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[jalview.git] / src / jalview / ext / ensembl / EnsemblLookup.java

2023-08-10	Ben Soares	JAL-629 Change all stdout and stderr output to use...	blob \| commitdiff
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2022-02-11	Jim Procter	JAL-3949 - refactor logging from jalview.bin.Cache...	blob \| commitdiff \| diff to current
2022-02-11	Ben Soares	JAL-3949 Complete new abstracted logging framework...	blob \| commitdiff \| diff to current
2019-07-16	gmungoc	JAL-3210 Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2019-06-07	gmungoc	JAL-2738 use GeneLocus extends DBRefEntry to hold chrom...	blob \| commitdiff \| diff to current
2019-01-25	hansonr	JSON refactoring	blob \| commitdiff \| diff to current
2018-09-03	gmungoc	JAL-3076 fetch Ensembl sequence as JSON instead of...	blob \| commitdiff \| diff to current
2018-08-10	gmungoc	JAL-3076 fetch Ensembl sequence as JSON instead of...	blob \| commitdiff \| diff to current
2018-06-07	gmungoc	JAL-2755 correct Javadoc and error handling	blob \| commitdiff \| diff to current
2018-03-16	gmungoc	JAL-2679 getGeneId() now uses the same pattern as getGe...	blob \| commitdiff \| diff to current
2018-03-16	gmungoc	Merge remote-tracking branch 'origin/releases/Release_2...	blob \| commitdiff \| diff to current
2018-03-14	gmungoc	JAL-2679 reinstating changes lost in VCF merge	blob \| commitdiff \| diff to current
2018-03-14	gmungoc	JAL-2679 reinstating changes lost in VCF merge	blob \| commitdiff \| diff to current
2018-03-07	Jim Procter	Merge branch 'releases/Release_2_10_4_Branch' into...	blob \| commitdiff \| diff to current
2018-02-23	Jim Procter	Merge branch 'features/JAL-2885UniprotHttps' into relea...	blob \| commitdiff \| diff to current
2018-01-30	gmungoc	JAL-1793 update spike build to latest incl stop and...	blob \| commitdiff \| diff to current
2018-01-29	gmungoc	JAL-2743 recoded EnsemblLookup without lambda expressio...	blob \| commitdiff \| diff to current
2018-01-26	gmungoc	Merge branch 'develop' into features/JAL-1793VCF	blob \| commitdiff \| diff to current
2018-01-16	gmungoc	JAL-2679 use object_type=Transcript for lookup of Paren...	blob \| commitdiff \| diff to current
2018-01-16	gmungoc	JAL-2885 uniprot now https, uniprot/ensembl/pfam/xfam...	blob \| commitdiff \| diff to current
2017-10-27	gmungoc	JAL-1793 spike branch updated to latest	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2743 look up species and gene loci for Ensembl...	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-1739 Javadoc updated for Lambda expression parser...	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	JAL-2738 update spike branch with latest	blob \| commitdiff \| diff to current
2017-10-24	gmungoc	Merge branch 'develop' into features/JAL-1793VCF; lambd...	blob \| commitdiff \| diff to current
2017-10-20	gmungoc	Push 1793 latest to spike branch	blob \| commitdiff \| diff to current
2017-10-20	gmungoc	JAL-2253 pull up constant, additional unit test bug/JAL-2253	blob \| commitdiff \| diff to current
2017-10-19	gmungoc	JAL-2755 add species lookup	blob \| commitdiff \| diff to current
2017-10-09	gmungoc	JAL-2523 basic sleep and retry (3 times) on 429 respons... features/JAL-2523httpRetries	blob \| commitdiff \| diff to current
2017-08-31	gmungoc	JAL-2253 safer simpler resolution of identifiers using...	blob \| commitdiff \| diff to current
2016-10-05	Jim Procter	JAL-2189 apply license	blob \| commitdiff \| diff to current
2016-10-05	Jim Procter	JAL-2189 source formatting	blob \| commitdiff \| diff to current
2016-03-03	gmungoc	JAL-1705 include stop codons in derived CDS; support...	blob \| commitdiff \| diff to current
2016-02-19	gmungoc	JAL-1705 return Ensembl genes for model species for...	blob \| commitdiff \| diff to current

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