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Merge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' of https://source.jalview.org/git...
[jalview.git]
/
src
/
jalview
/
appletgui
/
2018-08-27
hansonr
JAL-3026 alignmentFrame.statusBar.setText -> .setStatus
tree
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commitdiff
2018-08-21
hansonr
mc_view references were MCview
tree
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commitdiff
2018-07-22
hansonr
JAL-3032 Jmol upgrade org.jmol.java.BS -> javajs.util.BS
tree
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commitdiff
2018-06-22
gmungoc
JAL-3032 avoid assignments on the same line as synchronized
tree
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commitdiff
2018-04-18
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-03-22
gmungoc
JAL-2929 unit test, tidy unused/unneeded fields/parameters
tree
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commitdiff
2018-03-16
gmungoc
Merge branch 'bug/JAL-2865removeGC' into develop
tree
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commitdiff
2018-03-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
tree
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commitdiff
2018-03-07
gmungoc
Merge branch 'bugs/JAL-2922' into releases/Release_2_10...
tree
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commitdiff
2018-03-07
gmungoc
JAL-2922 i18n and bespoke handler for Invert Selection
tree
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commitdiff
2018-03-07
gmungoc
JAL-2926 fix copy group consensus (and paste sequence...
tree
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commitdiff
2018-02-27
Jim Procter
Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104
tree
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commitdiff
2018-02-22
Jim Procter
Merge branch 'feature/JAL-984splitAdjuster' into releas...
tree
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commitdiff
2018-02-22
Jim Procter
JAL-984 ID width adjuster needs to be white !
tree
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commitdiff
2018-02-22
Jim Procter
Merge branch 'feature/JAL-984splitAdjuster' into releas...
tree
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commitdiff
2018-02-22
Jim Procter
JAL-984 remove all references to idwidth.gif and use...
tree
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commitdiff
2018-02-22
Jim Procter
Merge branch 'feature/JAL-984splitAdjuster' into releas...
tree
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commitdiff
2018-02-22
Jim Procter
JAL-294 remove unneeded paint() method
tree
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commitdiff
2018-02-22
Jim Procter
JAL-984 remove commented/unnecessary if clause
tree
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commitdiff
2018-02-21
Jim Procter
Merge branch 'bug/JAL-2778again' into releases/Release_...
tree
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commitdiff
2018-02-21
kiramt
JAL-2778 Adjust cursor changes in overview panel
tree
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commitdiff
2018-02-05
kiramt
JAL-2759 Rename getBoundedStartIterator
tree
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commitdiff
2018-02-02
gmungoc
JAL-984 merged to spikes-mungo
tree
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commitdiff
2018-02-02
gmungoc
Merge branch 'feature/JAL-984splitAdjuster' into featur...
tree
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commitdiff
2018-02-02
gmungoc
JAL-984 use cursor for drag regions to adjust annotatio...
tree
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commitdiff
2018-01-19
kiramt
JAL-2759 Changes to getVisibleSequenceStrings after...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
tree
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commitdiff
2018-01-15
kiramt
JAL-2759 Comments and renaming for has(Many)HiddenColum...
tree
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commitdiff
2018-01-10
gmungoc
JAL-2865 unhelpful System.gc() calls removed
bug/JAL-2865removeGC
tree
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commitdiff
2018-01-10
gmungoc
JAL-1793 update spike branch to latest
tree
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commitdiff
2017-12-08
gmungoc
JAL-2843 refactor / tidy for feature filter input/output
tree
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commitdiff
2017-12-05
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
tree
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commitdiff
2017-11-28
Jim Procter
Merge branch 'bug/JAL-2740' into develop
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range, Present...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 refactor conversion of table data to beans...
tree
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commitdiff
2017-11-23
gmungoc
JAL-2808 pass FeatureSettings to controller as array...
tree
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commitdiff
2017-11-22
gmungoc
JAL-2069 spike updated with latest (FeatureTypeSettings)
tree
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commitdiff
2017-11-22
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
tree
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commitdiff
2017-11-22
gmungoc
JAL-2808 JAL-2069 FeatureTypeSettings (with new Filters...
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 corrected old getVisibleBlocksIterator calls...
tree
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commitdiff
2017-11-21
kiramt
JAL-2759 Remove getVisibleBlocksIterator call
tree
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commitdiff
2017-11-21
kiramt
Merge branch 'develop' into feature/JAL-2759
tree
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commitdiff
2017-11-20
kiramt
JAL-2759 rationalise visible contigs iteration
tree
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commitdiff
2017-11-15
gmungoc
JAL-2835 spike updated with latest
tree
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commitdiff
2017-11-15
gmungoc
JAL-2069 dialog title now 'Variable colour'
tree
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commitdiff
2017-11-15
kiramt
JAL-2831 ported to applet
tree
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commitdiff
2017-11-08
kiramt
Merge branch 'develop' into feature/JAL-2759
tree
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commitdiff
2017-11-07
gmungoc
JAL-2069 update spike to latest (no value colour options)
tree
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commitdiff
2017-11-07
gmungoc
JAL-2069 choice of no / min / max colour if 'no attribu...
tree
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commitdiff
2017-11-07
gmungoc
JAL-2069 update spike branch with latest
tree
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commitdiff
2017-11-06
gmungoc
JAL-2820 include attribute value used for feature colou...
tree
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commitdiff
2017-11-02
gmungoc
JAL-2808 spike updated with latest
tree
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commitdiff
2017-10-31
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-10-27
gmungoc
JAL-2526 updated javadoc
tree
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commitdiff
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
tree
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commitdiff
2017-10-26
Jim Procter
Merge branch 'feature/JAL-2488finalize' into develop
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2727closeAllFreeMemory' into...
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
tree
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commitdiff
2017-10-24
Jim Procter
Merge branch 'features/JAL-2608closeOverview' into...
tree
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
tree
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commitdiff
2017-10-13
kiramt
JAL-2774 Created single event for update to both start...
tree
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commitdiff
2017-10-12
Jim Procter
JAL-2773 add new flag to paintAlignment(updateOverview...
features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
tree
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commitdiff
2017-10-10
Jim Procter
Merge branch 'codereviews/JAL-1990_IProgressIndicator_j...
tree
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commitdiff
2017-10-03
kiramt
JAL-2674 testing
tree
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commitdiff
2017-10-03
kiramt
JAL-2674 working refactor of drawPanel iteration
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-10-03
kiramt
JAL-2674 2nd attempt to refactor seqcanvas drawing...
tree
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commitdiff
2017-09-29
kiramt
JAL=2674 Removed getHiddenColumnsCopy
tree
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commitdiff
2017-09-29
kiramt
JAL-2674 reverted attempt at visible regions iterator
tree
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commitdiff
2017-09-28
kiramt
JAL-2647 more iterators
tree
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commitdiff
2017-09-26
kiramt
JAL-2674 Changes to pasting
tree
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commitdiff
2017-09-26
kiramt
Merge remote-tracking branch 'origin/bug/JAL-2740'...
tree
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commitdiff
2017-09-26
kiramt
JAL-2740 removed unwanted code, added unit test
tree
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commitdiff
2017-09-26
kiramt
JAL-2647 Added iterators and associated tests and bench...
tree
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commitdiff
2017-09-22
kiramt
JAL-2674 add bounds to findHiddenRegionPositions
tree
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commitdiff
2017-09-14
gmungoc
JAL-2727 null more fields in AlignmentViewport.dispose...
tree
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commitdiff
2017-09-05
Jim Procter
Merge branch 'master' into portforward/JAL-2675_2102b1t...
tree
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commitdiff
2017-09-04
kiramt
JAL-2673 turn off update to running flag from scrollUp...
bug/JAL-2673
tree
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commitdiff
2017-09-04
Jim Procter
Merge branch 'releases/Release_2_10_2b1_Branch' of...
tree
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commitdiff
2017-09-04
kiramt
JAL-2611 reinstated missed commit
tree
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commitdiff
2017-09-03
Jim Procter
Merge branch 'documentation/JAL-2675_release2102b1...
tree
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commitdiff
2017-09-01
gmungoc
JAL-2488 remove finalize methods
tree
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commitdiff
2017-08-30
kiramt
JAL-2527 Wired up cached values to overview
tree
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commitdiff
2017-08-28
gmungoc
Merge branch 'bug/JAL-2687concurrentModification' into...
tree
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commitdiff
2017-08-28
gmungoc
JAL-2608 close any Overview when alignment view is...
tree
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commitdiff
2017-08-25
gmungoc
JAL-2687 use Iterator.remove() for safe deletion while...
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
tree
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commitdiff
2017-08-18
Jim Procter
Merge branch 'feature/2588' into merge/develop_feature...
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-09
Jim Procter
Merge branch 'bug/JAL-2634' into develop
tree
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commitdiff
2017-08-03
gmungoc
JAL-2643 updated threshold on threshold value focus...
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'feature/JAL-2611' into develop
tree
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commitdiff
2017-08-01
gmungoc
Merge branch 'bug/JAL-2630gradColourUpdateOverview...
tree
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commitdiff
2017-07-31
kiramt
JAL-2634 Make overview box full height when alignment...
bug/JAL-2634
tree
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commitdiff
2017-07-31
gmungoc
JAL-2623 updated Overview/structure on input of thresho...
bug/JAL-2630gradColourUpdateOverview
tree
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commitdiff
2017-07-31
kiramt
JAL-2634 Added null test for graphics in AnnotationPane...
tree
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commitdiff
2017-07-31
gmungoc
JAL-2623 JAL-2015 set Below Threshold on FeatureColour...
tree
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commitdiff
2017-07-31
gmungoc
JAL-2630 applet update overview on release of threshold...
tree
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commitdiff
next