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JAL-958 flag indicating if visualization settings for new group annotation should...
[jalview.git]
/
src
/
jalview
/
appletgui
/
2005-12-12
amwaterhouse
Getmask is slightly wider
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commitdiff
2005-12-09
amwaterhouse
Change order of repaint if wrapped
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commitdiff
2005-12-09
amwaterhouse
Applet Structure viewer has all colours available
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commitdiff
2005-12-09
amwaterhouse
Keylistener added to frame and seqcanvas
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commitdiff
2005-12-08
amwaterhouse
Should call deselectAll when escape pressed
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commitdiff
2005-12-08
amwaterhouse
Dont repaint if component has been removed
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commitdiff
2005-12-06
amwaterhouse
after merge
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commitdiff
2005-09-30
amwaterhouse
Remove redundancy in Eclipse
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commitdiff
2005-09-28
amwaterhouse
Applet frame name
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commitdiff
2005-09-28
amwaterhouse
Put clip back in
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commitdiff
2005-09-28
amwaterhouse
Wrap alignment with annotations
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commitdiff
2005-09-22
amwaterhouse
Dont calculate conservation for nucleotides
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commitdiff
2005-09-22
amwaterhouse
Create instance of FormatAdapter
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commitdiff
2005-09-22
amwaterhouse
Display nucleotides
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commitdiff
2005-09-22
amwaterhouse
Break if regex not found
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commitdiff
2005-09-21
amwaterhouse
Sequences must be aligned before PCA
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commitdiff
2005-09-20
amwaterhouse
Checks end of sequence before drawing text
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commitdiff
2005-09-20
amwaterhouse
Format label left align
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commitdiff
2005-09-20
amwaterhouse
Optimise copy image
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commitdiff
2005-09-20
amwaterhouse
PCAPanel checks viewport selection group
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commitdiff
2005-09-20
amwaterhouse
PCAPanel checks viewport selection
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commitdiff
2005-09-15
amwaterhouse
Applet has main method, excutable
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commitdiff
2005-09-12
amwaterhouse
Remove gaps in regions, not char by char
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commitdiff
2005-09-12
amwaterhouse
null pointers removed
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commitdiff
2005-09-12
amwaterhouse
Update overview in alignmentChanged
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commitdiff
2005-09-12
amwaterhouse
Size checking in drawGraph
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commitdiff
2005-09-12
amwaterhouse
Overview subsamples alignment
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commitdiff
2005-09-08
amwaterhouse
Only 1 NJtree
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commitdiff
2005-09-08
amwaterhouse
TreePanel takes viewport
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commitdiff
2005-09-08
amwaterhouse
Init PCA in thread
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commitdiff
2005-09-08
amwaterhouse
Optimised for wide alignments
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commitdiff
2005-09-08
amwaterhouse
Load in a thread
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commitdiff
2005-09-02
amwaterhouse
Applet search by residue index fixed
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commitdiff
2005-09-01
amwaterhouse
Need reference to mainApplet
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commitdiff
2005-09-01
amwaterhouse
Use propertyListener for alignment edits
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commitdiff
2005-09-01
amwaterhouse
No need to recalculate image for font change
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commitdiff
2005-08-31
amwaterhouse
Repaint scale panel after unselect all
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commitdiff
2005-08-31
amwaterhouse
Must update globalColourScheme with new consensus
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commitdiff
2005-08-30
amwaterhouse
UserColour gui modified
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commitdiff
2005-08-30
amwaterhouse
Validate buttons and fire on mouse press, not mouse...
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commitdiff
2005-08-30
amwaterhouse
Set user colours same as global
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commitdiff
2005-08-30
amwaterhouse
Wrapped, getWidth > vconsensus
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commitdiff
2005-08-30
amwaterhouse
Update colours after remove left, cut, paste
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commitdiff
2005-08-30
amwaterhouse
Keep mouse drag to 1 block when wrapped
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commitdiff
2005-08-30
amwaterhouse
Set startSeq 0 if wrap alignment
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commitdiff
2005-08-30
amwaterhouse
Dont set clip if its not null
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commitdiff
2005-08-30
amwaterhouse
Bounds checking
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commitdiff
2005-08-30
amwaterhouse
If Mac, dont use fastpaint
Release_2_05
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commitdiff
2005-08-29
amwaterhouse
Reset all colour schemes after gaps removed
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commitdiff
2005-08-29
amwaterhouse
Keep startRes the same after removing columns
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commitdiff
2005-08-29
amwaterhouse
Reset ClustalX after removing gaps
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commitdiff
2005-08-29
amwaterhouse
if seq<0, return
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commitdiff
2005-08-29
amwaterhouse
Dont call fastPaint if Mac
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commitdiff
2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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commitdiff
2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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commitdiff
2005-08-26
amwaterhouse
resizeAgain flag set if user resizes whilst image is...
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commitdiff
2005-08-24
amwaterhouse
Set new group width-1
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commitdiff
2005-08-24
amwaterhouse
Give extra pixel for graph values
Release_2_04
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commitdiff
2005-08-24
amwaterhouse
Set threshold 0 if conservation
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commitdiff
2005-08-24
amwaterhouse
Does edit affect any groups?
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commitdiff
2005-08-23
amwaterhouse
End res of selection group corrected
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commitdiff
2005-08-23
amwaterhouse
Add windowListener in constructor
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commitdiff
2005-08-23
amwaterhouse
Remove ref in PaintRefresher on close, changeColour...
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commitdiff
2005-08-22
amwaterhouse
Check for null colour
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commitdiff
2005-08-22
amwaterhouse
Conservation colour scheme is no more
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commitdiff
2005-08-17
amwaterhouse
Read in version from build details file in applet jar
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commitdiff
2005-08-17
amwaterhouse
Capitalise menus
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commitdiff
2005-08-17
amwaterhouse
Calculation - consensus
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commitdiff
2005-08-15
amwaterhouse
IgnoreGapsConsensus
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commitdiff
2005-08-09
amwaterhouse
Applet handles multiple sequence links
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commitdiff
2005-08-03
amwaterhouse
Version 2.02
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commitdiff
2005-07-29
amwaterhouse
Remove ref to ServletGUI
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commitdiff
2005-07-29
amwaterhouse
Correct label for end res in copy
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commitdiff
2005-07-18
amwaterhouse
Copy seq ordering bug fixed
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commitdiff
2005-07-11
amwaterhouse
Must check if group.sequences are null in remove gaps
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commitdiff
2005-07-11
amwaterhouse
check groupsize is non zero
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commitdiff
2005-07-11
amwaterhouse
Release and build date methods changed
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commitdiff
2005-07-07
amwaterhouse
press del to cut
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commitdiff
2005-07-07
amwaterhouse
delete markers from start to end
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commitdiff
2005-07-07
amwaterhouse
Remove all gaps must check jSize
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commitdiff
2005-07-06
amwaterhouse
Help file url changed
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commitdiff
2005-07-06
amwaterhouse
dont add null group
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commitdiff
2005-06-30
amwaterhouse
Formatting changes
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commitdiff
2005-06-16
amwaterhouse
dont add sequence twice to new group
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commitdiff
2005-06-16
amwaterhouse
Sort Groups modified
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commitdiff
2005-06-16
amwaterhouse
remove gaps applies to selected area
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commitdiff
2005-06-15
amwaterhouse
add/remove updated
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commitdiff
2005-06-14
amwaterhouse
Dont delete nextSeq
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commitdiff
2005-06-13
amwaterhouse
clustal probs
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commitdiff
2005-06-13
amwaterhouse
PaintRefresh changed
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commitdiff
2005-06-09
amwaterhouse
Warn if Textarea limit has been reached
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commitdiff
2005-06-08
amwaterhouse
group recalc conserve
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commitdiff
2005-06-08
amwaterhouse
recalc group conserve
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commitdiff
2005-06-08
amwaterhouse
Formatted source
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commitdiff
2005-06-08
amwaterhouse
GPL license added
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commitdiff
2005-06-08
amwaterhouse
Add email to about
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commitdiff
2005-05-27
amwaterhouse
Remove desc for conserve graph
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commitdiff
2005-05-26
amwaterhouse
check for null residues
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commitdiff
2005-05-25
amwaterhouse
more clustalx bugs fixed
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commitdiff
2005-05-25
amwaterhouse
usercolourscheme changed
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commitdiff
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