2005-11-29 |
amwaterhouse | Features added removed from alignment |
tree | commitdiff |
2005-11-28 |
amwaterhouse | wrapped alignment 1 larger |
tree | commitdiff |
2005-11-25 |
amwaterhouse | Dont request focus |
tree | commitdiff |
2005-11-24 |
amwaterhouse | Don't parse input id, leave it as it is |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Graphics must be set from nullFrame |
tree | commitdiff |
2005-11-17 |
amwaterhouse | Optimized Overview |
tree | commitdiff |
2005-11-16 |
amwaterhouse | Highlight from alignment |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Dont use this yet |
tree | commitdiff |
2005-11-15 |
amwaterhouse | Graphical bits moved into files to save jar size |
tree | commitdiff |
2005-11-14 |
amwaterhouse | Modifications for Applet PDB viewer |
tree | commitdiff |
2005-11-10 |
amwaterhouse | AlignSeq takes printstream as arg |
tree | commitdiff |
2005-11-04 |
amwaterhouse | Use visible id for sorting |
tree | commitdiff |
2005-11-02 |
amwaterhouse | Add jvsuffix and dbref to menu |
tree | commitdiff |
2005-11-01 |
amwaterhouse | Show JVSuffix |
tree | commitdiff |
2005-10-31 |
amwaterhouse | DBPrefix and JVSuffix added |
tree | commitdiff |
2005-10-27 |
amwaterhouse | MyGraphics added to enhance applet GUI |
tree | commitdiff |
2005-10-26 |
amwaterhouse | vamsasDemo new branch |
tree | commitdiff |
2005-09-30 |
amwaterhouse | Remove redundancy in Eclipse |
tree | commitdiff |
2005-09-28 |
amwaterhouse | Applet frame name |
tree | commitdiff |
2005-09-28 |
amwaterhouse | Put clip back in |
tree | commitdiff |
2005-09-28 |
amwaterhouse | Wrap alignment with annotations |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Dont calculate conservation for nucleotides |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Create instance of FormatAdapter |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Display nucleotides |
tree | commitdiff |
2005-09-22 |
amwaterhouse | Break if regex not found |
tree | commitdiff |
2005-09-21 |
amwaterhouse | Sequences must be aligned before PCA |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Checks end of sequence before drawing text |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Format label left align |
tree | commitdiff |
2005-09-20 |
amwaterhouse | Optimise copy image |
tree | commitdiff |
2005-09-20 |
amwaterhouse | PCAPanel checks viewport selection group |
tree | commitdiff |
2005-09-20 |
amwaterhouse | PCAPanel checks viewport selection |
tree | commitdiff |
2005-09-15 |
amwaterhouse | Applet has main method, excutable |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Remove gaps in regions, not char by char |
tree | commitdiff |
2005-09-12 |
amwaterhouse | null pointers removed |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Update overview in alignmentChanged |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Size checking in drawGraph |
tree | commitdiff |
2005-09-12 |
amwaterhouse | Overview subsamples alignment |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Only 1 NJtree |
tree | commitdiff |
2005-09-08 |
amwaterhouse | TreePanel takes viewport |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Init PCA in thread |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Optimised for wide alignments |
tree | commitdiff |
2005-09-08 |
amwaterhouse | Load in a thread |
tree | commitdiff |
2005-09-02 |
amwaterhouse | Applet search by residue index fixed |
tree | commitdiff |
2005-09-01 |
amwaterhouse | Need reference to mainApplet |
tree | commitdiff |
2005-09-01 |
amwaterhouse | Use propertyListener for alignment edits |
tree | commitdiff |
2005-09-01 |
amwaterhouse | No need to recalculate image for font change |
tree | commitdiff |
2005-08-31 |
amwaterhouse | Repaint scale panel after unselect all |
tree | commitdiff |
2005-08-31 |
amwaterhouse | Must update globalColourScheme with new consensus |
tree | commitdiff |
2005-08-30 |
amwaterhouse | UserColour gui modified |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Validate buttons and fire on mouse press, not mouse... |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Set user colours same as global |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Wrapped, getWidth > vconsensus |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Update colours after remove left, cut, paste |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Keep mouse drag to 1 block when wrapped |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Set startSeq 0 if wrap alignment |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Dont set clip if its not null |
tree | commitdiff |
2005-08-30 |
amwaterhouse | Bounds checking |
tree | commitdiff |
2005-08-30 |
amwaterhouse | If Mac, dont use fastpaint Release_2_05 |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Reset all colour schemes after gaps removed |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Keep startRes the same after removing columns |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Reset ClustalX after removing gaps |
tree | commitdiff |
2005-08-29 |
amwaterhouse | if seq<0, return |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Dont call fastPaint if Mac |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Edit and annotate wrapped alignment |
tree | commitdiff |
2005-08-29 |
amwaterhouse | Edit and annotate wrapped alignment |
tree | commitdiff |
2005-08-26 |
amwaterhouse | resizeAgain flag set if user resizes whilst image is... |
tree | commitdiff |
2005-08-24 |
amwaterhouse | Set new group width-1 |
tree | commitdiff |
2005-08-24 |
amwaterhouse | Give extra pixel for graph values Release_2_04 |
tree | commitdiff |
2005-08-24 |
amwaterhouse | Set threshold 0 if conservation |
tree | commitdiff |
2005-08-24 |
amwaterhouse | Does edit affect any groups? |
tree | commitdiff |
2005-08-23 |
amwaterhouse | End res of selection group corrected |
tree | commitdiff |
2005-08-23 |
amwaterhouse | Add windowListener in constructor |
tree | commitdiff |
2005-08-23 |
amwaterhouse | Remove ref in PaintRefresher on close, changeColour... |
tree | commitdiff |
2005-08-22 |
amwaterhouse | Check for null colour |
tree | commitdiff |
2005-08-22 |
amwaterhouse | Conservation colour scheme is no more |
tree | commitdiff |
2005-08-17 |
amwaterhouse | Read in version from build details file in applet jar |
tree | commitdiff |
2005-08-17 |
amwaterhouse | Capitalise menus |
tree | commitdiff |
2005-08-17 |
amwaterhouse | Calculation - consensus |
tree | commitdiff |
2005-08-15 |
amwaterhouse | IgnoreGapsConsensus |
tree | commitdiff |
2005-08-09 |
amwaterhouse | Applet handles multiple sequence links |
tree | commitdiff |
2005-08-03 |
amwaterhouse | Version 2.02 |
tree | commitdiff |
2005-07-29 |
amwaterhouse | Remove ref to ServletGUI |
tree | commitdiff |
2005-07-29 |
amwaterhouse | Correct label for end res in copy |
tree | commitdiff |
2005-07-18 |
amwaterhouse | Copy seq ordering bug fixed |
tree | commitdiff |
2005-07-11 |
amwaterhouse | Must check if group.sequences are null in remove gaps |
tree | commitdiff |
2005-07-11 |
amwaterhouse | check groupsize is non zero |
tree | commitdiff |
2005-07-11 |
amwaterhouse | Release and build date methods changed |
tree | commitdiff |
2005-07-07 |
amwaterhouse | press del to cut |
tree | commitdiff |
2005-07-07 |
amwaterhouse | delete markers from start to end |
tree | commitdiff |
2005-07-07 |
amwaterhouse | Remove all gaps must check jSize |
tree | commitdiff |
2005-07-06 |
amwaterhouse | Help file url changed |
tree | commitdiff |
2005-07-06 |
amwaterhouse | dont add null group |
tree | commitdiff |
2005-06-30 |
amwaterhouse | Formatting changes |
tree | commitdiff |
2005-06-16 |
amwaterhouse | dont add sequence twice to new group |
tree | commitdiff |
2005-06-16 |
amwaterhouse | Sort Groups modified |
tree | commitdiff |
2005-06-16 |
amwaterhouse | remove gaps applies to selected area |
tree | commitdiff |
2005-06-15 |
amwaterhouse | add/remove updated |
tree | commitdiff |
2005-06-14 |
amwaterhouse | Dont delete nextSeq |
tree | commitdiff |
2005-06-13 |
amwaterhouse | clustal probs |
tree | commitdiff |
2005-06-13 |
amwaterhouse | PaintRefresh changed |
tree | commitdiff |
next |