JAL-3253/JAL-3258 FileLoader fix for use of file.separator
[jalview.git] / src / jalview / gui /
2018-11-01 gmungocMerge branch 'feature/JAL-3144noJTree' into
2018-11-01 gmungocMerge branch 'Jalview-BH/JAL-3026' into
2018-11-01 gmungocJAL-3048 JAL-3056 reinstate save/load project, colour... Jalview-BH/JAL-3026
2018-10-31 Ben SoaresJAL-3141 Preferences 'Backups' tab now working. Doesn...
2018-10-31 gmungocMerge branch 'Jalview-BH/JAL-3026-JAL-3063-JAXB' into... feature/JAL-3144noJTree
2018-10-30 gmungocJAL-3144 left aligned looks better (and works in Jalvie...
2018-10-30 gmungocJAL-3144 close SequenceFetcher before opening PDB/Unipr...
2018-10-30 gmungocJAL-3144 spelling, Javadoc, abstract method for JalviewJS
2018-10-29 gmungocJAL-3144 SequenceFetcher without JDatabaseTree
2018-10-25 Ben SoaresJAL-3141 Ostensibly all backups working for alignment...
2018-10-17 Jim ProcterMerge branch 'feature/JAL-3063JAXB' into Jalview-BH...
2018-10-16 Jim ProcterJAL-3127 reinstate ability to set sequence ID colour...
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup to create & propag...
2018-10-16 Jim ProcterJAL-3127 use AlignViewportI.addGroup() to add group...
2018-10-16 Jim Procterviewport flag to indicate when structure view needs...
2018-10-09 Jim ProcterJAL-3127 TODO - resolve reference to Viewport for group...
2018-10-09 Jim ProcterJAL-3127 pass reference to AlignViewportI when creating...
2018-10-08 gmungocJAL-1244 comments, javadoc, method signature tweaks feature/JAL-1244stretchStatusMsg
2018-10-08 gmungocJAL-1244 editSequence extract method refactoring
2018-10-05 gmungocJAL-1244 improved status message for insert/delete gap
2018-10-04 gmungocJAL-3132 status message for sequence and/or graph group...
2018-10-04 gmungocJAL-1244 no status message (yet) for locked edit of...
2018-10-04 gmungocJAL-1244 status message for insert/delete gaps on singl...
2018-10-04 gmungocJAL-1244 status message while dragging a stretch group
2018-10-04 gmungocJAL-3132 set status message when over sequence id or...
2018-10-04 gmungocJAL-3093 unit tests, no mouse action over left/right...
2018-10-03 gmungocJAL-3093 tweaks to code and test for 3px gap above...
2018-10-02 gmungocJAL-3093 unit tests for SeqPanel.findMousePosition
2018-10-02 gmungocJAL-3093 limited Consensus popup menu when in wrapped...
2018-10-02 gmungocJAL-3093 added MousePos.isOverAnnotation() for extra...
2018-10-01 gmungocJAL-3093 'read-only' annotations when in wrapped mode
2018-10-01 gmungocJAL-3093 refactor (+test) Annotation Labels tooltip...
2018-10-01 gmungocJAL-3093 show annotation tooltips and status message...
2018-09-28 gmungocJAL-3063 service param files read/saved using JAXB...
2018-09-27 gmungocJAL-2791 refactored Export Features to apply all visibi...
2018-09-26 gmungocJAL-3125 tidy up
2018-09-26 gmungocJAL-3125 avoid slider 'rounding' threshold field value
2018-09-21 gmungocJAL-3120 preserve feature colour/mincolour/maxcolour... bug/JAL-3120restoreFeatureColour
2018-09-19 gmungocJAL-3120 preserve plain colour value when changing...
2018-09-19 Jim ProcterJAL-2808 JAL-3026 deleted all commented out tab code...
2018-09-19 gmungocJAL-2808 JAL-3032 drop tabbed layout for Colours and...
2018-09-19 gmungocJAL-3063 use JAXB for 'Save as Project' and load projec...
2018-09-18 gmungocJAL-3063 Save/Load user defined colours using JAXB
2018-09-18 gmungocJAL-3063 Save/Load user colour scheme using JAXB
2018-09-18 gmungocJAL-3063 New View via JAXB
2018-09-18 gmungocJAL-3063 temporary extra menu option to save/load proje...
2018-09-18 Jim ProcterJAL-3035 more dedasification
2018-09-14 gmungocJAL-3116 parse EMBL XML with JAXB (todo: update unit...
2018-09-11 gmungocJAL-3113 override minimum frame size in a way that...
2018-09-11 gmungocJAL-3048 recoded edit View Name dialog for JalviewJS
2018-09-11 Jim ProcterMerge branch 'develop' into releases/Release_2_11_Branch
2018-09-10 gmungocJAL-3099 use Alignment.getVisibleWidth() where wanted bug/JAL-3099alignmentVisibleWidth
2018-09-10 gmungocJAL-3097 adjust viewport width on hiding columns bug/JAL-3097blankExtraColumns
2018-09-10 gmungocJAL-3108 fix concurrency bug in Reveal action handler
2018-09-07 Jim ProcterJAL-3107 update any group associated annotation rows...
2018-09-07 Jim ProcterJAL-3105 fix for focus transfer after window closed...
2018-09-06 Jim ProcterJAL-3091 code committed in error (failed patch for...
2018-09-06 Jim ProcterJAL-3091 release notes for JAL-3104
2018-09-06 Jim ProcterJAL-2854 compute visible annotation panel height and...
2018-09-03 gmungocJAL-3079 drop use of clip region while drawing wrapped...
2018-08-31 Jim ProcterJAL-3095 account for sequence start when highlighting...
2018-08-31 Jim ProcterMerge branch 'releases/Release_2_10_5_Branch' of source...
2018-08-31 Jim Procterjava doc and fix for JAL-3095 - region of trimmed RNA...
2018-08-31 gmungocJAL-3003 remove redundant call to drawSelectionGroup
2018-08-31 gmungocMerge branch 'bug/JAL-3003epsWithSelection' into trialMerge
2018-08-30 gmungocMerge branch 'bug/JAL-247pngShowHiddenSeqMarks' into...
2018-08-30 gmungocJAL-3079 don't create new Graphics to draw as it confus...
2018-08-28 gmungocJAL-3059 use correct border colour for groups
2018-08-28 gmungocJAL-3003 draw selection group outline on main graphics...
2018-08-28 gmungocJAL-247 comment to clarify wrapped print algorithm
2018-08-28 gmungocJAL-247 print/export wrapped uses common code to draw...
2018-08-28 gmungocJAL-3087 include full alignment height in repeating...
2018-08-28 gmungocJAL-247 draw/print sequence ids now uses common code...
2018-08-27 hansonrJAL-3026 alignmentFrame.statusBar.setText -> .setStatus
2018-08-27 gmungocJAL-247 comment to clarify wrapped print algorithm bug/JAL-247pngShowHiddenSeqMarks
2018-08-27 hansonrJAL-3026 Jmol functioning; some issues
2018-08-24 gmungocJAL-247 print/export wrapped uses common code to draw...
2018-08-24 gmungocJAL-3087 include full alignment height in repeating...
2018-08-24 gmungocJAL-247 draw/print sequence ids now uses common code...
2018-08-24 hansonrJAL-3026 Java bug associated with File/String mods
2018-08-23 gmungocJAL-3059 use correct border colour for groups
2018-08-23 gmungocJAL-3003 draw selection group outline on main graphics...
2018-08-22 gmungocJAL-3049 JAL-3032 tidy/i18n code, remove redundant...
2018-08-21 gmungocJAL-2717 corrected i18n of colour scheme names
2018-08-20 gmungocJAL-3032 variant of Sequence Details panel for JalviewJS
2018-08-20 gmungocJAL-3084 force EPS output to "Text" for JalviewJS
2018-08-20 gmungocJAL-3084 hide startup file, Chimera, HTML/SVG, Web...
2018-08-17 gmungocJAL-3048 remove obsolete way of handling dialogs in...
2018-08-17 gmungocJAL-3048 adapt 'input from URL' dialog for JalviewJS
2018-08-16 gmungocJAL-3038 workaround to replace editable combobox with...
2018-08-16 gmungocMerge branch 'bug/JAL-3082selectRegex' into Jalview...
2018-08-16 gmungocJAL-3082 handle regex error, exclusive threshold, unit...
2018-08-15 gmungocJAL-3048 use JS-compatible JvOptionPane method
2018-08-15 gmungocMerge branch 'feature/JAL-3080clearTreeGroups' into...
2018-08-15 gmungocJAL-3080 remove tree partition if no groups created feature/JAL-3080clearTreeGroups
2018-08-14 gmungocJAL-3078 reset Tree font (only!) on Cancel bug/JAL-3078cancelTreeFont
2018-08-14 gmungocJAL-3032 tidy AlignmentProperties display for JalviewJS
2018-08-14 gmungocJAL-3056 no Save/Load colours xml in JalviewJS
2018-08-12 hansonrMerge branch 'Jalview-BH/JAL-3026' of https://source...
2018-08-12 hansonrJava2Script 3.2.2 upgrade
next