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JAL-1483 cut and paste from SW score model to allow scores based on sequences to...
[jalview.git]
/
src
/
jalview
/
gui
/
2012-05-14
jprocter
JAL-1061,JAL-1075 - first pass at implementing sequence...
tree
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commitdiff
2012-05-14
jprocter
clean up old commented code
tree
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commitdiff
2012-05-10
jprocter
JAL-1075 better layout and info box for source browser
tree
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commitdiff
2012-05-01
jprocter
JAL-1075 tweak layout and test display for tree based...
tree
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commitdiff
2012-04-24
jprocter
JAL-1075, JAL-1061, JAL-1064 - introduced second tier...
tree
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commitdiff
2012-04-20
jprocter
JAL-1064 JAL-671 - add tree based database dialog as...
tree
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commitdiff
2012-04-20
jprocter
JAL-1064 - hack to create menu item label for each...
tree
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commitdiff
2012-04-11
jprocter
dialog for browsing and selecting datasources hierarchi...
tree
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commitdiff
2012-03-30
jprocter
(JAL-972) format tweak for source information box
tree
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commitdiff
2012-03-30
jprocter
Merge branch 'JAL-972-dasobert-to-jdas' into JAL-972...
tree
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commitdiff
2012-03-28
jprocter
JAL-1060 - prototype GUI with traffic light coding...
tree
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commitdiff
2012-03-27
jprocter
formatting
tree
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commitdiff
2012-03-27
jprocter
JAL-976 - tweak web services gui so empty menus don...
tree
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commitdiff
2012-03-05
jprocter
(JAL-942) comment out non-functional buttons in VARNA
tree
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commitdiff
2012-03-05
jprocter
(JAL-942) clearer view structure menu entry
tree
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commitdiff
2012-03-05
jprocter
JAL-942 - sensible name on window
tree
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commitdiff
2012-03-05
jprocter
JAL-942 - make sure rna structures get a sensible name
tree
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commitdiff
2012-03-02
jprocter
formatting
tree
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commitdiff
2012-03-02
jprocter
(JAL-942) more tweaking mapping between 2-struct and...
tree
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commitdiff
2012-03-02
jprocter
(JAL-842) debug mouseover for sequences that don't...
tree
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commitdiff
2012-03-02
jprocter
remove unnecessary method
tree
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commitdiff
2012-03-01
jprocter
(JAL-842) ensure deletions are accounted for when highl...
tree
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commitdiff
2012-03-01
jprocter
(JAL-893) update to VARNAv3.9-dev version
tree
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commitdiff
2012-03-01
jprocter
Merge branch 'Release_2_7_Branch' into develop
tree
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commitdiff
2012-03-01
jprocter
debug local source management buttons and formatting
tree
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commitdiff
2012-02-29
jprocter
tidy imports and switch over to use das source registry API
tree
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commitdiff
2012-02-29
jprocter
tidy imports
tree
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commitdiff
2012-02-29
jprocter
fallout from refactoring registry datamodel to a source...
tree
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commitdiff
2012-02-29
jprocter
(JAL-972) replaced biodas with jdas sources datastructu...
tree
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commitdiff
2012-02-13
jprocter
(JAL-972) jdas source retrieval and use of jdas structu...
tree
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commitdiff
2012-02-13
jprocter
change over source attribute datamodel
tree
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commitdiff
2012-02-13
jprocter
removed all dasobert code and begun to replace with...
tree
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commitdiff
2012-02-12
Jim Procter
(JAL-1022) reverted to original strategy of escaping...
tree
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commitdiff
2012-02-12
Jim Procter
(JAL-1050) ensure all filenames passed in to the load...
tree
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commitdiff
2012-02-12
Jim Procter
(JAL-1025 JAL-1022) File based equivalence used to...
tree
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commitdiff
2012-02-12
Jim Procter
(JAL-1049) only store state reference for sequence...
tree
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commitdiff
2012-02-12
Jim Procter
JAL-1025 JAL-1022 use File based equivalence to map...
tree
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commitdiff
2012-02-12
Jim Procter
JAL-715 - remove platform dependent includes
tree
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commitdiff
2011-12-14
jprocter
JAL-1033, JAL-1013 - ensure pca window shown only after...
tree
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commitdiff
2011-12-14
jprocter
JAL-1013 - rename nucleotide and ensure current calcula...
tree
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commitdiff
2011-12-13
jprocter
JAL-1013 - toy menu to switch between nucleotide and...
tree
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commitdiff
2011-12-08
jprocter
(JAL-1013) specify sequence type to ensure PCA calculat...
tree
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commitdiff
2011-12-08
jprocter
(JAL-1023) ensure filename is properly escaped before...
tree
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commitdiff
2011-12-08
jprocter
remove commented lines
tree
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commitdiff
2011-11-21
jprocter
Merge branch 'JAL-368_dragabovedesktop' into develop
tree
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commitdiff
2011-11-21
jprocter
(JAL-368) ensure window never gets a negative Y coordin...
tree
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commitdiff
2011-11-20
jprocter
Merge branch 'patch_JAL-1004' into develop
tree
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commitdiff
2011-11-20
jprocter
(JAL-1004) add mouse listener to internal panel
tree
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commitdiff
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into JAL-976_jabaws...
tree
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commitdiff
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into develop
tree
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commitdiff
2011-11-09
jprocter
(JAL-986) rendering to imageMap counts as rendering...
tree
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commitdiff
2011-11-09
jprocter
Merge branch 'JAL-986_idwidthprefs' into develop
tree
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commitdiff
2011-11-09
jprocter
(JAL-985,JAL-986) documentation and tooltips
tree
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commitdiff
2011-11-09
jprocter
(JAL-985,JAL-986) allow different ID margin calculation...
tree
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commitdiff
2011-11-09
jprocter
(JAL-985,JAL-986) preference widgets for settings
tree
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commitdiff
2011-11-04
jprocter
Merge branch 'JAL-980_jmol_patch' into develop
tree
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commitdiff
2011-11-04
jprocter
(JAL-980) update binding for refactored Jmol constants...
tree
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commitdiff
2011-11-03
jprocter
(JAL-978) discover JABA1 and JABA2 services and generat...
tree
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commitdiff
2011-11-03
jprocter
(JAL-978) refactored JABAWS2 service handle class to...
tree
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commitdiff
2011-10-28
jprocter
JAL-969 - refactor initialisation of automatic annotati...
tree
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commitdiff
2011-10-28
jprocter
(JAL-966) efficiency
tree
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commitdiff
2011-10-28
jprocter
(JAL-889) ensure annotation row is revalidated after...
tree
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commitdiff
2011-10-28
jprocter
(JAL-963) refactor RNA helix helper class to schemes
tree
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commitdiff
2011-10-27
jprocter
(JAL-969) fix logic bug introduced during refactoring
tree
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commitdiff
2011-10-27
jprocter
(JAL-969) removed TODOs
tree
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commitdiff
2011-10-27
jprocter
(JAL-969) refactored alignmentViewport base class to...
tree
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commitdiff
2011-10-21
jprocter
Refactored alignment viewport to use common base, exten...
tree
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commitdiff
2011-10-21
jprocter
extend alignPanel api with OOMHandler call to raise...
tree
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commitdiff
2011-10-21
jprocter
remove unnecessary import
tree
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commitdiff
2011-10-14
jprocter
(JAL-958) - normalised sequence logo for applet
tree
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commitdiff
2011-10-11
jprocter
normalised logo rendering (JAL-958)
tree
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commitdiff
2011-10-10
jprocter
(JAL-957) change splash screen and about to HTML text...
tree
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commitdiff
2011-10-10
jprocter
update author list in license for (JAL-826)
tree
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commitdiff
2011-10-07
jprocter
merge Jan and Lauren's RNA GUI changes into develop...
tree
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commitdiff
2011-10-04
jprocter
Merge remote-tracking branch 'remotes/origin/2_5_1_rna_...
tree
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commitdiff
2011-09-27
jprocter
same overzeaolous logic (JAL-915)
tree
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commitdiff
2011-09-27
jprocter
apply version 2.7 copyright
tree
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commitdiff
2011-09-26
jprocter
tweaked dialog layout. should consider refactoring
tree
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commitdiff
2011-09-26
jprocter
make news window a modal dialog on the jalview desktop...
tree
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commitdiff
2011-09-26
jprocter
avoid deprecation and ensure dialog close event is...
tree
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commitdiff
2011-09-25
jprocter
organise imports
tree
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commitdiff
2011-09-25
jprocter
more focus fixing (JAL-943)
tree
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commitdiff
2011-09-25
jprocter
fix logic to ensure first check for news is correct...
tree
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commitdiff
2011-09-23
jprocter
try even harder to get focus - for benefit of windows...
tree
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commitdiff
2011-09-23
jprocter
ensure blog window gets put to front after dialogs...
tree
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commitdiff
2011-09-22
jprocter
refactor and remove excess imports (JAL-943)
tree
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commitdiff
2011-09-22
jprocter
jalview rss reader based on jswingreader (JAL-943)
tree
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commitdiff
2011-09-16
jprocter
JAL-747 - made warning message friendlier and more...
tree
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commitdiff
2011-09-16
jprocter
JAL-574 added option to enable/disable 'follow selectio...
tree
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commitdiff
2011-09-16
jprocter
JAL-940 - removed legacy service options from preferenc...
tree
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commitdiff
2011-09-16
jprocter
JAL-468 JAL-936 sort alignment by tree and autosort...
tree
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commitdiff
2011-09-15
jprocter
JAL-860 fixed grammar for one structure vs many structu...
tree
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commitdiff
2011-09-15
jprocter
JAL-854 tweaked menu layout so services appear before...
tree
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commitdiff
2011-09-14
jprocter
JAL-934 - refactor to use label font functions
tree
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commitdiff
2011-09-14
jprocter
JAL-934 - refactor to use label font functions
tree
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commitdiff
2011-09-14
jprocter
JAL-934 - standard label font functions
tree
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commitdiff
2011-09-14
jprocter
patch for NPE (not clear if NPE is evidence of deeper...
tree
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commitdiff
2011-09-14
jprocter
JAL-766 JAL-733 - new alignment->jmol associations...
tree
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commitdiff
2011-09-14
jprocter
JAL-766 JAL-733 - new alignment->jmol associations...
tree
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commitdiff
2011-09-14
jprocter
JAL-766 JAL-733 - new alignment->jmol associations...
tree
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commitdiff
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