JAL-629 Firm up bootstrapArgs. Correct '-colour' in test. Separate --headless and...
[jalview.git] / src / jalview / api / analysis /
2017-10-03 gmungocJAL-2738 copy to spikes/mungo
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources
2017-08-16 Jim ProcterJAL-2418 source formatting
2017-06-09 gmungocJAL-2446 merged to spike branch
2017-05-16 gmungocJAL-2403 simplify instantiation / configuration of...
2017-04-11 gmungocJAL-2403 improved ScoreModelI hierarchy as per Kira...
2017-03-27 gmungocJAL-2416 add score model description field for tooltip...
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin...
2017-03-23 gmungocJAL-2393 code tidy and comments, PIDDistanceModel depre...
2017-02-28 gmungocJAL-1632 'includeGaps' applied to FeatureDistanceModel...
2017-02-27 gmungocJAL-838 ScoreMatrix now respects SimilarityParams!
2017-02-24 gmungocJAL-838 added 'SeqSpace' PID mode, added parameters...
2017-02-24 gmungocJAL-838 first version of PID parameters model
2017-02-23 gmungocJAL-2403 JAL-1483 changes to ScoreModelI hierarchy...
2017-02-20 gmungocJAL-2403 ScoreModelI now DistanceModelI, ScoreMatrix...
2017-02-13 gmungocJAL-1632 first cut of Tree chooser dialog and ScoreMode...
2016-10-25 Jim ProcterJAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch
2015-10-16 Jim ProcterJAL-1925 update source version in license Release_2_9_0b2
2015-10-08 Jim ProcterJAL-1894 update year/version in copyright
2015-09-10 Jim ProcterJAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports
2015-03-06 Jim ProcterJAL-1683 replace year/version strings with tokens in...
2015-03-06 Jim ProcterMerge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
2015-01-20 Charles Ofoegbuclean up
2015-01-20 Charles Ofoegbuclean up
2015-01-20 Charles Ofoegbubasic house keeping
2014-12-15 Jim ProcterJAL-1620 version bump and release notes
2014-08-08 j.procter@dundee... formatting/typo
2014-06-13 Jim ProcterMerge branch 'Release_2_8_2_Branch' into JAL-1483_featu...
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2
2014-04-21 Jim ProcterJAL-1483 interface to allow score model to be parameter...
2014-04-21 Jim ProcterJAL-1473 refactor score matrices and tree score calcula...