> tabs
2006-07-27 amwaterhouseSave PDB file to disk
2006-07-26 amwaterhousePDB file MUST have an id
2006-07-26 jprocterIgnore list created
2006-07-25 amwaterhouseExtends AlignFile, dataset has PDBEntry added
2006-07-25 amwaterhouseCan load PDB file from disk
2006-07-07 amwaterhouseChangeable background colour
2006-07-07 amwaterhouseMake sure bond has a colour
2006-07-07 amwaterhouseMake sure atom has a colour
2006-06-23 amwaterhouse++ --
2006-03-24 amwaterhouseHas its own featureRenderer
2006-03-24 amwaterhouseZSort no longer static
2006-03-24 amwaterhouseHas own featurerenderer
2006-03-08 amwaterhouseCan read from zip file
2006-03-01 jprocterpropagate SearchResult object use to MCView's highlight...
2005-12-22 amwaterhouseJar file 20% smaller
2005-12-09 jprocterfixed pdbentry creation and multiple uniprot or pdb...
2005-12-09 amwaterhouseApplet Structure viewer has all colours available
2005-12-09 amwaterhouseAll colours added to Structure viewer
2005-12-08 amwaterhouseSeqColoursReady
2005-12-08 amwaterhouseSeqColoursReady boolean added
2005-12-08 amwaterhouseEqualsignoreCase
2005-12-07 amwaterhouseLicense added to new files
2005-12-06 amwaterhousePDB structure viewer updated
2005-09-30 amwaterhouseRemove redundancy from Eclipse
2005-06-15 amwaterhouseTooltip changed
2005-06-08 amwaterhouseFormatted source
2005-06-08 amwaterhouseGPL license added
2005-06-08 amwaterhouse*** empty log message ***
2005-05-25 jproctertidied up system.out messages and moved many to stderr.
2005-05-05 amwaterhousepdb end seq and startseq determined here
2005-05-05 amwaterhousecolour by sequence just about works
2005-05-05 amwaterhouseaddelement replaces add
2005-03-23 amwaterhousedrawableSequence removed
2005-02-04 amwaterhouseSequenceFeature display added
2004-11-18 amwaterhouseNew files