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JAL-1152 new Structure tab on Preferences for SS derivation / annotation
[jalview.git] / src / jalview / gui /
2014-11-05 gmungocJAL-1152 new Structure tab on Preferences for SS deriva... tree | commitdiff
2014-11-03 gmungocMerge branch 'features/JAL-1152annotationSorting' of... tree | commitdiff
2014-11-03 gmungocJAL-1152 annotation sorting preferences and help docume... tree | commitdiff
2014-11-03 Jim ProcterMerge branch 'develop' into features/JAL-1152annotation... tree | commitdiff
2014-11-03 Jim ProcterMerge branch 'bug/JAL-1250_redundance-removal' into... tree | commitdiff
2014-11-03 Jim ProcterMerge branch 'develop' into features/JAL-1152annotation... tree | commitdiff
2014-11-03 Jim Procterfix for JAL-1579 create threshold object for annotation... tree | commitdiff
2014-11-03 Jim ProcterJAL-1578 JAL-674 store/restore alignment annotation... tree | commitdiff
2014-10-31 gmungocJAL-1152 bug fix for 'no sort' case + tests for autocal... tree | commitdiff
2014-10-31 gmungocJAL-1152 menu tweaks plus new option to put Autocalc... tree | commitdiff
2014-10-30 Jim ProcterMerge branch 'develop' into features/ssFromPDBEntry tree | commitdiff
2014-10-30 gmungocJAL-1152 with sticky annotation sort order that updates... tree | commitdiff
2014-10-30 Jim ProcterJAL-674 register PDB IDs when ever they are resolved... tree | commitdiff
2014-10-30 Jim ProcterJAL-1551 format and tidy tree | commitdiff
2014-10-30 gmungocJAL-1152 prototype of new Annotations menu with sort... tree | commitdiff
2014-10-28 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2014-10-28 gmungocJAL-1264 refactor to add menu options to _both_ sequenc... tree | commitdiff
2014-10-28 Charles Ofoegbu2_8_2_Branch merge tree | commitdiff
2014-10-28 Charles OfoegbuJAL-1250 Redundancy removal bug fix for Applet version tree | commitdiff
2014-10-27 Jim ProcterMerge branch 'Release_2_8_2_Branch' into merge_r282_dev tree | commitdiff
2014-10-27 Charles OfoegbuUpdated RedundancyPanel.java to referesh the tree view... tree | commitdiff
2014-10-27 Charles OfoegbuPatch for redundancy removal tree | commitdiff
2014-10-23 Jim Procterpatch fixes JAL-1558 tree | commitdiff
2014-10-23 gmungocJAL-1264 further refactoring and tests tree | commitdiff
2014-10-21 Jim ProcterJAL-1551 reinstate missing import tree | commitdiff
2014-10-21 Jim ProcterJAL-674 initial implementation - only need to extract... tree | commitdiff
2014-10-16 Jim ProcterMerge branch 'feature/JAL-674_dssp' into features/JAL... features/JAL-1264_showHideAnnotations tree | commitdiff
2014-10-10 gmungocJAL-1481 wrap tooltip in html tree | commitdiff
2014-10-10 darolmarJAL-1420 tree | commitdiff
2014-10-10 darolmarJAL-1355 tree | commitdiff
2014-10-09 Jim Procterpatch fixes JAL-1558 tree | commitdiff
2014-10-08 gmungocMerge branch 'Release_2_8_2_Branch' into tree | commitdiff
2014-10-07 Jim ProcterJAL-1557 partial implementation - need to think about... tree | commitdiff
2014-10-07 Jim Procterpatch for JAL-1151 - select whole sequence when double... tree | commitdiff
2014-10-07 Jim ProcterJAL-1421 remove Vector and pass a list tree | commitdiff
2014-10-07 gmungocJAL-1264 wip tree | commitdiff
2014-10-07 gmungocJAL-1554 handle left-then-right click on sequence id tree | commitdiff
2014-10-03 Jim ProcterJAL-1355 removed all top level html tags from message... tree | commitdiff
2014-10-03 gmungocJAL-1264 javadoc update tree | commitdiff
2014-10-03 gmungocJAL-1506 delete all warning; JAL-1264 show/hide annotations tree | commitdiff
2014-10-03 gmungocJAL-1264 refactored show/hide annotation types includin... tree | commitdiff
2014-10-03 gmungocJAL-1481 search expression validation tree | commitdiff
2014-10-03 gmungocJAL-914 don't open help window twice tree | commitdiff
2014-10-03 Jim ProcterMerge branch 'Release_2_8_2_Branch' into Release_2_8_2_... tree | commitdiff
2014-09-26 darolmarJAL-1355 tree | commitdiff
2014-09-25 gmungocJAL-1264 tidy up use of MouseListener for showHideAnnot... tree | commitdiff
2014-09-25 gmungocJAL-1264 alternative (popup menu) way to show/hide... tree | commitdiff
2014-09-24 gmungocJAL-1264 further refactoring of panel + unit tests tree | commitdiff
2014-09-23 darolmarJAL-1355 tree | commitdiff
2014-09-23 gmungocJAL-1264 first cut of panel for annotation show/hide... tree | commitdiff
2014-09-19 darolmarJAL-1355 tree | commitdiff
2014-09-19 darolmarJAL-1355 tree | commitdiff
2014-09-18 gmungocMerge branch 'JAL-1360_Branch' into Release_2_8_2_Branch tree | commitdiff
2014-09-18 gmungocJAL-1360 Javadoc, Vector replaced with ArrayList, code... tree | commitdiff
2014-09-18 gmungocJAL-1360 refactored utility method to ColorUtils class tree | commitdiff
2014-09-17 gmungocCorrect colour for text when colour set tree | commitdiff
2014-09-17 gmungocJAL-1360 refactored for consistent lighter/darker for tree | commitdiff
2014-09-17 gmungocJAL-1360 workaround for user defined colours display... tree | commitdiff
2014-09-12 j.procter@dundee... JAL-1486 JAL-1543 pushed alignment viewport->view-... tree | commitdiff
2014-09-12 j.procter@dundee... formatting and organise imports tree | commitdiff
2014-09-12 j.procter@dundee... JAL-1486 fix: pass selected region to jalview.io via... tree | commitdiff
2014-07-22 j.procter@dundee... JAL-1333 more superposition debugging and deadlock... tree | commitdiff
2014-07-18 j.procter@dundee... JAL-1333 allow reuse of existing chimera for new or... tree | commitdiff
2014-07-18 j.procter@dundee... ensure the dataset is instantiated before materialising... tree | commitdiff
2014-07-08 j.procter@dundee... JAL-1333 allow reuse of existing viewers (of a specifie... tree | commitdiff
2014-07-04 j.procter@dundee... JAL-1333 more abstraction and refactoring and working... tree | commitdiff
2014-07-03 j.procter@dundee... Merge branch 'Release_2_8_2_Branch' into features/JAL... tree | commitdiff
2014-07-03 j.procter@dundee... Merge branch 'hotfix/JAL-1530' into develop tree | commitdiff
2014-07-03 j.procter@dundee... Merge branch 'hotfix/JAL-1530' into Release_2_8_2_Branch tree | commitdiff
2014-07-03 Jim Procterfixes JAL-1530 tree | commitdiff
2014-07-02 Jim ProcterJAL-1333 JAL-1527 refactors to create core structure... tree | commitdiff
2014-06-23 Jim ProcterJAL-1526 simple function to write a snapshot of the... tree | commitdiff
2014-06-12 Jim ProcterMerge branch 'hotfix/JAL-1524' into develop tree | commitdiff
2014-06-12 Jim ProcterMerge branch 'hotfix/JAL-1524' into Release_2_8_2_Branch tree | commitdiff
2014-06-12 Jim ProcterJAL-1524 fix tree | commitdiff
2014-06-06 Jim ProcterJAL-1519 make the splash screen larger/more readable tree | commitdiff
2014-06-06 Jim ProcterJAL-1519 fix author update issue (doh) tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 source formatting tree | commitdiff
2014-06-06 Jim ProcterJAL-1517 fix copyright for 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterJAL-1517 update copyright to version 2.8.2 tree | commitdiff
2014-06-05 Jim ProcterMerge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch tree | commitdiff
2014-06-03 Jim ProcterJAL-690 jvp rather than jar for save/restore state... tree | commitdiff
2014-06-03 Jim ProcterJAL-1473 exclude score models not compatible with PCA... tree | commitdiff
2014-05-23 Jim ProcterJAL-1445 extend functionality to select or toggle selec... tree | commitdiff
2014-05-22 Jim ProcterJAL-1503 update version in GPL header tree | commitdiff
2014-05-12 Jim ProcterMerge branch 'JAL-1397' into develop tree | commitdiff
2014-05-12 Jim ProcterJAL-1397 catch other random version strings tree | commitdiff
2014-05-12 Jim Procterpatch for regression introduced JAL-1397 tree | commitdiff
2014-05-02 Jim ProcterMerge branch 'JAL-1397' into develop tree | commitdiff
2014-05-02 Jim ProcterJAL-1397 JAL-1066 JAL-1233 refactored annotation colour... tree | commitdiff
2014-05-02 Jim ProcterJAL-1369 JAL-1397 version check to support correct... tree | commitdiff
2014-05-02 Jim Procterformatting tree | commitdiff
2014-05-01 Jim ProcterJAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and... tree | commitdiff
2014-05-01 Jim ProcterJAL-1497 check to see if tree structure is ready for... tree | commitdiff
2014-05-01 Jim Procterfix for JAL-1494 tweaked logic to fix NPEs and modify... tree | commitdiff
2014-04-29 Jim ProcterMerge branch 'JAL-1340_redundancy' into develop tree | commitdiff
2014-04-28 Jim ProcterJAL-1340 mark redundant sequences as soon as redundancy... tree | commitdiff
2014-04-28 Jim ProcterJAL-1340 simpler and more efficient interactive highlig... tree | commitdiff
2014-04-27 Jim ProcterMerge branch 'JAL-1322' into develop tree | commitdiff
2014-04-27 Jim ProcterJAL-1322 avoid rounding error causing non functional... tree | commitdiff
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