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[jalview.git] / src / jalview / io / JSONFile.java

2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff
2017-08-21	gmungoc	Merge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList	blob \| commitdiff
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-07-24	gmungoc	spike branch updated from latest features/JAL-2446	blob \| commitdiff \| diff to current
2017-06-27	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-06-07	kiramt	JAL-2591 Hidden columns regions can be output to string...	blob \| commitdiff \| diff to current
2017-06-07	kiramt	JAL-2591 simplifying hidden columns usage	blob \| commitdiff \| diff to current
2017-05-22	gmungoc	JAL-2546 JAL-2490 efficient lookup of features, correct...	blob \| commitdiff \| diff to current
2017-05-15	gmungoc	Merge branch 'develop' into features/JAL-2446NCList	blob \| commitdiff \| diff to current
2017-05-08	gmungoc	JAL-2505 set type,desc,begin,end,group,score in Sequenc...	blob \| commitdiff \| diff to current
2017-05-05	kiramt	Merge remote-tracking branch	blob \| commitdiff \| diff to current
2017-05-05	kiramt	Merge remote-tracking branch 'origin/develop' into	blob \| commitdiff \| diff to current
2017-05-01	gmungoc	JAL-2489 JAL-2371 reinstate calls to	blob \| commitdiff \| diff to current
2017-04-26	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-04-26	kiramt	Merge remote-tracking branch 'origin/develop' into...	blob \| commitdiff \| diff to current
2017-04-25	tcofoegbu	JAL-2489 bug fix	blob \| commitdiff \| diff to current
2017-04-25	kiramt	JAL-2388 Working hidden regions hide/show in desktop	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Finished split of hidden columns and selected...	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Hidden cols separated from column selection...	blob \| commitdiff \| diff to current
2017-03-13	gmungoc	JAL-2438 FeatureColourFinder refactored from FeatureRen...	blob \| commitdiff \| diff to current
2017-01-04	gmungoc	JAL-2371 CollectionColourScheme wraps ColourSchemeI	blob \| commitdiff \| diff to current
2016-12-16	gmungoc	JAL-2360 refactoring for JalviewColourScheme enum,	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-08-30	gmungoc	Merge branch 'develop' into features/filetypeEnum	blob \| commitdiff \| diff to current
2016-08-22	gmungoc	JAL-2175 code/test fixes/tidy for PFAM/MSF/JSON roundtrip	blob \| commitdiff \| diff to current
2016-07-18	gmungoc	fileFormat enum wip changes	blob \| commitdiff \| diff to current
2016-07-11	gmungoc	file format enum wip changes	blob \| commitdiff \| diff to current
2016-06-22	gmungoc	JAL-1982 defensive checks for null annotations array	blob \| commitdiff \| diff to current
2016-03-23	tcofoegbu	JAL-2009 added programmatic custom feature setting...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	Merge branch 'develop' into Release_2_9_0b1_Branch	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 organise imports	blob \| commitdiff \| diff to current
2015-10-08	tcofoegbu	merge	blob \| commitdiff \| diff to current
2015-10-07	Jim Procter	JAL-1894 source formatting	blob \| commitdiff \| diff to current
2015-10-07	tcofoegbu	JAL-1912 added documentation features/JAL-1912_biojson-per-sequence-annotation	blob \| commitdiff \| diff to current
2015-10-05	tcofoegbu	JAL-1912 house keeping	blob \| commitdiff \| diff to current
2015-10-05	Jim Procter	Merge branch 'develop' into Release_2_9_0b1_Branch	blob \| commitdiff \| diff to current
2015-10-05	tcofoegbu	JAL-1912 updated AnnotationDisplaySettingPojo	blob \| commitdiff \| diff to current
2015-10-01	tcofoegbu	JAL-1912 Double.NaN breaks JSON serialization - added...	blob \| commitdiff \| diff to current
2015-10-01	tcofoegbu	JAL-1912 refactor annotation refsequence assignemnt...	blob \| commitdiff \| diff to current
2015-09-30	tcofoegbu	JAL-1912 added support of tcoffee annotation and other...	blob \| commitdiff \| diff to current
2015-09-29	tcofoegbu	JAL-1896 fixed NPE for RNA Helice without equivalent...	blob \| commitdiff \| diff to current
2015-09-28	tcofoegbu	JAL-1896 revised implementation to construct a ColourSc...	blob \| commitdiff \| diff to current
2015-09-24	tcofoegbu	JAL-1896 bugfix to enabled Jalview restore clustal...	blob \| commitdiff \| diff to current
2015-09-22	Jim Procter	Merge branch 'develop' into Release_2_9_0b1_Branch	blob \| commitdiff \| diff to current
2015-09-16	tcofoegbu	JAL-1881 Bugfix for annotation import from BioJS	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-03	tcofoegbu	JAL-793 use default custom export settings for html...	blob \| commitdiff \| diff to current
2015-08-14	tcofoegbu	JAL-1831 added changes to allow auto-generation of...	blob \| commitdiff \| diff to current
2015-08-13	tcofoegbu	JAL-1641 added type to BioJSON sequence object and...	blob \| commitdiff \| diff to current
2015-08-11	tcofoegbu	add ability to launch jalview from exported html +...	blob \| commitdiff \| diff to current
2015-06-30	tcofoegbu	JAL-1641 round trip test/refactoring	blob \| commitdiff \| diff to current
2015-06-26	tcofoegbu	JAL-1641 fixed broken functionalities after refactor	blob \| commitdiff \| diff to current
2015-06-22	Jim Procter	JAL-1780 JAL-653 Format/AppletFormat import and export...	blob \| commitdiff \| diff to current
2015-06-18	Jim Procter	JAL-1780 JAL-653 moved AlignExportSettings reference...	blob \| commitdiff \| diff to current
2015-06-17	Jim Procter	JAL-1784 refactor parse method to directly parse FilePa...	blob \| commitdiff \| diff to current
2015-06-17	tcofoegbu	JAL-1780 more support for export setting for flatfile... features/JAL-1780_export-settings_flatfile	blob \| commitdiff \| diff to current
2015-06-15	tcofoegbu	JAL-1641 clean up	blob \| commitdiff \| diff to current
2015-06-15	tcofoegbu	clean up	blob \| commitdiff \| diff to current
2015-06-12	tcofoegbu	JAL-1641 refactor	blob \| commitdiff \| diff to current
2015-06-10	tcofoegbu	updated build.xml	blob \| commitdiff \| diff to current
2015-06-10	tcofoegbu	JAL-1641 updated applet version	blob \| commitdiff \| diff to current
2015-06-05	tcofoegbu	JAL-1760 JAL-1641 Serialisation of Hidden Seqs and...	blob \| commitdiff \| diff to current
2015-06-04	tcofoegbu	JAL-1641 updated json schema to make it more generic...	blob \| commitdiff \| diff to current
2015-06-02	tcofoegbu	JAL-1641 applet build fix	blob \| commitdiff \| diff to current
2015-06-01	tcofoegbu	JAL-1641 remove all refs/imports from gui package	blob \| commitdiff \| diff to current
2015-05-25	tcofoegbu	build fix	blob \| commitdiff \| diff to current
2015-05-20	tcofoegbu	JAL-1541 minor code clean up, and added test for BioJsH...	blob \| commitdiff \| diff to current
2015-05-19	tcofoegbu	JAL-1641 Further refactoring of JSON export option...	blob \| commitdiff \| diff to current
2015-05-12	tcofoegbu	JAL_1641 added unit test and minor house keeping	blob \| commitdiff \| diff to current
2015-05-11	tcofoegbu	JAL-1641 cherry-picked changes into develop compatible...	blob \| commitdiff \| diff to current

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