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[jalview.git] / src / jalview / controller / AlignViewController.java

2017-11-02	gmungoc	JAL-2808 refactored getColor() checks feature visibility	blob \| commitdiff
2017-10-31	gmungoc	Merge branch 'bug/JAL-2791selectVisibleFeatures' into	blob \| commitdiff \| diff to current
2017-10-31	gmungoc	JAL-2791 select columns by _visible_ features	blob \| commitdiff \| diff to current
2017-10-30	gmungoc	JAL-2791 check feature visibility when selecting columns	blob \| commitdiff \| diff to current
2017-10-26	Jim Procter	Merge branch 'feature/JAL-2488finalize' into develop	blob \| commitdiff \| diff to current
2017-10-12	Jim Procter	JAL-2773 add new flag to paintAlignment(updateOverview... features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview	blob \| commitdiff \| diff to current
2017-09-01	gmungoc	JAL-2488 remove finalize methods	blob \| commitdiff \| diff to current
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-06-01	gmungoc	JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn	blob \| commitdiff \| diff to current
2017-05-31	gmungoc	JAL-2574 preparation for Sequence.findFeatures(col1...	blob \| commitdiff \| diff to current
2017-05-19	gmungoc	JAL-2490 only count sequences where feature overlap...	blob \| commitdiff \| diff to current
2017-05-15	gmungoc	JAL-2490 use findFeatures() for efficient feature overl...	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-23	Jim Procter	Merge branch 'bug/JAL-2323disulfideOverview' into develop	blob \| commitdiff \| diff to current
2016-11-21	gmungoc	JAL-2333 corrected select columns with 'contact' feature	blob \| commitdiff \| diff to current
2016-10-30	Jim Procter	JAL-1738 JAL-345 new controller method based on mark...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-08-30	gmungoc	Merge branch 'develop' into features/filetypeEnum	blob \| commitdiff \| diff to current
2016-08-24	gmungoc	JAL-1424 recode calls to MessageManager to allow code...	blob \| commitdiff \| diff to current
2016-08-23	gmungoc	JAL-2174 markColumns() refactored inside ColumnSelection	blob \| commitdiff \| diff to current
2016-08-19	gmungoc	JAL-2174 bug fixes + refactoring to allow + unit tests	blob \| commitdiff \| diff to current
2016-08-18	gmungoc	JAL-1445 status message '...not containing...' for...	blob \| commitdiff \| diff to current
2016-07-12	gmungoc	FileFormat enum wip changes	blob \| commitdiff \| diff to current
2016-05-03	gmungoc	JAL-2050 hide introns also when fetching Ensembl xrefs...	blob \| commitdiff \| diff to current
2016-02-12	gmungoc	JAL-2008 avoid unnecessary repaints; signatures changed...	blob \| commitdiff \| diff to current
2016-02-04	gmungoc	Merge branch 'develop' into features/JAL-653_JAL-1766_h...	blob \| commitdiff \| diff to current
2016-02-04	gmungoc	JAL-599 bug fixed so array of visible types is populated	blob \| commitdiff \| diff to current
2016-01-28	gmungoc	Merge branch 'develop' into JAL-1705_trialMerge	blob \| commitdiff \| diff to current
2016-01-11	gmungoc	JAL-1989 more unit tests and encapsulation for ColumnSe...	blob \| commitdiff \| diff to current
2015-11-21	gmungoc	JAL-653 JAL-1968 FeaturesFile now handles Jalview or...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-06-05	Jim Procter	JAL-1482 JAL-653 refactor feature file import code...	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	JAL-1683 replace year/version strings with tokens in...	blob \| commitdiff \| diff to current
2015-03-06	Jim Procter	Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...	blob \| commitdiff \| diff to current
2015-02-19	gmungoc	JAL-1665 refactored Sequence.getSequenceFeatures features/sequenceFeatureRefactor	blob \| commitdiff \| diff to current
2015-02-12	Jim Procter	JAL-1350 pass the columnselection rather then selected...	blob \| commitdiff \| diff to current
2015-01-22	Charles Ofoegbu	JAL-1553 added applet support for the select-column...	blob \| commitdiff \| diff to current
2015-01-20	Charles Ofoegbu	Further abstractions and clean up	blob \| commitdiff \| diff to current
2014-12-15	Jim Procter	JAL-1620 version bump and release notes	blob \| commitdiff \| diff to current
2014-11-14	Jim Procter	Merge branch 'develop' into JAL-1483_featureBasedTreeCalc	blob \| commitdiff \| diff to current
2014-09-23	darolmar	JAL-1355	blob \| commitdiff \| diff to current
2014-08-08	j.procter@dundee...	tidy imports	blob \| commitdiff \| diff to current
2014-08-08	j.procter@dundee...	JAL-1483 sort by feature score/density made first class...	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 source formatting	blob \| commitdiff \| diff to current
2014-06-06	Jim Procter	JAL-1517 fix copyright for 2.8.2	blob \| commitdiff \| diff to current
2014-05-23	Jim Procter	JAL-1445 extend functionality to select or toggle selec...	blob \| commitdiff \| diff to current
2014-02-17	Jim Procter	JAL-1445 ported routine for selecting containing/non...	blob \| commitdiff \| diff to current
2014-02-17	Jim Procter	JAL-535 interface for GUI state update methods that...	blob \| commitdiff \| diff to current
2013-10-07	Jim Procter	JAL-1385 Alignment view controller logic implementation...	blob \| commitdiff \| diff to current

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