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JAL-654 remove any annotation rows for chain specific query
[jalview.git] / src / jalview / appletgui /
2012-07-01 jprocterensure all annotation dependent rendering gets refreshed tree | commitdiff
2012-06-15 jprocterfix JAL-1122 tree | commitdiff
2012-06-15 jprocterJAL-535 - refactored core PCA viewer code to viewmodel tree | commitdiff
2012-06-15 jprocterJAL-535 refactored core code from PCA viewer to viewmodel. tree | commitdiff
2012-06-15 jprocterMerge branch 'JAL-1013_pca_rna_dna' into develop tree | commitdiff
2012-06-13 jprocterjavatidy tree | commitdiff
2012-06-12 jprocterJAL-1115 refactor reordering code operating directly... tree | commitdiff
2012-06-12 jprocterJAL-1115 refactor base collection for Alignment from... tree | commitdiff
2012-06-07 jprocterjavatidy tree | commitdiff
2012-06-07 jprocterJAL-967, JAL-1114, JAL-1115 - modified render and calcu... tree | commitdiff
2012-05-31 jprocterformatting tree | commitdiff
2012-05-30 jprocterJAL-969 - refactor colourscheme machinery from GUI... tree | commitdiff
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta... tree | commitdiff
2012-05-24 jprocterpatch for occasional NPE when applet is quit tree | commitdiff
2012-05-23 jprocterJAL-1078 - extend applet cut'n'paste features/annotatio... tree | commitdiff
2012-05-23 jprocterJAL-1067, JAL-1105 - refactor parser to fit Jalview... tree | commitdiff
2012-05-23 jprocterJAL-1102 todos and status updates when data is added tree | commitdiff
2012-05-23 jproctertodo JAL-1104 : functions to refactor tree | commitdiff
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065... tree | commitdiff
2012-05-16 jprocterwarning dialog - fixes JAL-1099 tree | commitdiff
2011-12-08 jprocter(JAL-1013) specify sequence type to ensure PCA calculat... tree | commitdiff
2011-12-08 jprocterreorder fields to match application tree | commitdiff
2011-11-04 jprocterMerge branch 'JAL-980_jmol_patch' into develop tree | commitdiff
2011-11-04 jprocter(JAL-980,JAL-982) - applet console only allows console... tree | commitdiff
2011-11-04 jprocter(JAL-980) update binding for refactored Jmol constants... tree | commitdiff
2011-10-28 jprocter(JAL-885) RNA helix and purine pyrimidine colouring... tree | commitdiff
2011-10-28 jprocterJAL-969 - refactor initialisation of automatic annotati... tree | commitdiff
2011-10-28 jprocterJAL-902 structure conservation row for applet tree | commitdiff
2011-10-28 jprocter(JAL-970) interactive editing of RNA helix annotation... tree | commitdiff
2011-10-28 jprocter(JAL-889) ensure annotation row is revalidated after... tree | commitdiff
2011-10-27 jprocter(JAL-969) efficiency tree | commitdiff
2011-10-27 jprocter(JAL-969) removed TODOs tree | commitdiff
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to... tree | commitdiff
2011-10-27 jprocter(JAL-967) ensure annotation panel is rendered with... tree | commitdiff
2011-10-21 jprocterRefactored alignment viewport to use common base, exten... tree | commitdiff
2011-10-21 jprocterextend alignPanel api with OOMHandler call to raise... tree | commitdiff
2011-10-21 jprocterMerge branch 'Release_2_7_Branch_hotfix_JAL-962' into... tree | commitdiff
2011-10-21 jprocter(JAL-965) new api methods to allow features to be loade... tree | commitdiff
2011-10-21 jprocter(JAL-962) allow group visibility to be specified before... tree | commitdiff
2011-10-14 jprocter(JAL-958) - normalised sequence logo for applet tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_... tree | commitdiff
2011-09-27 jprocterbackout overzealous logic disabling feature links in... tree | commitdiff
2011-09-27 jprocterNPE fix tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort... tree | commitdiff
2011-09-14 jprocterJAL-234 - default button to reset min/max colours and... tree | commitdiff
2011-08-30 jprocterpatch for JAL-731 tree | commitdiff
2011-08-30 jprocterpatch for JAL-729 - NPE avoided and cut and paste impor... tree | commitdiff
2011-08-30 jprocterJAL-915 - ensured that exceptions are not raised in... tree | commitdiff
2011-08-19 jprocterJAL-908,JAL-701 - patch applet to strip HTML tags from... tree | commitdiff
2011-08-15 jprocterJAL-750 - automaticScrolling=true by default. Refactore... tree | commitdiff
2011-08-15 jprocterJAL-904 added scrollToRow and scrollToColumn methods... tree | commitdiff
2011-07-28 jprocteradded 'since 2.x notes to parameters'. User configurabl... tree | commitdiff
2011-07-25 janengelhardt'Fix Group Colour bug' merge; JAL-580 tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-07-22 jprocterensure propagation of colour change on annotation updat... tree | commitdiff
2011-07-22 jprocterfix NPE when annotation colourgradient is applied tree | commitdiff
2011-07-22 jprocterdefault parameter for colours in annotation shading... tree | commitdiff
2011-07-18 jprocterfixed mouseover problem - still need to deal with flick... tree | commitdiff
2011-07-05 jprocterRevert "partial patch for JAL-411 - text rendered above... tree | commitdiff
2011-07-05 jprocterpartial patch for JAL-411 - text rendered above features tree | commitdiff
2011-07-05 jprocterRevert "Revert "needed for linkedapplets_ng.html (JAL... tree | commitdiff
2011-07-05 jprocterRevert "needed for linkedapplets_ng.html (JAL-859,JAL... tree | commitdiff
2011-07-05 jprocterneeded for linkedapplets_ng.html (JAL-859,JAL-469) tree | commitdiff
2011-07-05 jprocterwhole frame should be validated. tree | commitdiff
2011-06-30 jprocterset initial annotation panel height appropriately ... tree | commitdiff
2011-06-29 jprocterrepaint image buffer height change (JAL-564) and ensure... tree | commitdiff
2011-06-29 jprocterrepaint image buffer resize when panel height changes... tree | commitdiff
2011-06-29 jprocterpreliminary patch to reduce problem observed in JAL-546 tree | commitdiff
2011-06-29 jprocterensure annotation height adjuster doesn't disappear... tree | commitdiff
2011-05-17 jprocterrefactor to allow distinct StructureSelectionManager... tree | commitdiff
2011-05-05 jprocterjavadoc and informative error message when external... tree | commitdiff
2011-04-25 jprocterJAL-824 - ensure Jmol colouring is a radio button tree | commitdiff
2011-04-22 jprocteroption for enabling Jmol colouring mode JAL-824 tree | commitdiff
2011-04-21 jproctermoved to same place as in jalview.gui tree | commitdiff
2011-02-27 jprocterpatch for occasional ArrayIndexOutOfBounds tree | commitdiff
2011-02-27 jprocterpatch for JAL-792 tree | commitdiff
2011-02-25 jprocterfirst approximation for JAL-782 - hint that opaque... tree | commitdiff
2011-02-18 jprocterfix scrolltoposition behaviour and new alignmentPanel api tree | commitdiff
2011-02-18 jprocterfix scrolltoposition behaviour tree | commitdiff
2011-02-18 jproctercall to release any explicit event handler references tree | commitdiff
2011-02-14 jprocterJAL-769 tree | commitdiff
2011-02-14 jprocterJAL-564 (annotation panel height adjustment) and alignm... tree | commitdiff
2011-02-14 jprocterJAL-621 (mouseover debugging) and JAL-564 (annotation... tree | commitdiff
2011-02-14 jprocterJAL-621 and JAL-564 tree | commitdiff
2011-02-14 jprocterJAL-621 - also renamed list of javascript handlers tree | commitdiff
2011-02-14 jprocterrefactored annotation panel height calculation tree | commitdiff
2011-02-04 jprocter1.2ish awt methods tree | commitdiff
2011-02-04 jprocter1.2ish awt methods and excluding unused code tree | commitdiff
2011-02-04 jprocterdon't need to retrieve idwidthadjuster tree | commitdiff
2011-02-04 jprocterpatch for JAL-760 tree | commitdiff
2011-02-04 jproctergroup associated annotation and logos JAL-516 JAL-759 tree | commitdiff
2011-02-04 jprocteradjustable annotation panel height and vertical scrollb... tree | commitdiff
2011-01-21 jproctersearch result highlighting and scrolling and some patch... tree | commitdiff
2011-01-21 jproctermore efficient highlighting and selection display JAL-469 tree | commitdiff
2011-01-21 jprocterrelaxed ID matching parameter JAL-753 and sortBy JAL-754 tree | commitdiff
2011-01-18 jprocterpatch for JAL-695 - need to test if this is observed... tree | commitdiff
2011-01-18 jprocterrefactored VamsasListener to allow the source of the... tree | commitdiff
2011-01-17 jprocteruse local reference for current target frame as set... tree | commitdiff
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