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JAL-2388 Update to hidden columns/column selection changes after merge
[jalview.git] / src / jalview / gui /
2017-01-20 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-19 gmungocJAL-2383 restore PID colour threshold from project... tree | commitdiff
2017-01-19 gmungocJAL-2370 corrected applet mouse drag, refactored into... tree | commitdiff
2017-01-17 gmungocJAL-1933 update threshold on focus lost in text field features/JAL-2295setChimeraAttributes tree | commitdiff
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2017-01-17 gmungocJAL-2370 fix bug when hiding a range including two... tree | commitdiff
2017-01-17 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit... tree | commitdiff
2017-01-17 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-12 gmungocJAL-2379 null references to PCA model when panel is... tree | commitdiff
2017-01-12 gmungocJAL-2344 now flagging formats as 'identifiable' instead... tree | commitdiff
2017-01-11 gmungocJAL-2344 separated AlignmentFileI into AlignmentFileRea... tree | commitdiff
2017-01-11 gmungocJAL-2344 FileFormats singleton for formats, FileFormatI... tree | commitdiff
2017-01-09 gmungocJAL-2371 remove ColourSchemeI.findColour(c), pure inter... tree | commitdiff
2017-01-09 kiramtMerge remote-tracking branch 'origin/develop' into... tree | commitdiff
2017-01-06 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit... tree | commitdiff
2017-01-06 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-05 gmungocJAL-2374 fix popup out by one and multiple groups bugs tree | commitdiff
2017-01-05 gmungocMerge branch 'features/JAL-2360colourSchemeApplicabilit... tree | commitdiff
2017-01-05 gmungocMerge branch 'develop' into features/JAL-2360colourSche... tree | commitdiff
2017-01-05 gmungocJAL-2373 set state of Above PID, By Conservation in... tree | commitdiff
2017-01-05 gmungocJAL-2371 tests added tree | commitdiff
2017-01-04 gmungocJAL-2371 CollectionColourScheme wraps ColourSchemeI tree | commitdiff
2016-12-29 gmungocJAL-2630 first pass groovy colour scheme (with slight... tree | commitdiff
2016-12-23 gmungocJAL-2360 removed UserDefinedColours.userColourSchemes tree | commitdiff
2016-12-22 gmungocJAL-2360 fix bug that prematurely created a SequenceGroup tree | commitdiff
2016-12-22 gmungocJAL-2360 structure viewers now using ColourMenuHelper... tree | commitdiff
2016-12-21 gmungocJAL-2360 set new/loaded colour scheme name correctly tree | commitdiff
2016-12-21 gmungocJAL-2360 ColourMenuHelper now builds and selects items... tree | commitdiff
2016-12-21 gmungocJAL-2360 fix incorrect action on Cancel user defined... tree | commitdiff
2016-12-20 gmungocJAL-2360 testRegisterColourScheme to demonstrate a... tree | commitdiff
2016-12-20 gmungocJAL-2360 ColourSchemes holds configured schemes, AlignF... tree | commitdiff
2016-12-19 gmungocJAL-2361 select colour menu item by matching its name... tree | commitdiff
2016-12-16 kiramtJAL-2316 Added database name column to URL links table... tree | commitdiff
2016-12-16 gmungocJAL-2346 ensure view updates when annotation options... tree | commitdiff
2016-12-16 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice tree | commitdiff
2016-12-16 gmungocJAL-2360 getColour() renamed to getColourScheme(),... tree | commitdiff
2016-12-16 gmungocJAL-2360 refactoring for JalviewColourScheme enum, tree | commitdiff
2016-12-15 kiramtJAL-2316 Changes following review. tree | commitdiff
2016-12-13 kiramtMerge branch 'develop' into features/JAL-2316 tree | commitdiff
2016-12-13 gmungocJAL-2361 adding items to applet colour menus, TCoffee... tree | commitdiff
2016-12-12 gmungocJAL-2361 extract methods to (re-)build colour menu tree | commitdiff
2016-12-12 gmungocJAL-1544 backgroud -> background tree | commitdiff
2016-12-12 kiramtJAL-2316 Added GUI checks for duplicate link ids tree | commitdiff
2016-12-12 kiramtJAL-2316 Unit test update to UrlLinkTableModel and... tree | commitdiff
2016-12-12 kiramtJAL-2316 Added jalview.urls.* packages tree | commitdiff
2016-12-09 kiramtJAL-2316 Unit test updates and associated minor changes... tree | commitdiff
2016-12-09 gmungocJAL-1895 suppress RNA interaction colour option tree | commitdiff
2016-12-08 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-12-08 gmungocJAL-2359 add Window menu entry only after all danger... tree | commitdiff
2016-12-07 gmungocJAL-2344 handle null format, simplify JalviewFileChoose... tree | commitdiff
2016-12-07 kiramtJAL-2316 Restructure identifiers.org download tree | commitdiff
2016-12-05 gmungocJAL-2346 JAL-1553 pull-up / push-down of fields and... tree | commitdiff
2016-12-05 kiramtJAL-2316 Added UrlProvider factories. Tidied up labelling. tree | commitdiff
2016-12-05 gmungocJAL-1753 JAL-1596 JAL-1933 ensure AWT updates are on... tree | commitdiff
2016-12-05 kiramtJAL-2316 Adjusted unit tests. Tidied UrlLinkProviderI... tree | commitdiff
2016-12-02 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-12-02 gmungocUnit tests added, minor refactoring tree | commitdiff
2016-12-02 kiramtJAL-2316 GUI updates to Connections tab in Preferences... tree | commitdiff
2016-12-01 gmungocJAL-2346 unused method removed tree | commitdiff
2016-12-01 gmungocJAL-2346 save annotation id instead of label with annot... tree | commitdiff
2016-12-01 gmungocJAL-2346 restore choice of annotation for colouring... tree | commitdiff
2016-11-30 Jim ProcterMerge branch 'features/JAL-2320_closeChimeraAction... tree | commitdiff
2016-11-29 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-29 gmungocJAL-2344 FileFormat.isStructureFile replaces tree | commitdiff
2016-11-28 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-28 tcofoegbuMerge branch 'features/JAL-2326_JOptionPane-refactoring... tree | commitdiff
2016-11-25 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2016-11-25 gmungocJAL-2344 use .equals() to compare FileFormatI objects tree | commitdiff
2016-11-24 gmungocDistinguish text-only output formats and others (.jar... tree | commitdiff
2016-11-24 tcofoegbuJAL-2326 updated references of JOptionPane to JvOptionPane tree | commitdiff
2016-11-24 gmungocFurther tweaks to get tests passing tree | commitdiff
2016-11-24 tcofoegbuJAL-2326 added layer of abstraction between Jalview... tree | commitdiff
2016-11-24 gmungocFileFormatI further tweaks, clean compile tree | commitdiff
2016-11-23 Jim ProcterMerge branch 'bug/JAL-2323disulfideOverview' into develop tree | commitdiff
2016-11-23 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-22 tcofoegbuMerge branch 'bug/JAL-2277_refactorPrintUnwrapped'... tree | commitdiff
2016-11-22 gmungocJAL-2337 fix: only adjust once for scroll offset bug/JAL-2277_refactorPrintUnwrapped tree | commitdiff
2016-11-22 Jim ProcterMerge branch 'features/JAL-1738_JAL-345_selectionfromhi... tree | commitdiff
2016-11-22 Jim ProcterJAL-1738 JAL-345 changed keystroke to ‘B’ (with modifie... tree | commitdiff
2016-11-22 gmungocJAL-2277 refactored AlignmentPanel.printUnwrapped to... tree | commitdiff
2016-11-21 tcofoegbuJAL-2277 bug fix for mis-alligned graphics output for... tree | commitdiff
2016-11-21 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2016-11-21 tcofoegbuJAL-2332 bugfix to enable structure chooser opening... tree | commitdiff
2016-11-21 gmungocMerge branch 'develop' into bug/JAL-2323disulfideOverview tree | commitdiff
2016-11-17 gmungocJAL-2327 disulfide bond abstracted to SequenceFeature... tree | commitdiff
2016-11-16 Jim ProcterMerge branch 'features/JAL-1723_sequenceReport' into... tree | commitdiff
2016-11-16 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-15 kiramtJAL-2316 Moved url providers into own package tree | commitdiff
2016-11-15 kiramtJAL-2316 Refactoring of functionality to provide urls... tree | commitdiff
2016-11-14 tcofoegbuJAL-2322 Refactored unified architecture for data ... tree | commitdiff
2016-11-14 gmungocJAL-2295 JAL-2296 skeleton 'attributes to features... tree | commitdiff
2016-11-14 kiramtUrl links changes - incomplete checkin as battery low tree | commitdiff
2016-11-11 tcofoegbuJAL-2277 Refactored out duplicated method - printUnwrap... tree | commitdiff
2016-11-11 gmungocJAL-2295 improved integrity of 'isFinishedInit' flag tree | commitdiff
2016-11-11 gmungocJAL-2295 set finishedInit to false before checking... tree | commitdiff
2016-11-10 tcofoegbuBugfix to enable accurate chain extraction/association... tree | commitdiff
2016-11-10 gmungocJAL-2320 added getViewer() method to return Chimera... tree | commitdiff
2016-11-07 gmungocMerge branch 'develop' into features/JAL-2295setChimera... tree | commitdiff
2016-11-07 gmungocJAL-2282 show url links that need checked; remove ... tree | commitdiff
2016-11-07 gmungocJAL-2295 handle no progress bar message properly tree | commitdiff
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