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elementAt instead of get for 1.1 compatibility
[jalview.git] / src / jalview / io /
2005-08-03 amwaterhouseFileLoading removed from desktop tree | commitdiff
2005-07-29 amwaterhouseuse 1 & -1 if start/end not specified tree | commitdiff
2005-07-11 amwaterhousethis.installIcons tree | commitdiff
2005-07-06 amwaterhouseSequence to Uppercase before checksum tree | commitdiff
2005-06-30 amwaterhouseFormatting changes tree | commitdiff
2005-06-16 amwaterhousedont convert to uppercase tree | commitdiff
2005-06-15 amwaterhouseuse .jalview.uniprot.xml tree | commitdiff
2005-06-14 amwaterhousechange name of uniprot file tree | commitdiff
2005-06-14 jprocterArbitrary decision to keep friendly id name when readin... tree | commitdiff
2005-06-13 amwaterhouseuses paintrefresher tree | commitdiff
2005-06-10 amwaterhouseremove imports tree | commitdiff
2005-06-08 amwaterhouseif missing forward slash tree | commitdiff
2005-06-08 amwaterhouseFormatted source tree | commitdiff
2005-06-08 amwaterhouseGPL license added tree | commitdiff
2005-06-02 amwaterhouseWarn if URL not found tree | commitdiff
2005-05-30 jproctermore robust parsing for DBset/DBname|id1|id2 type ids tree | commitdiff
2005-05-27 amwaterhouseignores blank lines read in and write out tree | commitdiff
2005-05-27 jprocterbetter recognition of MSF files. tree | commitdiff
2005-05-27 amwaterhouseCut and paste changes tree | commitdiff
2005-05-27 amwaterhouseC&P changes tree | commitdiff
2005-05-27 jprocterAdded nicer header formatting for MSFfile output. tree | commitdiff
2005-05-27 jprocterResponse to bug mantis?id=8187 - some quick hacks to... tree | commitdiff
2005-05-27 jprocterOld MSF Format writer now renamed. tree | commitdiff
2005-05-26 jprocterfairly pointless catch exception error information... tree | commitdiff
2005-05-25 amwaterhousec&p changed tree | commitdiff
2005-05-25 amwaterhouseuse getHexString in util tree | commitdiff
2005-05-25 jprocterdoh - compile before commit! tree | commitdiff
2005-05-25 jproctertidied up system.out messages and moved many to stderr. tree | commitdiff
2005-05-24 amwaterhousefilefilter might not be JalviewFileFilter tree | commitdiff
2005-05-24 amwaterhouseequalsIgnoreCase tree | commitdiff
2005-05-23 jprocterbug fix for wierdness retrieving QUERY sequence index. tree | commitdiff
2005-05-20 amwaterhouseFasta FASTA tree | commitdiff
2005-05-19 amwaterhousefilechooser has multiple filters tree | commitdiff
2005-05-05 jprocter<No Comment Entered> tree | commitdiff
2005-05-05 amwaterhousenew place for sequencefeaturefetcher tree | commitdiff
2005-05-03 jprocterBetter treatment of error states and cancellability... tree | commitdiff
2005-05-03 amwaterhouseformatAdapter.formats, remove redundant code tree | commitdiff
2005-05-03 amwaterhouseRemoved as obfuscation of classes wiill change class... tree | commitdiff
2005-04-14 amwaterhousecomment out jnetpropb, h and c tree | commitdiff
2005-04-14 amwaterhouseuse webservice info tree | commitdiff
2005-04-13 amwaterhouseuse AlignFrame.NEW_WINDOW_WIDTH tree | commitdiff
2005-04-11 jprocterFixed the job-failed message. tree | commitdiff
2005-04-08 amwaterhousereads fasta files from uniprot web page tree | commitdiff
2005-04-06 jprocternext version of Jpred functionality using new client... tree | commitdiff
2005-04-01 amwaterhouseignore jnetconf tree | commitdiff
2005-04-01 amwaterhouseparses jpredfile into new alignment annotation tree | commitdiff
2005-03-31 jprocterdoh - stupid jim. tree | commitdiff
2005-03-31 jprocterAdded a flag to control if the "/<seq_start>-<seq_end... tree | commitdiff
2005-03-30 jprocterFixed a sensible default leaf distance (for files where... tree | commitdiff
2005-03-23 amwaterhousereads MSF files even if PILEUP is missing tree | commitdiff
2005-03-23 amwaterhouseoverride showSaveDialog to prompt user if file exists tree | commitdiff
2005-03-22 amwaterhouseread start end if available tree | commitdiff
2005-03-21 amwaterhouseidentifies more varied blc files tree | commitdiff
2005-03-21 amwaterhouseblc file reader modified tree | commitdiff
2005-03-18 amwaterhousedelete postscript output!! tree | commitdiff
2005-03-18 jprocterTree io modifications, including support for polytomous... tree | commitdiff
2005-03-18 amwaterhouseremove unused constants tree | commitdiff
2005-03-18 amwaterhouseuse new file filter tree | commitdiff
2005-03-18 amwaterhousealign suffix updated tree | commitdiff
2005-03-18 amwaterhouseacknowledge source and modify to take filter tree | commitdiff
2005-03-18 amwaterhousenew class tree | commitdiff
2005-03-17 jprocterNewick/New Hampshire tree format parser and generator. tree | commitdiff
2005-03-17 amwaterhousetakes into account fullid display tree | commitdiff
2005-03-16 amwaterhouseuses jalviewfilechooser tree | commitdiff
2005-03-16 amwaterhouseNew class, allows sorting tree | commitdiff
2005-03-15 amwaterhouseuse the fileview tree | commitdiff
2005-03-15 amwaterhousenew class tree | commitdiff
2005-02-28 jprocterpartial implementation of JNet server prediction. tree | commitdiff
2005-02-28 jprocterfirst stab at a JPredClient. tree | commitdiff
2005-02-23 jprocterbasic jpred concise prediction reader. tree | commitdiff
2005-02-21 amwaterhouseimages moved tree | commitdiff
2005-02-10 amwaterhouseremoved tree | commitdiff
2005-02-09 amwaterhouseStart the thread tree | commitdiff
2005-02-09 amwaterhouseBlasts asynchronously tree | commitdiff
2005-02-08 amwaterhousenew class tree | commitdiff
2005-02-07 amwaterhouseNew class tree | commitdiff
2005-02-07 amwaterhouseUse Cache.getProperty tree | commitdiff
2005-02-02 amwaterhouseModified for wrapAlignement tree | commitdiff
2005-01-15 jprocterbugfix for writing fasta file without gap characters. tree | commitdiff
2005-01-14 amwaterhouseDispalys rule along top of output tree | commitdiff
2005-01-12 amwaterhousemust append file:/// at beginning of file launch tree | commitdiff
2004-12-15 amwaterhouseDisplays full id with the help of nowrap tree | commitdiff
2004-12-14 amwaterhouseHTML ouput is now identical to onscreen view tree | commitdiff
2004-12-10 amwaterhouseNow allows multi coloured HTML output tree | commitdiff
2004-12-03 amwaterhousewont work at present, renderer is null tree | commitdiff
2004-12-01 amwaterhouseModified output to reduce HTML file size tree | commitdiff
2004-11-02 amwaterhouseJalview Imported Sources start tree | commitdiff