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(JAL-972) format tweak for source information box
[jalview.git]
/
src
/
jalview
/
appletgui
/
2011-11-04
jprocter
Merge branch 'JAL-980_jmol_patch' into develop
tree
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commitdiff
2011-11-04
jprocter
(JAL-980,JAL-982) - applet console only allows console...
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commitdiff
2011-11-04
jprocter
(JAL-980) update binding for refactored Jmol constants...
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commitdiff
2011-10-28
jprocter
(JAL-885) RNA helix and purine pyrimidine colouring...
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commitdiff
2011-10-28
jprocter
JAL-969 - refactor initialisation of automatic annotati...
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commitdiff
2011-10-28
jprocter
JAL-902 structure conservation row for applet
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commitdiff
2011-10-28
jprocter
(JAL-970) interactive editing of RNA helix annotation...
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commitdiff
2011-10-28
jprocter
(JAL-889) ensure annotation row is revalidated after...
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commitdiff
2011-10-27
jprocter
(JAL-969) efficiency
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commitdiff
2011-10-27
jprocter
(JAL-969) removed TODOs
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commitdiff
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
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commitdiff
2011-10-27
jprocter
(JAL-967) ensure annotation panel is rendered with...
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commitdiff
2011-10-21
jprocter
Refactored alignment viewport to use common base, exten...
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commitdiff
2011-10-21
jprocter
extend alignPanel api with OOMHandler call to raise...
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commitdiff
2011-10-21
jprocter
Merge branch 'Release_2_7_Branch_hotfix_JAL-962' into...
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commitdiff
2011-10-21
jprocter
(JAL-965) new api methods to allow features to be loade...
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commitdiff
2011-10-21
jprocter
(JAL-962) allow group visibility to be specified before...
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commitdiff
2011-10-14
jprocter
(JAL-958) - normalised sequence logo for applet
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
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commitdiff
2011-10-04
jprocter
Merge remote-tracking branch 'remotes/origin/2_5_1_rna_...
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commitdiff
2011-09-27
jprocter
backout overzealous logic disabling feature links in...
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commitdiff
2011-09-27
jprocter
NPE fix
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commitdiff
2011-09-27
jprocter
apply version 2.7 copyright
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commitdiff
2011-09-16
jprocter
JAL-468 JAL-936 sort alignment by tree and autosort...
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commitdiff
2011-09-14
jprocter
JAL-234 - default button to reset min/max colours and...
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commitdiff
2011-08-30
jprocter
patch for JAL-731
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commitdiff
2011-08-30
jprocter
patch for JAL-729 - NPE avoided and cut and paste impor...
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commitdiff
2011-08-30
jprocter
JAL-915 - ensured that exceptions are not raised in...
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commitdiff
2011-08-19
jprocter
JAL-908,JAL-701 - patch applet to strip HTML tags from...
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commitdiff
2011-08-15
jprocter
JAL-750 - automaticScrolling=true by default. Refactore...
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commitdiff
2011-08-15
jprocter
JAL-904 added scrollToRow and scrollToColumn methods...
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commitdiff
2011-07-28
jprocter
added 'since 2.x notes to parameters'. User configurabl...
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commitdiff
2011-07-25
janengelhardt
'Fix Group Colour bug' merge; JAL-580
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commitdiff
2011-07-25
janengelhardt
Start merging of Laurens Code
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commitdiff
2011-07-22
jprocter
ensure propagation of colour change on annotation updat...
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commitdiff
2011-07-22
jprocter
fix NPE when annotation colourgradient is applied
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commitdiff
2011-07-22
jprocter
default parameter for colours in annotation shading...
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commitdiff
2011-07-18
jprocter
fixed mouseover problem - still need to deal with flick...
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commitdiff
2011-07-05
jprocter
Revert "partial patch for JAL-411 - text rendered above...
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commitdiff
2011-07-05
jprocter
partial patch for JAL-411 - text rendered above features
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commitdiff
2011-07-05
jprocter
Revert "Revert "needed for linkedapplets_ng.html (JAL...
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commitdiff
2011-07-05
jprocter
Revert "needed for linkedapplets_ng.html (JAL-859,JAL...
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commitdiff
2011-07-05
jprocter
needed for linkedapplets_ng.html (JAL-859,JAL-469)
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commitdiff
2011-07-05
jprocter
whole frame should be validated.
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commitdiff
2011-06-30
jprocter
set initial annotation panel height appropriately ...
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commitdiff
2011-06-29
jprocter
repaint image buffer height change (JAL-564) and ensure...
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commitdiff
2011-06-29
jprocter
repaint image buffer resize when panel height changes...
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commitdiff
2011-06-29
jprocter
preliminary patch to reduce problem observed in JAL-546
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commitdiff
2011-06-29
jprocter
ensure annotation height adjuster doesn't disappear...
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commitdiff
2011-05-17
jprocter
refactor to allow distinct StructureSelectionManager...
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commitdiff
2011-05-05
jprocter
javadoc and informative error message when external...
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commitdiff
2011-04-25
jprocter
JAL-824 - ensure Jmol colouring is a radio button
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commitdiff
2011-04-22
jprocter
option for enabling Jmol colouring mode JAL-824
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commitdiff
2011-04-21
jprocter
moved to same place as in jalview.gui
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commitdiff
2011-02-27
jprocter
patch for occasional ArrayIndexOutOfBounds
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commitdiff
2011-02-27
jprocter
patch for JAL-792
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commitdiff
2011-02-25
jprocter
first approximation for JAL-782 - hint that opaque...
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commitdiff
2011-02-18
jprocter
fix scrolltoposition behaviour and new alignmentPanel api
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commitdiff
2011-02-18
jprocter
fix scrolltoposition behaviour
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commitdiff
2011-02-18
jprocter
call to release any explicit event handler references
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commitdiff
2011-02-14
jprocter
JAL-769
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commitdiff
2011-02-14
jprocter
JAL-564 (annotation panel height adjustment) and alignm...
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commitdiff
2011-02-14
jprocter
JAL-621 (mouseover debugging) and JAL-564 (annotation...
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commitdiff
2011-02-14
jprocter
JAL-621 and JAL-564
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commitdiff
2011-02-14
jprocter
JAL-621 - also renamed list of javascript handlers
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commitdiff
2011-02-14
jprocter
refactored annotation panel height calculation
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commitdiff
2011-02-04
jprocter
1.2ish awt methods
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commitdiff
2011-02-04
jprocter
1.2ish awt methods and excluding unused code
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commitdiff
2011-02-04
jprocter
don't need to retrieve idwidthadjuster
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commitdiff
2011-02-04
jprocter
patch for JAL-760
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commitdiff
2011-02-04
jprocter
group associated annotation and logos JAL-516 JAL-759
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commitdiff
2011-02-04
jprocter
adjustable annotation panel height and vertical scrollb...
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commitdiff
2011-01-21
jprocter
search result highlighting and scrolling and some patch...
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commitdiff
2011-01-21
jprocter
more efficient highlighting and selection display JAL-469
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commitdiff
2011-01-21
jprocter
relaxed ID matching parameter JAL-753 and sortBy JAL-754
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commitdiff
2011-01-18
jprocter
patch for JAL-695 - need to test if this is observed...
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commitdiff
2011-01-18
jprocter
refactored VamsasListener to allow the source of the...
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commitdiff
2011-01-17
jprocter
use local reference for current target frame as set...
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commitdiff
2011-01-17
jprocter
JAL-750 and JAL-451
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commitdiff
2011-01-12
jprocter
1.1 compat
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commitdiff
2011-01-12
jprocter
javascript callback for selection, mousover, and functi...
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commitdiff
2010-12-14
jprocter
refactored and patched for JAL-721
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commitdiff
2010-12-09
jprocter
refactored and added methods for getting richer Alignme...
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commitdiff
2010-11-12
jprocter
patch for JAL-682 - copy over current display settings...
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commitdiff
2010-11-12
jprocter
patch for JAL-699 so conservation/consensus threads...
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commitdiff
2010-09-23
jprocter
revised author list
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commitdiff
2010-09-23
jprocter
apply jalview code style
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commitdiff
2010-09-23
jprocter
Jalview 2.6 source licence
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commitdiff
2010-09-22
jprocter
jmol update
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commitdiff
2010-09-14
jprocter
streamlined app and applet jmol console + event handlin...
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commitdiff
2010-09-13
jprocter
refactored to remove App reference in Applet (JAL-638)
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commitdiff
2010-09-13
jprocter
patched Jmol and code for embedding JmolAppConsole...
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commitdiff
2010-08-31
jprocter
notes re JAL-623 and JAL-583, new api methods for addin...
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commitdiff
2010-08-27
jprocter
revised sequence/structure binding so one structure...
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commitdiff
2010-08-25
jprocter
correct initing of JmolViewer to avoid security excepti...
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commitdiff
2010-08-25
jprocter
excluded methods related to broken Jmol applet binding...
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commitdiff
2010-08-20
jprocter
complete the sequence-structure mapping details. *...
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commitdiff
2010-08-20
jprocter
refactor jmol api so it doesn't clash with Swing compon...
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commitdiff
2010-08-20
jprocter
refactored external structure viewer binding API calls...
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commitdiff
2010-08-20
jprocter
improved debug output when Jmol viewer creation fails
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commitdiff
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