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[jalview.git] / src / jalview / datamodel / Sequence.java

2006-10-26	amwaterhouse	No need to reduce length if inserting more gaps at...	blob \| commitdiff
2006-10-24	amwaterhouse	changeCase, removeGaps moved to commands package	blob \| commitdiff \| diff to current
2006-10-06	jprocter	javadoc	blob \| commitdiff \| diff to current
2006-08-21	amwaterhouse	header updated	blob \| commitdiff \| diff to current
2006-08-21	jprocter	remove gaps method from AlignFrame.remove_gaps_actionPe...	blob \| commitdiff \| diff to current
2006-08-14	jprocter	fixed off by one bug in end sequence from getSubSequenc...	blob \| commitdiff \| diff to current
2006-08-13	jprocter	fixed end-residue bug and subjob panel names bug	blob \| commitdiff \| diff to current
2006-08-09	jprocter	new SequenceI method for making a sub sequence from...	blob \| commitdiff \| diff to current
2006-07-21	amwaterhouse	DBRef is an array, not vector	blob \| commitdiff \| diff to current
2006-07-18	jprocter	use of GapChars	blob \| commitdiff \| diff to current
2006-07-13	amwaterhouse	Sequence is private	blob \| commitdiff \| diff to current
2006-07-12	amwaterhouse	sequences are private in SequenceGroup	blob \| commitdiff \| diff to current
2006-06-15	amwaterhouse	Maintain status and position only for uniprot parsing	blob \| commitdiff \| diff to current
2006-06-09	amwaterhouse	Remove getsfarray	blob \| commitdiff \| diff to current
2006-05-10	amwaterhouse	Changes case to end of alignment	blob \| commitdiff \| diff to current
2006-05-02	amwaterhouse	Toggle case added to popup menu	blob \| commitdiff \| diff to current
2006-04-28	amwaterhouse	Make sure end is less than sequence width	blob \| commitdiff \| diff to current
2006-04-28	amwaterhouse	changeCase	blob \| commitdiff \| diff to current
2006-03-24	amwaterhouse	Add check if sequence already exists	blob \| commitdiff \| diff to current
2006-03-16	amwaterhouse	HiddenSequence methods	blob \| commitdiff \| diff to current
2006-02-24	amwaterhouse	Features are now an array, not vector	blob \| commitdiff \| diff to current
2006-02-03	amwaterhouse	has ref to annotation	blob \| commitdiff \| diff to current
2005-12-22	amwaterhouse	REGEX CANNOT BE STATIC	blob \| commitdiff \| diff to current
2005-12-06	amwaterhouse	after merge	blob \| commitdiff \| diff to current
2005-09-30	amwaterhouse	Remove redundancy in Eclipse	blob \| commitdiff \| diff to current
2005-07-29	amwaterhouse	if endRes <1, calc the endRes	blob \| commitdiff \| diff to current
2005-06-30	amwaterhouse	Formatting changes	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	Formatted source	blob \| commitdiff \| diff to current
2005-06-08	amwaterhouse	GPL license added	blob \| commitdiff \| diff to current
2005-05-23	jprocter	added some assertions and rangechecks for insert/delete...	blob \| commitdiff \| diff to current
2005-05-05	amwaterhouse	pdbfile details not essential to sequence	blob \| commitdiff \| diff to current
2005-05-03	amwaterhouse	1.1 compatible	blob \| commitdiff \| diff to current
2005-04-06	jprocter	New method for helping to quickly map different aligned...	blob \| commitdiff \| diff to current
2005-03-09	amwaterhouse	allows deletion of chars	blob \| commitdiff \| diff to current
2005-02-11	amwaterhouse	end of seq adjustments	blob \| commitdiff \| diff to current
2005-02-11	amwaterhouse	watch out for end of seq in findposition	blob \| commitdiff \| diff to current
2005-02-10	amwaterhouse	watch end of sequence when asking for (start, end)	blob \| commitdiff \| diff to current
2005-02-04	amwaterhouse	SequenceFeature display added	blob \| commitdiff \| diff to current
2004-12-15	amwaterhouse	isGap method added to utils	blob \| commitdiff \| diff to current
2004-11-18	amwaterhouse	updates	blob \| commitdiff \| diff to current
2004-11-16	amwaterhouse	initial colour of sequence is black	blob \| commitdiff \| diff to current
2004-11-02	amwaterhouse	Jalview Imported Sources start	blob \| commitdiff \| diff to current

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