source.jalview.org Git - jalview.git/tree

drwxr-xr-x		..
-rw-r--r--	284	.cvsignore	blob \| history \| raw
-rw-r--r--	1847	AlignExportSettings.java	blob \| history \| raw
-rw-r--r--	178217	AlignFrame.java	blob \| history \| raw
-rw-r--r--	30414	AlignViewport.java	blob \| history \| raw
-rw-r--r--	47705	AlignmentPanel.java	blob \| history \| raw
-rw-r--r--	17700	AnnotationChooser.java	blob \| history \| raw
-rw-r--r--	13872	AnnotationColourChooser.java	blob \| history \| raw
-rw-r--r--	26277	AnnotationColumnChooser.java	blob \| history \| raw
-rw-r--r--	8590	AnnotationExporter.java	blob \| history \| raw
-rwxr-xr-x	32141	AnnotationLabels.java	blob \| history \| raw
-rwxr-xr-x	24787	AnnotationPanel.java	blob \| history \| raw
-rw-r--r--	9209	AnnotationRowFilter.java	blob \| history \| raw
-rw-r--r--	34263	AppJmol.java	blob \| history \| raw
-rw-r--r--	5052	AppJmolBinding.java	blob \| history \| raw
-rw-r--r--	19377	AppVarna.java	blob \| history \| raw
-rw-r--r--	13926	AppVarnaBinding.java	blob \| history \| raw
-rw-r--r--	2710	AssociatePdbFileWithSeq.java	blob \| history \| raw
-rw-r--r--	23283	BlogReader.java	blob \| history \| raw
-rw-r--r--	38805	ChimeraViewFrame.java	blob \| history \| raw
-rw-r--r--	16451	Console.java	blob \| history \| raw
-rw-r--r--	5610	CutAndPasteHtmlTransfer.java	blob \| history \| raw
-rw-r--r--	9493	CutAndPasteTransfer.java	blob \| history \| raw
-rw-r--r--	22970	DasSourceBrowser.java	blob \| history \| raw
-rw-r--r--	86748	Desktop.java	blob \| history \| raw
-rw-r--r--	3913	EPSOptions.java	blob \| history \| raw
-rw-r--r--	2620	EditNameDialog.java	blob \| history \| raw
-rw-r--r--	15043	FeatureColourChooser.java	blob \| history \| raw
-rw-r--r--	12746	FeatureRenderer.java	blob \| history \| raw
-rw-r--r--	50592	FeatureSettings.java	blob \| history \| raw
-rwxr-xr-x	10095	Finder.java	blob \| history \| raw
-rwxr-xr-x	9418	FontChooser.java	blob \| history \| raw
-rw-r--r--	3318	HTMLOptions.java	blob \| history \| raw
-rw-r--r--	1894	Help.java	blob \| history \| raw
-rw-r--r--	1736	IProgressIndicator.java	blob \| history \| raw
-rw-r--r--	1218	IProgressIndicatorHandler.java	blob \| history \| raw
-rwxr-xr-x	11844	IdCanvas.java	blob \| history \| raw
-rwxr-xr-x	12948	IdPanel.java	blob \| history \| raw
-rwxr-xr-x	3954	IdwidthAdjuster.java	blob \| history \| raw
-rw-r--r--	14955	JDatabaseTree.java	blob \| history \| raw
-rw-r--r--	167765	Jalview2XML.java	blob \| history \| raw
-rwxr-xr-x	15404	Jalview2XML_V1.java	blob \| history \| raw
-rw-r--r--	1940	JalviewAppender.java	blob \| history \| raw
-rw-r--r--	2992	JalviewChangeSupport.java	blob \| history \| raw
-rw-r--r--	2620	JalviewChimeraBindingModel.java	blob \| history \| raw
-rw-r--r--	4237	JalviewDialog.java	blob \| history \| raw
-rw-r--r--	8372	JvSwingUtils.java	blob \| history \| raw
-rw-r--r--	2891	MenuChooser.java	blob \| history \| raw
-rw-r--r--	2640	OOMWarning.java	blob \| history \| raw
-rw-r--r--	23792	OptsAndParamsPage.java	blob \| history \| raw
-rw-r--r--	1023	OptsParametersContainerI.java	blob \| history \| raw
-rwxr-xr-x	11323	OverviewPanel.java	blob \| history \| raw
-rw-r--r--	19904	PCAPanel.java	blob \| history \| raw
-rw-r--r--	8560	PDBSearchPanel.java	blob \| history \| raw
-rwxr-xr-x	6338	PaintRefresher.java	blob \| history \| raw
-rwxr-xr-x	3988	PairwiseAlignPanel.java	blob \| history \| raw
-rw-r--r--	74782	PopupMenu.java	blob \| history \| raw
-rwxr-xr-x	32131	Preferences.java	blob \| history \| raw
-rw-r--r--	6085	ProgressBar.java	blob \| history \| raw
-rw-r--r--	6309	PromptUserConfig.java	blob \| history \| raw
-rwxr-xr-x	7896	RedundancyPanel.java	blob \| history \| raw
-rw-r--r--	7598	RestInputParamEditDialog.java	blob \| history \| raw
-rw-r--r--	15717	RestServiceEditorPane.java	blob \| history \| raw
-rwxr-xr-x	16642	RotatableCanvas.java	blob \| history \| raw
-rw-r--r--	4177	SVGOptions.java	blob \| history \| raw
-rwxr-xr-x	12725	ScalePanel.java	blob \| history \| raw
-rwxr-xr-x	23220	SeqCanvas.java	blob \| history \| raw
-rw-r--r--	48346	SeqPanel.java	blob \| history \| raw
-rwxr-xr-x	26154	SequenceFetcher.java	blob \| history \| raw
-rwxr-xr-x	13927	SequenceRenderer.java	blob \| history \| raw
-rwxr-xr-x	8354	SliderPanel.java	blob \| history \| raw
-rwxr-xr-x	9308	SplashScreen.java	blob \| history \| raw
-rw-r--r--	18268	SplitFrame.java	blob \| history \| raw
-rw-r--r--	28727	StructureChooser.java	blob \| history \| raw
-rw-r--r--	6253	StructureViewer.java	blob \| history \| raw
-rw-r--r--	5081	StructureViewerBase.java	blob \| history \| raw
-rw-r--r--	5743	TextColourChooser.java	blob \| history \| raw
-rwxr-xr-x	24960	TreeCanvas.java	blob \| history \| raw
-rwxr-xr-x	23307	TreePanel.java	blob \| history \| raw
-rwxr-xr-x	26848	UserDefinedColours.java	blob \| history \| raw
-rw-r--r--	5266	UserQuestionnaireCheck.java	blob \| history \| raw
-rw-r--r--	35078	VamsasApplication.java	blob \| history \| raw
-rw-r--r--	8289	ViewSelectionMenu.java	blob \| history \| raw
-rw-r--r--	21939	WebserviceInfo.java	blob \| history \| raw
-rw-r--r--	43178	WsJobParameters.java	blob \| history \| raw
-rw-r--r--	9916	WsParamSetManager.java	blob \| history \| raw
-rw-r--r--	17575	WsPreferences.java	blob \| history \| raw