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JAL-1705 merge contiguous ranges when constructing a MapList (e.g. for
[jalview.git] / src / jalview / gui /
2016-01-25 gmungocJAL-1997 database browser support tooltip if available tree | commitdiff
2016-01-23 gmungocJAL-1355 get dialog title from message bundle tree | commitdiff
2016-01-23 gmungocJAL-1705 copy 'show sequence features' setting in ... tree | commitdiff
2016-01-21 gmungocJAL-1705 AlignmentUtils method renamed tree | commitdiff
2016-01-08 gmungocJAL-1705 DbSourceProxy properties converted to methods... tree | commitdiff
2016-01-05 gmungocMerge remote-tracking branch 'origin/features/JAL-1705_... tree | commitdiff
2015-12-22 gmungocJAL-653 realise virtual mappings and align when adding... tree | commitdiff
2015-12-22 gmungocJAL-391 new Calculate options to Reverse, Reverse Compl... tree | commitdiff
2015-12-22 gmungocJAL-653 AlignedCodonFrame collections changed from... tree | commitdiff
2015-12-22 gmungocJAL-653 set showSequenceFeatures=true on loading a... tree | commitdiff
2015-12-22 gmungocJAL-653 hold AlignedCodonFrame collections as list... tree | commitdiff
2015-12-03 gmungocJAL-653 code tidy / tests for 'realise gff mappings' tree | commitdiff
2015-11-30 gmungocJAL-653 (experimental) 'realise' dummy sequences in... tree | commitdiff
2015-11-30 gmungocJAL-1980 check for null alignment; JAL-1551 @Override... tree | commitdiff
2015-11-21 gmungocJAL-653 JAL-1968 FeaturesFile now handles Jalview or... tree | commitdiff
2015-10-15 Jim ProcterMerge branch 'develop' into features/JAL-1705_ensembl tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 formatting tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 add groups to codon-complement and notify... tree | commitdiff
2015-10-15 Jim ProcterJAL-1923 fix: don’t add group twice tree | commitdiff
2015-10-08 tcofoegbumerge tree | commitdiff
2015-10-07 Jim ProcterJAL-1894 source formatting tree | commitdiff
2015-10-05 gmungocJAL-1812 set/return currentAlFrame for Groovy in headle... tree | commitdiff
2015-10-05 Jim ProcterMerge branch 'develop' into features/JAL-1912_biojson... tree | commitdiff
2015-10-02 gmungocJAL-1815 restore split frame geometry including horizon... tree | commitdiff
2015-10-02 Jim ProcterJAL-1900 JAL-1625 disable iconify button for internal... tree | commitdiff
2015-09-30 tcofoegbuJAL-1912 added support of tcoffee annotation and other... tree | commitdiff
2015-09-29 tcofoegbuJAL-1896 fixed NPE for RNA Helice without equivalent... tree | commitdiff
2015-09-28 tcofoegbumerge tree | commitdiff
2015-09-28 tcofoegbuJAL-1896 revised implementation to construct a ColourSc... tree | commitdiff
2015-09-25 gmungocJAL-1859 try hoverDelay of 0.1s in Jmol for more respon... tree | commitdiff
2015-09-25 gmungocJAL-1815 restore split frame geometry correctly includi... tree | commitdiff
2015-09-24 tcofoegbuJAL-1860 keyboard operation of pdb sequence fetcher... tree | commitdiff
2015-09-21 gmungocJAL-1799 update height of annotation labels to match... tree | commitdiff
2015-09-18 tcofoegbuJAL-1774 JAL-1506 revised implementaion for clear highl... tree | commitdiff
2015-09-18 tcofoegbuJAL-1506 revised implementation to clear only selected... tree | commitdiff
2015-09-17 tcofoegbuJAL-1774 bugfix for misleading message after trying... tree | commitdiff
2015-09-16 tcofoegbumerge tree | commitdiff
2015-09-16 tcofoegbuJAL-1486 off-by-one error bugfix tree | commitdiff
2015-09-16 gmungocJAL-1885 small fix to isVersionStringLaterThan plus... tree | commitdiff
2015-09-14 gmungocJAL-1865 fixed so initial state of annotation sort... tree | commitdiff
2015-09-14 gmungocJAL-1880 handle sequence offsets properly when mapping... tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 licencing for new files in src tree | commitdiff
2015-09-10 Jim ProcterJAL-1645 source formatting and organise imports tree | commitdiff
2015-09-10 Jim ProcterJAL-1370 correct i18n message for reference sequence... tree | commitdiff
2015-09-10 Jim ProcterJAL-1370 detect any type of gap character in reference... tree | commitdiff
2015-09-07 gmungocJAL-1636 translate stop codon as '*', mouseover * as... tree | commitdiff
2015-09-06 Jim ProcterJAL-1655 transfer setting option only displayed in... tree | commitdiff
2015-09-06 Jim ProcterJAL-1645 JAL-1355 UI/i18n: added missing messages,... tree | commitdiff
2015-09-05 Jim ProcterJAL-1871 JAL-1553 don’t modify selection/view colour... tree | commitdiff
2015-09-04 Jim ProcterJAL-1847 added AUTOSUPERIMPOSE property which can be... tree | commitdiff
2015-09-03 Jim ProcterJAL-961 efficiency TODO: decouple overview updates... tree | commitdiff
2015-09-03 Jim ProcterJAL-1680 JAL-1576 JAL-1233 all conservation and consens... tree | commitdiff
2015-09-03 tcofoegbuhouse keeping tree | commitdiff
2015-09-03 tcofoegbumerge tree | commitdiff
2015-09-03 tcofoegbuJAL-1861 disable the action buttons for 1500 millisec... tree | commitdiff
2015-09-03 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2015-09-03 gmungocJAL-1690 scaleProteinAsCdna new optional attribute... tree | commitdiff
2015-09-03 tcofoegbuJAL-793 use default custom export settings for html... tree | commitdiff
2015-09-02 gmungocJAL-1768 set initial 'enabled' state for id width label... tree | commitdiff
2015-09-02 gmungocJAL-1768 enable fixed width output when auto-width... tree | commitdiff
2015-09-02 gmungocJAL-1843 fixed input/add from textbox; added @Override... tree | commitdiff
2015-09-02 Jim ProcterJAL-535 todo: refactor logic to desktop controller... tree | commitdiff
2015-09-01 tcofoegbuJAL-1668 house keeping tree | commitdiff
2015-08-31 tcofoegbumerge tree | commitdiff
2015-08-31 tcofoegbuJAL-1700 updated error handling with suggested improvem... tree | commitdiff
2015-08-27 gmungocJAL-1830 refactored so no jalview.gui references from... tree | commitdiff
2015-08-27 gmungocJAL-845 compacting duplicated code tree | commitdiff
2015-08-27 gmungocJAL-1611 debug sysout suppressed tree | commitdiff
2015-08-26 gmungocJAL-1830 dropped reference counts for mappings, instead... tree | commitdiff
2015-08-26 gmungocJAL-1840 correct setting status bar for structure mouseover tree | commitdiff
2015-08-25 gmungocJAL-1780 just a spelling change tree | commitdiff
2015-08-21 tcofoegbuclean up tree | commitdiff
2015-08-21 tcofoegbuJAL-1780 changed 'Check All' to 'Select All' and extern... tree | commitdiff
2015-08-20 tcofoegbumerge tree | commitdiff
2015-08-20 tcofoegbuJAL-1833 revised implementation tree | commitdiff
2015-08-20 gmungocJAL-1833 added unit tests (some failing) for wrapToolitp tree | commitdiff
2015-08-19 gmungocJAL-1742 suppress 'add chain' option for Jmol, pull... tree | commitdiff
2015-08-18 tcofoegbuJAL-1835 added UI for BioJSON embbeding preference tree | commitdiff
2015-08-18 tcofoegbuJAL-1834 added tooltip to the PDB sequence fetcher... tree | commitdiff
2015-08-18 tcofoegbuJAL-1833 modified tooltip to force wraping of long... tree | commitdiff
2015-08-17 tcofoegbumerge tree | commitdiff
2015-08-17 tcofoegbuJAL-1832 improvement to enable result update only when... tree | commitdiff
2015-08-17 gmungocJAL-1829 JAL-1830 refactoring for correct mapping ... tree | commitdiff
2015-08-17 gmungocJAL-1800 smarter matching when following mouseover... tree | commitdiff
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for... tree | commitdiff
2015-08-13 tcofoegbuJAL-1826 bug fix to select pdb sequence fetcher via... tree | commitdiff
2015-08-10 tcofoegbuJAL-1486 fixed flatfile output of visible region for... tree | commitdiff
2015-08-07 tcofoegbuJAL-1824 updated caching procedure for pdb entries... tree | commitdiff
2015-08-06 tcofoegbumerge tree | commitdiff
2015-08-06 tcofoegbuJAL-1824 corrected copy'n'paste error introduced from... tree | commitdiff
2015-08-05 Jim ProcterJAL-1821 formatting tree | commitdiff
2015-08-05 Jim ProcterJAL-1821 launch the structure view in a separate thread... tree | commitdiff
2015-08-05 Jim ProcterJAL-1822 create dataset sequences if they aren’t alread... tree | commitdiff
2015-08-05 Jim ProcterJAL-1821 JAL-1759 make sure we wait around until the... tree | commitdiff
2015-08-04 tcofoegbuJAL-1821 updated implementation of launchStructureViewe... tree | commitdiff
2015-08-04 tcofoegbuupdated the reference sequence column of cached structu... tree | commitdiff
2015-08-04 tcofoegbuJAL-1821 updated the reference sequence column of struc... tree | commitdiff
2015-07-30 tcofoegbuJAL-1443 modified exception notifications tree | commitdiff
2015-07-30 tcofoegbuJAL-1710 filtered colons(:) from structure chooser... tree | commitdiff
2015-07-23 Jim ProcterMerge branch 'features/JAL-1759jmolUpdate' into develop tree | commitdiff
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