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JAL-629 Firm up bootstrapArgs. Correct '-colour' in test. Separate --headless and...
[jalview.git]
/
src
/
jalview
/
api
/
analysis
/
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 add GPL to main sources
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-05-16
gmungoc
JAL-2403 simplify instantiation / configuration of...
tree
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commitdiff
2017-04-11
gmungoc
JAL-2403 improved ScoreModelI hierarchy as per Kira...
tree
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commitdiff
2017-03-27
gmungoc
JAL-2416 add score model description field for tooltip...
tree
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commitdiff
2017-03-24
gmungoc
JAL-2428 simplify TreeModel constructors, add getOrigin...
tree
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commitdiff
2017-03-23
gmungoc
JAL-2393 code tidy and comments, PIDDistanceModel depre...
tree
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commitdiff
2017-02-28
gmungoc
JAL-1632 'includeGaps' applied to FeatureDistanceModel...
tree
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commitdiff
2017-02-27
gmungoc
JAL-838 ScoreMatrix now respects SimilarityParams!
tree
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commitdiff
2017-02-24
gmungoc
JAL-838 added 'SeqSpace' PID mode, added parameters...
tree
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commitdiff
2017-02-24
gmungoc
JAL-838 first version of PID parameters model
tree
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commitdiff
2017-02-23
gmungoc
JAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
tree
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commitdiff
2017-02-20
gmungoc
JAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix...
tree
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commitdiff
2017-02-13
gmungoc
JAL-1632 first cut of Tree chooser dialog and ScoreMode...
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
basic house keeping
tree
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commitdiff
2014-12-15
Jim Procter
JAL-1620 version bump and release notes
tree
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commitdiff
2014-08-08
j.procter@dundee...
formatting/typo
tree
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commitdiff
2014-06-13
Jim Procter
Merge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
tree
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commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
tree
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commitdiff
2014-04-21
Jim Procter
JAL-1483 interface to allow score model to be parameter...
tree
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commitdiff
2014-04-21
Jim Procter
JAL-1473 refactor score matrices and tree score calcula...
tree
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commitdiff