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[jalview.git]
/
src
/
jalview
/
analysis
/
Conservation.java
2011-10-21
jprocter
static convenience methods for constructing and calcula...
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2011-10-21
jprocter
use List rather than Vector
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2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-10-04
jprocter
Merge remote-tracking branch 'remotes/origin/2_5_1_rna_...
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2011-09-27
jprocter
apply version 2.7 copyright
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2011-07-29
janengelhardt
JAL-885; Implementation of StructureFrequency.java...
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2011-02-18
jprocter
fix for occasional race conditions
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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2009-08-21
jprocter
1.1 compatibility
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2009-08-21
jprocter
start/stop for per-group consensus calculation
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2009-07-24
jprocter
complete alignment annotation row procedure
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2009-06-08
jprocter
apply gpl development license
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2008-09-04
jprocter
merge from 2_4_Release branch
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2008-04-10
jprocter
quick fix for conservation calculation when residue...
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2007-02-07
amwaterhouse
Formatting
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2007-01-30
amwaterhouse
Any character non aa or nucleotide is a space
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2006-12-14
amwaterhouse
one less cast
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2006-12-05
amwaterhouse
sequence is char []
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2006-11-07
amwaterhouse
warning note added to consequence
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2006-11-06
amwaterhouse
If start is not zero, we need to put -- at the start
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2006-10-26
amwaterhouse
Error message changed
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2006-10-11
jprocter
fixes exception (array index out of bounds - due to...
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2006-10-10
amwaterhouse
Optimized
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2006-08-21
amwaterhouse
header updated
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2006-04-10
amwaterhouse
dont need to set - to -
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2006-04-07
amwaterhouse
Set all gaps to - symbol
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2005-08-18
amwaterhouse
Character methods don't exist in java 1.1
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2005-08-18
jprocter
various case sensitivity bugs fixed in residue comparis...
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2005-08-15
amwaterhouse
Declare variables outside loops
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2005-06-30
amwaterhouse
Formatting changes
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2005-06-08
amwaterhouse
Formatted source
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2005-06-08
amwaterhouse
GPL license added
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2005-05-25
jprocter
tidied up system.out messages and moved many to stderr.
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2005-05-03
amwaterhouse
1.1 compatible
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2005-04-11
jprocter
added the alignment quality calculation from the old...
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2005-04-08
jprocter
remember: do not check in quick bug fixes that you...
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2005-04-08
jprocter
Alignment quality with funky coloured histograms.
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2005-03-23
amwaterhouse
drawableSequence removed
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2004-12-15
amwaterhouse
isGap method added to utils
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2004-12-14
amwaterhouse
Hastable is not used anywhere
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2004-12-14
amwaterhouse
Hashtable size must allow for total-start
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2004-11-16
amwaterhouse
Removed spaces
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2004-11-02
amwaterhouse
Jalview Imported Sources
start
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