JAL-1177 patches to loader to cope with dataset only jalview xml documents
[jalview.git] / src / jalview / gui / AlignFrame.java
2014-04-21 Jim ProcterJAL-1383 scrubbed envision GUI and documentation
2014-04-21 Jim ProcterJAL-1485 JAL-1473 use compound i18n messages to constru...
2014-04-21 Jim ProcterJAL-1466 flag and jalview_properties setting to control...
2014-04-21 Jim ProcterJAL-1466 new calculation menu option to recover the...
2014-04-21 Jim Proctertidy imports
2014-04-21 Jim ProcterJAL-1473 tree calcs performed with ScoreModelI instances
2014-04-21 Jim ProcterJAL-1473 menu entries for different score models availa...
2014-02-21 Jim ProcterJAL-1354 use real var-args method signature to avoid...
2014-02-17 Jim ProcterJAL-535 interface for GUI state update methods that...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-12-25 darolmarJAL-1355 (basic i18n support)
2013-10-17 Jim ProcterJAL-1397 make sure ColourschemeI instances are up to...
2013-10-08 Jim ProcterMerge branch 'Release_2_8_1_Branch' into Release_2_8_1_...
2013-10-08 Jim ProcterJAL-1384 group/ungroup sequences with command/ctrl...
2013-10-07 Jim ProcterJAL-1385 refactor logic to AlignmentViewController
2013-10-05 Jim ProcterJAL-1379 graceful degradation to legacy service when...
2013-09-18 Jim ProcterJAL-1355 - fix compilation errors: typos and missing...
2013-08-29 darolmari18n
2013-08-14 Jim ProcterJAL-1354 replacement of bare strings in GUI dialogs...
2013-06-17 Jim ProcterJAL-1312 more helpful error message when translation...
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-25 jprocterJAL-1031 JAL-1032 if selection is non-null but empty...
2012-09-25 jprocterJAL-1173 try to catch OOMs when loading annotation...
2012-09-24 jprocterJAL-958 enable logo display when normalise option selected
2012-08-29 jprocterJAL-48 patch NPE when encountering an alignment window...
2012-08-28 jprocterJAL-1145 patch: sequence associated annotation with...
2012-08-24 jprocterJAL-1143 - ensure we revalidate annotation panel height...
2012-08-07 jprocterJAL-975 JAL-1137 debug messages for web service client...
2012-08-01 jprocterJAL-976 ensure protein disorder services appears in...
2012-06-15 jprocterJAL-535 refactoring todo
2012-06-15 jprocterExtended IProgressIndicator with method to check if...
2012-06-13 jprocterjavatidy
2012-06-12 jprocterJAL-1115 refactor reordering code operating directly...
2012-06-12 jprocterJAL-1115 refactor base collection for Alignment from...
2012-05-30 jprocterJAL-969 - refactor colourscheme machinery from GUI...
2012-05-30 jprocterJAL-1114 - refactor methods handling Vectors and Hashta...
2012-05-24 jprocterTODO: JAL-1108
2012-05-24 jprocterJAL-1078 - removed 'Load Score File' menu item and...
2012-05-24 jproctertodo: JAL-1108
2012-05-23 jprocterJAL-1067 report any warning messages to user
2012-05-23 jprocterJAL-1067, JAL-1105 - refactor parser to fit Jalview...
2012-05-22 jprocterMerge remote-tracking branch 'origin/Tcoffee_JAL-1065...
2012-04-24 jprocterJAL-1075, JAL-1061, JAL-1064 - introduced second tier...
2012-04-20 jprocterJAL-1064 - hack to create menu item label for each...
2012-03-27 jprocterformatting
2012-03-27 jprocterJAL-976 - tweak web services gui so empty menus don...
2011-11-03 jprocter(JAL-978) discover JABA1 and JABA2 services and generat...
2011-10-28 jprocter(JAL-963) refactor RNA helix helper class to schemes
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to...
2011-10-21 jprocterRefactored alignment viewport to use common base, exten...
2011-10-11 jprocternormalised logo rendering (JAL-958)
2011-10-10 jprocterupdate author list in license for (JAL-826)
2011-10-07 jproctermerge Jan and Lauren's RNA GUI changes into develop...
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_...
2011-09-27 jprocterapply version 2.7 copyright
2011-09-16 jprocterJAL-574 added option to enable/disable 'follow selectio...
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc...
2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort...
2011-09-15 jprocterJAL-854 tweaked menu layout so services appear before...
2011-08-17 jprocterJAL-853 use service action attribute to index services...
2011-07-29 janengelhardtJAL-885; Implementation of StructureFrequency.java...
2011-07-25 janengelhardtJAL-842; toy example to insert nucleotides in sequences...
2011-07-25 janengelhardtJAL-841; Structure trigger token in jalview.io.Alignmen...
2011-07-25 janengelhardtStart merging of Laurens Code
2011-07-21 jprocterretrieve all sequences matching a particular name ...
2011-07-09 jprocterrefactored from PopupMenu (for JAL-860)
2011-02-18 jprocterJAL-779 and some redraw refinements
2011-01-21 jprocterrelaxed ID matching parameter JAL-753 and sortBy JAL-754
2011-01-12 jprocterselection should be sent after refresh happens
2011-01-07 jprocterbulk associate pdb files dropped on to alignment :...
2010-12-17 jprocterfirst publicly accessible test of JAL-724
2010-12-14 jprocterrefactored and patched for JAL-721
2010-09-23 jprocterapply jalview code style
2010-09-23 jprocterJalview 2.6 source licence
2010-09-19 jproctername change for jaba
2010-09-19 jprocterthread off sequence fetcher initialisation to make...
2010-09-10 jprocterthreaded off ws menu building to avoid initial pause...
2010-08-18 jprocterJAL-612 - catch hidden OOM related to filling in cut...
2010-08-18 jprocter1.5 annotation fix and thread safe menu update
2010-06-21 jprocterensure service menu is rebuilt after update listeners...
2010-06-19 jprocterrejigged change support to make it (more) reliable
2010-06-11 jprocterpatched for JAL-531 - only display full symbol distribu...
2010-06-08 jproctertrim hidden regions outside selection when copying...
2010-06-06 jprocterpatch for JAL-542
2010-05-21 jproctermore robust discovery and preset support
2010-05-17 jproctermore robust jws2 service discovery
2010-05-14 jprocterFirst patch for * JAL-493
2010-04-30 jprocterjalview 2.5 release banner
2010-04-29 jprocterisAligned assertion (bug 0008144)
2010-04-29 jprocterhide/show selected region menu entries and key bindings
2010-04-22 jprocterfeature settings is updated if new features are added...
2010-04-14 jprocterprofile visualizations are now logos
2010-04-01 jprocterrefactored copy of groupURL mechanism into new Envision...
2010-03-30 jproctergroup autoannotation and consensus display settings
2010-03-26 jprocterenable feature display when feature settings is opened.
2010-02-10 jprocterprogress bar hashtable entry was not being removed...
2010-02-09 jproctertodo
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