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Merge branch 'develop' into releases/Release_2_11_Branch
[jalview.git] / src / jalview / appletgui /
2019-03-21 Ben SoaresJAL-3130 Replaced deprecated Class.newInstance() with... tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-11 gmungocMerge branch 'feature/JAL-3127_seqidChainshading' into... tree | commitdiff
2019-03-05 gmungocMerge branch 'bug/JAL-2621' into develop tree | commitdiff
2019-03-05 gmungocMerge remote-tracking branch 'origin/bug/JAL-2839findWi... tree | commitdiff
2019-03-04 gmungocMerge branch 'bug/JAL-3099alignmentVisibleWidth' into... tree | commitdiff
2019-03-04 gmungocMerge branch 'bug/JAL-3120restoreFeatureColour' into... tree | commitdiff
2019-03-01 gmungocMerge branch 'bug/JAL-2791exportFilteredFeature' into... tree | commitdiff
2019-01-16 Jim ProcterMerge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA... tree | commitdiff
2018-12-19 gmungocJAL-2621 Overview uses hand cursor in drag box, crossha... bug/JAL-2621 tree | commitdiff
2018-12-17 Jim ProcterMerge branch 'bug/JAL-2864nullOverviewCanvas' into... tree | commitdiff
2018-12-06 gmungocJAL-1854 fix Checkstyle import violations tree | commitdiff
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating... tree | commitdiff
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi... tree | commitdiff
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour tree | commitdiff
2018-09-10 gmungocJAL-3099 use Alignment.getVisibleWidth() where wanted bug/JAL-3099alignmentVisibleWidth tree | commitdiff
2018-05-07 gmungocJAL-1767 JAL-2647 hide 'Input Data..' for PCA loaded... tree | commitdiff
2018-05-04 gmungocJAL-2975 Shift-arrow keys to rotate PCA incrementally tree | commitdiff
2018-05-04 gmungocJAL-1767 refactorings to enable faithful restore of... tree | commitdiff
2018-04-27 gmungocJAL-2963 correctly dim PCA points with negative z-coord... tree | commitdiff
2018-04-27 gmungocJAL-1767 refactoring and tidying of RotatableCanvas... tree | commitdiff
2018-04-26 gmungocJAL-2962 rename run method (as not a Runnable) tree | commitdiff
2018-04-26 gmungocJAL-2962 code tidying/documentation (non-functional... tree | commitdiff
2018-04-18 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-03-22 gmungocJAL-2929 unit test, tidy unused/unneeded fields/parameters tree | commitdiff
2018-03-16 gmungocMerge branch 'bug/JAL-2865removeGC' into develop tree | commitdiff
2018-03-14 gmungocJAL-2933 pass viewport in Finder constructor, find... bug/JAL-2839findWithHidden tree | commitdiff
2018-03-14 gmungocJAL-2933 gui and applet Finder hold a FinderI per viewport tree | commitdiff
2018-03-13 gmungocJAL-2839 refactored analysis.Finder and tests tree | commitdiff
2018-03-12 gmungocJAL-2933 remember Find position per viewport tree | commitdiff
2018-03-09 gmungocJAL-2839 Finder refactoring prior to fixing the defect tree | commitdiff
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-03-07 gmungocMerge branch 'bugs/JAL-2922' into releases/Release_2_10... tree | commitdiff
2018-03-07 gmungocJAL-2922 i18n and bespoke handler for Invert Selection tree | commitdiff
2018-03-07 gmungocJAL-2926 fix copy group consensus (and paste sequence... tree | commitdiff
2018-02-27 Jim ProcterMerge branch 'feature/JAL-2759' into merge/JAL-2759_2104 tree | commitdiff
2018-02-22 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas... tree | commitdiff
2018-02-22 Jim ProcterJAL-984 ID width adjuster needs to be white ! tree | commitdiff
2018-02-22 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas... tree | commitdiff
2018-02-22 Jim ProcterJAL-984 remove all references to idwidth.gif and use... tree | commitdiff
2018-02-22 Jim ProcterMerge branch 'feature/JAL-984splitAdjuster' into releas... tree | commitdiff
2018-02-22 Jim ProcterJAL-294 remove unneeded paint() method tree | commitdiff
2018-02-22 Jim ProcterJAL-984 remove commented/unnecessary if clause tree | commitdiff
2018-02-21 Jim ProcterMerge branch 'bug/JAL-2778again' into releases/Release_... tree | commitdiff
2018-02-21 kiramtJAL-2778 Adjust cursor changes in overview panel tree | commitdiff
2018-02-05 kiramtJAL-2759 Rename getBoundedStartIterator tree | commitdiff
2018-02-02 gmungocJAL-984 merged to spikes-mungo tree | commitdiff
2018-02-02 gmungocMerge branch 'feature/JAL-984splitAdjuster' into featur... tree | commitdiff
2018-02-02 gmungocJAL-984 use cursor for drag regions to adjust annotatio... tree | commitdiff
2018-01-19 kiramtJAL-2759 Changes to getVisibleSequenceStrings after... tree | commitdiff
2018-01-15 kiramtJAL-2759 Rename findColumnPosition and adjustForHiddenC... tree | commitdiff
2018-01-15 kiramtJAL-2759 Comments and renaming for has(Many)HiddenColum... tree | commitdiff
2018-01-11 kiramtJAL-2621 Updated applet code to use purely awt cursor... tree | commitdiff
2018-01-10 kiramtJAL-2621 Added custom drag cursor to overview panel tree | commitdiff
2018-01-10 gmungocJAL-2865 unhelpful System.gc() calls removed bug/JAL-2865removeGC tree | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest tree | commitdiff
2018-01-08 gmungocJAL-2864 OverviewCanvas.dispose() for applet tree | commitdiff
2017-12-08 gmungocJAL-2843 refactor / tidy for feature filter input/output tree | commitdiff
2017-12-05 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present... tree | commitdiff
2017-11-23 gmungocJAL-2808 refactor conversion of table data to beans... tree | commitdiff
2017-11-23 gmungocJAL-2808 pass FeatureSettings to controller as array... tree | commitdiff
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings) tree | commitdiff
2017-11-22 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-22 gmungocJAL-2808 JAL-2069 FeatureTypeSettings (with new Filters... tree | commitdiff
2017-11-21 kiramtJAL-2759 corrected old getVisibleBlocksIterator calls... tree | commitdiff
2017-11-21 kiramtJAL-2759 Remove getVisibleBlocksIterator call tree | commitdiff
2017-11-21 kiramtMerge branch 'develop' into feature/JAL-2759 tree | commitdiff
2017-11-20 kiramtJAL-2759 rationalise visible contigs iteration tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL-2069 dialog title now 'Variable colour' tree | commitdiff
2017-11-15 kiramtJAL-2831 ported to applet tree | commitdiff
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759 tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike to latest (no value colour options) tree | commitdiff
2017-11-07 gmungocJAL-2069 choice of no / min / max colour if 'no attribu... tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest tree | commitdiff
2017-11-06 gmungocJAL-2820 include attribute value used for feature colou... tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-10-31 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-10-27 gmungocJAL-2526 updated javadoc tree | commitdiff
2017-10-27 gmungocJAL-1793 spike branch updated to latest tree | commitdiff
2017-10-26 Jim ProcterMerge branch 'feature/JAL-2488finalize' into develop tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2727closeAllFreeMemory' into... tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2392_deadlockonpdbdisplay' into... tree | commitdiff
2017-10-24 Jim ProcterMerge branch 'features/JAL-2608closeOverview' into... tree | commitdiff
2017-10-24 gmungocJAL-2738 update spike branch with latest tree | commitdiff
2017-10-13 kiramtJAL-2774 Created single event for update to both start... tree | commitdiff
2017-10-12 Jim ProcterJAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview tree | commitdiff
2017-10-10 Jim ProcterMerge branch 'codereviews/JAL-1990_IProgressIndicator_j... tree | commitdiff
2017-10-03 kiramtJAL-2674 testing tree | commitdiff
2017-10-03 kiramtJAL-2674 working refactor of drawPanel iteration tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-10-03 kiramtJAL-2674 2nd attempt to refactor seqcanvas drawing... tree | commitdiff
2017-09-29 kiramtJAL=2674 Removed getHiddenColumnsCopy tree | commitdiff
2017-09-29 kiramtJAL-2674 reverted attempt at visible regions iterator tree | commitdiff
2017-09-28 kiramtJAL-2647 more iterators tree | commitdiff
2017-09-26 kiramtJAL-2674 Changes to pasting tree | commitdiff
2017-09-26 kiramtMerge remote-tracking branch 'origin/bug/JAL-2740'... tree | commitdiff
2017-09-26 kiramtJAL-2740 removed unwanted code, added unit test tree | commitdiff
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