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JAL-580 ensure WUSS annotation string is up to date, pair list regenerated if necessa...
[jalview.git] / src / jalview / gui /
2011-10-28 jprocter(JAL-963) refactor RNA helix helper class to schemes tree | commitdiff
2011-10-27 jprocter(JAL-969) fix logic bug introduced during refactoring tree | commitdiff
2011-10-27 jprocter(JAL-969) removed TODOs tree | commitdiff
2011-10-27 jprocter(JAL-969) refactored alignmentViewport base class to... tree | commitdiff
2011-10-21 jprocterRefactored alignment viewport to use common base, exten... tree | commitdiff
2011-10-21 jprocterextend alignPanel api with OOMHandler call to raise... tree | commitdiff
2011-10-21 jprocterremove unnecessary import tree | commitdiff
2011-10-14 jprocter(JAL-958) - normalised sequence logo for applet tree | commitdiff
2011-10-11 jprocternormalised logo rendering (JAL-958) tree | commitdiff
2011-10-10 jprocter(JAL-957) change splash screen and about to HTML text... tree | commitdiff
2011-10-10 jprocterupdate author list in license for (JAL-826) tree | commitdiff
2011-10-07 jproctermerge Jan and Lauren's RNA GUI changes into develop... tree | commitdiff
2011-10-04 jprocterMerge remote-tracking branch 'remotes/origin/2_5_1_rna_... tree | commitdiff
2011-09-27 jproctersame overzeaolous logic (JAL-915) tree | commitdiff
2011-09-27 jprocterapply version 2.7 copyright tree | commitdiff
2011-09-26 jproctertweaked dialog layout. should consider refactoring tree | commitdiff
2011-09-26 jproctermake news window a modal dialog on the jalview desktop... tree | commitdiff
2011-09-26 jprocteravoid deprecation and ensure dialog close event is... tree | commitdiff
2011-09-25 jprocterorganise imports tree | commitdiff
2011-09-25 jproctermore focus fixing (JAL-943) tree | commitdiff
2011-09-25 jprocterfix logic to ensure first check for news is correct... tree | commitdiff
2011-09-23 jproctertry even harder to get focus - for benefit of windows... tree | commitdiff
2011-09-23 jprocterensure blog window gets put to front after dialogs... tree | commitdiff
2011-09-22 jprocterrefactor and remove excess imports (JAL-943) tree | commitdiff
2011-09-22 jprocterjalview rss reader based on jswingreader (JAL-943) tree | commitdiff
2011-09-16 jprocterJAL-747 - made warning message friendlier and more... tree | commitdiff
2011-09-16 jprocterJAL-574 added option to enable/disable 'follow selectio... tree | commitdiff
2011-09-16 jprocterJAL-940 - removed legacy service options from preferenc... tree | commitdiff
2011-09-16 jprocterJAL-468 JAL-936 sort alignment by tree and autosort... tree | commitdiff
2011-09-15 jprocterJAL-860 fixed grammar for one structure vs many structu... tree | commitdiff
2011-09-15 jprocterJAL-854 tweaked menu layout so services appear before... tree | commitdiff
2011-09-14 jprocterJAL-934 - refactor to use label font functions tree | commitdiff
2011-09-14 jprocterJAL-934 - refactor to use label font functions tree | commitdiff
2011-09-14 jprocterJAL-934 - standard label font functions tree | commitdiff
2011-09-14 jprocterpatch for NPE (not clear if NPE is evidence of deeper... tree | commitdiff
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations... tree | commitdiff
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations... tree | commitdiff
2011-09-14 jprocterJAL-766 JAL-733 - new alignment->jmol associations... tree | commitdiff
2011-08-30 jprocterJAL-915 - ensured that exceptions are not raised in... tree | commitdiff
2011-08-30 jprocterJAL-715 rsbs service editing tree | commitdiff
2011-08-30 jprocterJAL-715 JalviewDialog for RSBS service editing pane tree | commitdiff
2011-08-29 jprocterJAL-919, JAL-715 - prototype service editing dialog... tree | commitdiff
2011-08-29 jprocterJAL-633, JAL-591 - refactored ArgumentI.getValue from... tree | commitdiff
2011-08-29 jprocterrefactored popup dialog boilerplate code to own class tree | commitdiff
2011-08-28 janengelhardtIncluding of VARNAv-3.9; tree | commitdiff
2011-08-25 jprocterconstructor only needs GUI container interface tree | commitdiff
2011-08-25 jprocterJAL-591 - refactored web service parameter dialog to... tree | commitdiff
2011-08-25 jprocterdebug dialog tree | commitdiff
2011-08-24 jprocterJAL-715 dialog for interactively editing a new or exist... tree | commitdiff
2011-08-24 jprocterrefactor labelled button creator to JvSwingUtils tree | commitdiff
2011-08-18 jprocterremove debug message tree | commitdiff
2011-08-18 jprocterfix for JAL-701 - ensure '<' appears in tooltip in... tree | commitdiff
2011-08-18 jprocterminor efficiency refactor tree | commitdiff
2011-08-17 jprocterJAL-853 use service action attribute to index services... tree | commitdiff
2011-08-17 jprocterremove any trailing '/' from the URL before validation... tree | commitdiff
2011-08-17 jprocteravoid NPE race condition when several threads waiting... tree | commitdiff
2011-08-17 jprocterfix for JAL-888 tree | commitdiff
2011-08-17 jprocterfix for JAL-888 tree | commitdiff
2011-08-17 jprocterJAL-867 - rejigged layout to a single splitpane wide... tree | commitdiff
2011-08-16 janengelhardtJAL-842; Text element containing the structure is not... tree | commitdiff
2011-08-15 janengelhardtJAL-891; Tooltips for Structure logos implemented; tree | commitdiff
2011-08-15 janengelhardtJAL-878; Structures associated to a sequence are availa... tree | commitdiff
2011-08-15 jprocterJAL-747 - warning dialog if Jalview can't resolve filen... tree | commitdiff
2011-08-15 janengelhardtJAL-891; Sorting of Structure logo implemented; bug... tree | commitdiff
2011-08-11 jprocteravoid NPE for null annotation element columns JAL-896 tree | commitdiff
2011-08-11 janengelhardtJAL-885; hasRNAStructure method was introduced to Align... tree | commitdiff
2011-08-10 janengelhardtJAL-885; Structure conservation row is just added if... tree | commitdiff
2011-08-09 janengelhardtJAL-891; base-pair logos can now be activated for structure tree | commitdiff
2011-08-08 janengelhardtJAL-891; structure logo is adapted to two char's; Missi... tree | commitdiff
2011-08-08 janengelhardtJAL-891; sequence logos are available on structure... tree | commitdiff
2011-08-05 jprocterallow several progress bars on the desktop window ... tree | commitdiff
2011-08-04 jprocterJAL-896 - patch to ensure arrows in different direction... tree | commitdiff
2011-08-04 jprocterJAL-883 - refactored and debugged arrow, stem and helix... tree | commitdiff
2011-07-31 janengelhardtJAL-885; StructureConservation row is displayed at... tree | commitdiff
2011-07-29 janengelhardtJAL-885; Implementation of StructureFrequency.java... tree | commitdiff
2011-07-28 jprocterrefer to local default setting for proxy when connecting to tree | commitdiff
2011-07-25 jprocteruse proper encoding for storing colour as user preferen... tree | commitdiff
2011-07-25 janengelhardtsome print statements to test things tree | commitdiff
2011-07-25 janengelhardtJAL-882; VARNA crashed when non-standard gaps where... tree | commitdiff
2011-07-25 janengelhardtJAL-878; Additional structures with a 'GR' tag in Stock... tree | commitdiff
2011-07-25 janengelhardtJAL-842; toy example to insert nucleotides in sequences... tree | commitdiff
2011-07-25 janengelhardtJAL-842; Implement transmitting of Jalview Sequence... tree | commitdiff
2011-07-25 janengelhardtJAL-842: some bugfixes; tree | commitdiff
2011-07-25 janengelhardtJAL-842; Added the TextField to edit structure in VARNA tree | commitdiff
2011-07-25 janengelhardtJAL-842; trimming single structures for single sequence... tree | commitdiff
2011-07-25 janengelhardtJAL-842; Give Varna frames name for window organizer... tree | commitdiff
2011-07-25 janengelhardtVarna external frame bug solved tree | commitdiff
2011-07-25 janengelhardtReorganize the class structure, unfortunately breaks... tree | commitdiff
2011-07-25 janengelhardtclean code tree | commitdiff
2011-07-25 janengelhardtFurther structure accessing feature tree | commitdiff
2011-07-25 janengelhardtChanged location of VARNAv3-8b.jar; small changes tree | commitdiff
2011-07-25 janengelhardtjal-842; sequence transmitting to Varna included tree | commitdiff
2011-07-25 janengelhardtJAL-842, AppVarnaBinding was filled with a minimalistic... tree | commitdiff
2011-07-25 janengelhardtJAL-842, Further creation of VARNA classes (probably... tree | commitdiff
2011-07-25 janengelhardtContainer for VARNA classes are created according to... tree | commitdiff
2011-07-25 janengelhardtJAL-841; Structure trigger token in jalview.io.Alignmen... tree | commitdiff
2011-07-25 janengelhardtStart merging of Laurens Code tree | commitdiff
2011-07-25 janengelhardtNew branch created and author list changed to test... tree | commitdiff
2011-07-22 jproctertodo for JAL-860 - associate multiple sequences with... tree | commitdiff
2011-07-22 jprocterensure propagation of colour change on annotation updat... tree | commitdiff
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