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JAL-2507 fix test: knockon from capitalisation on secondary structure from stockholm...
[jalview.git] / src / jalview / gui /
2017-05-09 gmungocJAL-1632 correct i18n and NPE tree | commitdiff
2017-05-08 gmungocJAL-1632 i18n for warning messages tree | commitdiff
2017-05-08 kiramtJAL-2512 Fix to show non-gap positions in None colour... tree | commitdiff
2017-05-04 gmungocJAL-2506 allow graduated colour as default in new Seque... tree | commitdiff
2017-05-04 gmungocJAL-2510 ensure modified feature type is displayed tree | commitdiff
2017-05-04 gmungocMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-04 gmungocJAL-2504 allow feature type to be specified for Create... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into... tree | commitdiff
2017-05-04 tcofoegbuMerge branch 'develop' of https://source.jalview.org... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2503_filteronquantitativeann... tree | commitdiff
2017-05-04 Jim ProcterMerge branch 'features/JAL-2393customMatrices' into... tree | commitdiff
2017-05-03 Jim ProcterJAL-2393 JAL-2416 refresh the score model menu when... features/JAL-2393customMatrices tree | commitdiff
2017-05-03 Jim ProcterJAL-2503 show threshold slider for quantitative annotat... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 honour percentage checkbox when entering value... tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 recover state for ‘display percentage’ checkbox tree | commitdiff
2017-05-03 Jim ProcterJAL-2432 simplify code tree | commitdiff
2017-05-02 Jim ProcterJAL-1632 validate CalculationChooser when selection... tree | commitdiff
2017-05-02 Jim ProcterJAL-1632 enable/disable CalculationChooser buttons... tree | commitdiff
2017-05-02 Jim ProcterJAL-1632 compare size of input against minimums for... tree | commitdiff
2017-05-02 Jim ProcterJAL-1632 OK->Calculate, Cancel->Close buttons tree | commitdiff
2017-05-02 Jim ProcterJAL-1632 removed ‘tree’ option and changed dialog layout tree | commitdiff
2017-05-02 gmungocJAL-2499 inlined two 1-line methods tree | commitdiff
2017-05-02 gmungocJAL-2499 JAL-2403 push 'configure for view' inside... tree | commitdiff
2017-04-28 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 use constant for preference token tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 desktop preferences for occupancy tree | commitdiff
2017-04-27 Jim ProcterJAL-1933 showOccupancy applet parameter and SHOW_OCCUPA... tree | commitdiff
2017-04-27 Jim ProcterJAL-2432 desktop: filter/select columns by threshold... tree | commitdiff
2017-04-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-24 kiramtJAL-2439 Fixed opposite out-by-one problem in wrapped... tree | commitdiff
2017-04-24 kiramtJAL-2439 Fix to hidden column marker being one row... tree | commitdiff
2017-04-21 gmungocJAL-2423 tweak tree panel title, add Spanish text tree | commitdiff
2017-04-12 gmungocJAL-1632 removed check for aligned sequences for Tree... tree | commitdiff
2017-04-12 gmungocJAL-1632 remove unused check for sequences aligned tree | commitdiff
2017-04-12 gmungocJAL-1632 one PCA/Tree per panel, closed when panel... tree | commitdiff
2017-04-11 tcofoegbuPull from develop features/JAL-2473_set-minimium-dimensions tree | commitdiff
2017-04-11 tcofoegbuJAL-2473 removed unused fields in JalviewDialog tree | commitdiff
2017-04-11 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-10 tcofoegbuMerge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... tree | commitdiff
2017-04-10 tcofoegbuJAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux tree | commitdiff
2017-04-10 tcofoegbuMerge branch 'develop' into bug/JAL-2255_seq-fetcher... tree | commitdiff
2017-04-10 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-10 tcofoegbuJAL-2473 added improvement to apply default / custom... tree | commitdiff
2017-04-10 gmungocJAL-2361 option to save on OK of changed named colour... tree | commitdiff
2017-04-07 gmungocJAL-2393 code tidying for review comments tree | commitdiff
2017-04-07 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-04-06 gmungocJAL-2361 make a modified saved scheme the backout check... tree | commitdiff
2017-04-05 gmungocJAL-2361 simplify constructors, select unsaved but... tree | commitdiff
2017-04-05 gmungocJAL-2361 apply any saved changes to current colour... tree | commitdiff
2017-04-03 gmungocMerge branch 'develop' into bug/JAL-2314 tree | commitdiff
2017-03-31 gmungocMerge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView tree | commitdiff
2017-03-30 gmungocJAL-1608 leave Create Group, Remove Group menu items... tree | commitdiff
2017-03-30 gmungocJAL-2401 code and help tidy for review comments tree | commitdiff
2017-03-30 gmungocJAL-2401 don't apply lower case colour to upper case tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour tree | commitdiff
2017-03-30 gmungocMerge branch 'develop' into bug/JAL-2346annotationChoice tree | commitdiff
2017-03-29 gmungocMerge branch 'develop' into bug/JAL-1608createGroups tree | commitdiff
2017-03-27 gmungocJAL-2416 tooltip with descriptions for score models... tree | commitdiff
2017-03-27 gmungocJAL-2416 add score model description field for tooltip... tree | commitdiff
2017-03-24 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-24 gmungocJAL-2428 simplify TreeModel constructors, add getOrigin... tree | commitdiff
2017-03-24 Jim ProcterJAL-2360 fix applet build by separating castor XML... tree | commitdiff
2017-03-24 gmungocJAL-1632 TreeChooser renamed CalculationChooser, text... tree | commitdiff
2017-03-24 gmungocJAL-1632 named parameters tree | commitdiff
2017-03-24 kiramtJAL-2314 Tidy up tree | commitdiff
2017-03-24 gmungocJAL-2464 fix cancel tree print behaviour tree | commitdiff
2017-03-24 gmungocJAL-838 move two callers off Comparison.PID and depreca... tree | commitdiff
2017-03-23 kiramtJAL-2314 Tweaks to stop thread sync issues tree | commitdiff
2017-03-23 gmungocJAL-1632 suppress PID parameter options in Tree/PCA... tree | commitdiff
2017-03-23 gmungocJAL-2464 fix cancel tree print behaviour tree | commitdiff
2017-03-23 kiramtJAL-2314 Tidies tree | commitdiff
2017-03-23 gmungocMerge branch 'develop' into features/JAL-2393customMatrices tree | commitdiff
2017-03-22 kiramtJAL-2388 Reinstated original overview checks for annota... tree | commitdiff
2017-03-22 kiramtMerge remote-tracking branch 'origin/develop' into tree | commitdiff
2017-03-21 gmungocJAL-2438 removed (non-functional) lastSeq, lastSequence... tree | commitdiff
2017-03-21 gmungocJAL-2243 update discovered features on opening structur... tree | commitdiff
2017-03-21 Jim ProcterMerge branch 'features/JAL-2388OverviewWindow' into... tree | commitdiff
2017-03-20 Jim ProcterMerge branch 'bug/JAL-2421overviewboxflicker' into... tree | commitdiff
2017-03-20 kiramtJAL-2388 Comment typo tree | commitdiff
2017-03-16 kiramtJAL-2388 Applied ViewportRanges to code tree | commitdiff
2017-03-16 kiramtJAL-2388 Renamed viewport position props to viewport... tree | commitdiff
2017-03-15 gmungocJAL-2431 show cDNA consensus after New View in split... tree | commitdiff
2017-03-15 kiramtJAL-2388 Unit tests and tidies tree | commitdiff
2017-03-15 gmungocJAL-2443 push getResidueBoxColour inside getResidueColour tree | commitdiff
2017-03-14 kiramtJAL-2439 Fixes to out-by-one sequence indexing in gui... tree | commitdiff
2017-03-13 gmungocJAL-2438 FeatureColourFinder refactored from FeatureRen... tree | commitdiff
2017-03-09 kiramtJAL-2388 Minor fix for annotation graph, removed unit... tree | commitdiff
2017-03-07 gmungocJAL-2295 status messages for Chimera attributes set... tree | commitdiff
2017-03-07 kiramtJAL-2388 Missed commit tree | commitdiff
2017-03-06 kiramtJAL-2388 Dependency tidy tree | commitdiff
2017-03-06 kiramtJAL-2388 Remove OverviewDimensions dependency on gui... tree | commitdiff
2017-03-06 kiramtJAL-2388 Corrected overview panel behaviour, updated... tree | commitdiff
2017-03-06 gmungocJAL-2428 separate TreeModel from TreeBuilder/NJTree... tree | commitdiff
2017-03-03 kiramtJAL-2388 Initial removal of hidden cols/seqs out of... tree | commitdiff
2017-03-02 gmungocJAL-2295 tweak order and wording of Superpose menu... tree | commitdiff
2017-03-02 gmungocJAL-2295 make 'Jmol' menu appear; enable/disable Superp... tree | commitdiff
2017-03-01 kiramtJAL-2388 Reverted to previous tree | commitdiff
2017-03-01 gmungocMerge branch 'features/JAL-2295setChimeraAttributes... tree | commitdiff
2017-03-01 kiramtJAL-2388 Preliminary refactor check-in, does not compile tree | commitdiff
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