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fix aligned DNA codon translation bug(s) and generate AlignedCodonFrame mappings...
[jalview.git]
/
src
/
jalview
/
analysis
/
Conservation.java
2007-02-07
amwaterhouse
Formatting
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2007-01-30
amwaterhouse
Any character non aa or nucleotide is a space
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2006-12-14
amwaterhouse
one less cast
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2006-12-05
amwaterhouse
sequence is char []
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2006-11-07
amwaterhouse
warning note added to consequence
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2006-11-06
amwaterhouse
If start is not zero, we need to put -- at the start
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2006-10-26
amwaterhouse
Error message changed
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2006-10-11
jprocter
fixes exception (array index out of bounds - due to...
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2006-10-10
amwaterhouse
Optimized
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2006-08-21
amwaterhouse
header updated
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2006-04-10
amwaterhouse
dont need to set - to -
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2006-04-07
amwaterhouse
Set all gaps to - symbol
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2005-08-18
amwaterhouse
Character methods don't exist in java 1.1
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2005-08-18
jprocter
various case sensitivity bugs fixed in residue comparis...
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2005-08-15
amwaterhouse
Declare variables outside loops
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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2005-05-03
amwaterhouse
1.1 compatible
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2005-04-11
jprocter
added the alignment quality calculation from the old...
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2005-04-08
jprocter
remember: do not check in quick bug fixes that you...
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2005-04-08
jprocter
Alignment quality with funky coloured histograms.
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2005-03-23
amwaterhouse
drawableSequence removed
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2004-12-15
amwaterhouse
isGap method added to utils
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2004-12-14
amwaterhouse
Hastable is not used anywhere
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2004-12-14
amwaterhouse
Hashtable size must allow for total-start
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2004-11-16
amwaterhouse
Removed spaces
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2004-11-02
amwaterhouse
Jalview Imported Sources
start
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