JAL-2668 fix broken factory method for colour scheme
[jalview.git] / src / jalview / gui /
2018-02-27 gmungocJAL-2717 JAL-2668 fixes to HMMER colour scheme display...
2018-02-22 gmungocJAL-2629 tidy unit tests, constants etc
2018-02-21 gmungocJAL-2629 simplifying method signatures in Hmmer command...
2018-02-20 gmungocMerge branch 'develop' into features/mchmmer
2018-02-19 gmungocJAL-2629 refactoring of Hmmer preferences
2018-02-19 gmungocJAL-2629 partial refactoring of Hmmer command classes
2018-02-07 gmungocJAL-2808 ensure pattern field re-enabled when needed...
2018-02-02 gmungocJAL-984 merged to spikes-mungo
2018-02-02 gmungocMerge branch 'feature/JAL-984splitAdjuster' into featur...
2018-02-02 gmungocJAL-984 use cursor for drag regions to adjust annotatio...
2018-02-02 gmungocJAL-984 better behaved panel height adjuster
2018-01-31 gmungocJAL-2792 added tooltip to menu items in case of truncation
2018-01-30 gmungocJAL-1793 update spike build to latest incl stop and...
2018-01-30 gmungocJAL-2897 generate peptide variants for synonymous codon...
2018-01-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
2018-01-18 gmungocJAL-2810 JAL-2886 i18n
2018-01-10 gmungocJAL-1793 update spike branch to latest
2018-01-09 gmungocJAL-2843 unit tests for Save/Load colours and filters...
2018-01-08 gmungocJAL-2069 fix setting initial value of slider from threshold
2017-12-14 gmungocJAL-2843 save/restore colour feature by attribute,...
2017-12-14 gmungocJAL-2879 save/restore feature sub-attributes in Jalview...
2017-12-14 gmungocJAL-2843 schema and code changes to save colour by...
2017-12-08 gmungocJAL-2843 refactor / tidy for feature filter input/output
2017-12-08 gmungocJAL-2843 methods relocated
2017-12-08 gmungocJAL-2843 FeatureRenderer.getFeatureFilters returns...
2017-12-05 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-12-04 gmungocJAL-2850 JAL-1766 option to load contig sequence refere...
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term...
2017-11-30 Jim ProcterJAL-2849 JAL-2863 file format preferences TODO

2017-11-28 Jim ProcterMerge branch 'bug/JAL-2859_uniprottowrongpdbid' into...
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2842' into develop
2017-11-28 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-27 Jim ProcterJAL-2859 disambiguate with PDB ID if no file path bug/JAL-2859_uniprottowrongpdbid
2017-11-24 gmungocJAL-2808 update spike to latest
2017-11-24 gmungocJAL-2808 refactoring to better handler filter by Score...
2017-11-24 gmungocJAL-2808 relocate constants for compiler, add COLUMN_CO...
2017-11-23 gmungocJAL-2808 update spike to latest (filter range tooltip...
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with...
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present...
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options
2017-11-23 kiramtMerge branch 'develop' into bug/JAL-2851 bug/JAL-2851
2017-11-23 kiramtJAL-2851 Fix merge error breaking vertical scrolling
2017-11-23 gmungocJAL-2808 pass FeatureSettings to controller as array...
2017-11-22 gmungocJAL-2808 update conditions list on change of attribute...
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings)
2017-11-22 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-22 gmungocJAL-2808 JAL-2069 FeatureTypeSettings (with new Filters...
2017-11-22 gmungocJAL-2069 renamed helper method better
2017-11-22 gmungocJAL-2808 defer dispose to allow screen location to...
2017-11-17 Jim ProcterJAL-2698 Cached PDB Entries -> Cached Structures in...
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2784' into develop
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2821' into develop
2017-11-17 kiramtMerge branch 'develop' into bug/JAL-2837 bug/JAL-2837
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop
2017-11-17 gmungocJAL-2808 set (read-only) condition text field as disabled
2017-11-16 gmungocJAL-2069 fix minor bugs in variable setting
2017-11-16 kiramtJAL-2831 Removed unwanted hidden sequences checks bug/JAL-2831
2017-11-16 kiramtJAL-2842 remove infinite loop in cursor move bug/JAL-2842
2017-11-15 kiramtJAL-2831 Don't show cursor if position in hidden region
2017-11-15 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-15 kiramtJAL-2811 Updated following review bug/JAL-2811
2017-11-15 kiramtJAL-2840 fix wrapped scrolling when using cursor at...
2017-11-15 kiramtJAL-2834 JAL-2836 temporarily disabled wrapped mode...
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-15 gmungocJAL-2835 support filter/colour by nested attribute...
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-14 kiramtJAL-2811 Changed to overlay on via graphics context...
2017-11-14 kiramtJAL-2811 Missed commit
2017-11-14 kiramtJAL-2811 Made it work for hidden columns/seqs too
2017-11-14 kiramtMerge branch 'bug/JAL-2811' into bug/JAL-2831
2017-11-14 kiramtJAL-2831 Added move viewport event and set up cursor...
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831
2017-11-13 kiramtJAL-2811 Tidy
2017-11-13 kiramtJAl-2811 Working for wrapped panels too
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-13 kiramtJAL-2811 Add layer for cursor in SeqCanvas
2017-11-13 Jim ProcterMerge branch 'imp/JAL-2810_ftsIDtab' into develop
2017-11-13 kiramtJAL-2784 new checks for gg==null bug/JAL-2784
2017-11-10 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-08 gmungocJAL-2808 i18n, widget state settings
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains
2017-11-08 gmungocJAL-2069 updated spike to latest
2017-11-08 gmungocJAL-2069 ensure threshline instantiated to avoid NPE
2017-11-08 gmungocJAL-2069 (helper method for) italic titled borders
2017-11-07 Jim ProcterMerge branch 'imp/JAL-2775' into develop
2017-11-07 Jim ProcterJAL-2810 ‘Close’ is now ‘Cancel’ in SequenceFetcher...
2017-11-07 Jim ProcterJAL-2810 working back button shown for bulk ID retrieva...
2017-11-07 kiramtJAL-2774 Fix fastpaint of wrapped alignment
2017-11-07 kiramtJAL-2821 refactored drawPartialGroupOutline bug/JAL-2821
2017-11-07 gmungocJAL-2069 update spike to latest (no value colour options)
2017-11-07 gmungocJAL-2069 choice of no / min / max colour if 'no attribu...
2017-11-07 gmungocJAL-2069 update spike branch with latest
2017-11-07 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-07 gmungocJAL-2069 add 'by attribute' options to graduated featur...
2017-11-07 gmungocJAL-2069 JAL-2808 utility method to build combobox...
2017-11-07 gmungocJAL-2820 limit length of residue tooltip
2017-11-06 gmungocJAL-2820 include attribute value used for feature colou...
2017-11-03 gmungocJAL-2808 attribute description as tooltip in dropdown...
2017-11-02 gmungocJAL-2808 spike updated with latest
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