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[jalview.git] / src / jalview / structures / models / AAStructureBindingModel.java

2022-06-09	Jim Procter	JAL-4026 ignore StructureSelectionManager events if...	blob \| commitdiff
2022-03-08	Jim Procter	JAL-3438 spotless for 2.11.2.0	blob \| commitdiff \| diff to current
2022-02-15	Jim Procter	JAL-1761 backbone type parameter for configuring which...	blob \| commitdiff \| diff to current
2022-02-15	Jim Procter	JAL-1761 need to pass molecule type when generating...	blob \| commitdiff \| diff to current
2022-02-11	Jim Procter	JAL-3949 - refactor logging from jalview.bin.Cache...	blob \| commitdiff \| diff to current
2022-02-11	Ben Soares	JAL-3949 Complete new abstracted logging framework...	blob \| commitdiff \| diff to current
2021-10-18	Jim Procter	JAL-3905 Fix: wait for response when sending mouseovers... bug/r2_11_2/JAL-3904_structureviewermenu	blob \| commitdiff \| diff to current
2021-09-21	Ben Soares	JAL-3691 automatic insertion of Locale.ROOT to toUpperC...	blob \| commitdiff \| diff to current
2021-09-14	Jim Procter	JAL-3551 - doc tweak	blob \| commitdiff \| diff to current
2021-09-02	Jim Procter	Merge branch 'develop' into features/r2_11_2/JAL-3829_3...	blob \| commitdiff \| diff to current
2021-09-02	gmungoc	JAL-3509 coerce RESNUM to hidden (really) after fetchin...	blob \| commitdiff \| diff to current
2021-08-30	Jim Procter	JAL-3674 Jmol seems to sometimes return a null for...	blob \| commitdiff \| diff to current
2021-07-27	Jim Procter	JAL-3674 Jmol seems to sometimes return a null for...	blob \| commitdiff \| diff to current
2020-06-29	gmungoc	JAL-3674 more finessed asynchronous structure commands	blob \| commitdiff \| diff to current
2020-06-26	gmungoc	JAL-3518 tidy up asynchronous structure command execution	blob \| commitdiff \| diff to current
2020-06-25	gmungoc	JAL-3518 pull up [get\|list]ResidueAttributes to Structu...	blob \| commitdiff \| diff to current
2020-06-23	gmungoc	JAL-3518 separation of ChimeraXManager, pull up of...	blob \| commitdiff \| diff to current
2020-06-23	gmungoc	JAL-3518 pull up closeViewer() and external viewer...	blob \| commitdiff \| diff to current
2020-05-29	gmungoc	JAL-3551 null pointer defence while structure files... feature/JAL-3551Pymol	blob \| commitdiff \| diff to current
2020-05-28	gmungoc	JAL-2422 correct ChimeraX save/open session commands...	blob \| commitdiff \| diff to current
2020-05-26	gmungoc	JAL-1761 pattern for structure viewer construction...	blob \| commitdiff \| diff to current
2020-05-21	gmungoc	JAL-3551 copy Jalview features to Pymol 'p' (with pull...	blob \| commitdiff \| diff to current
2020-05-15	gmungoc	JAL-3551 pull up Close Viewer dialog to base class	blob \| commitdiff \| diff to current
2020-05-12	gmungoc	JAL-3518 tidy method, remove obsolete comment	blob \| commitdiff \| diff to current
2020-04-30	gmungoc	JAL-3551 save structure viewer session refactorings...	blob \| commitdiff \| diff to current
2020-03-16	gmungoc	JAL-3551 tidying, improved commands, fix Jmol model...	blob \| commitdiff \| diff to current
2020-03-13	gmungoc	JAL-3551 working proof of concept of Jalview driving...	blob \| commitdiff \| diff to current
2020-03-03	gmungoc	JAL-3518 more pull up / test coverage of structure...	blob \| commitdiff \| diff to current
2020-02-28	gmungoc	JAL-3518 basic refactoring / pull up of superposeStruct...	blob \| commitdiff \| diff to current
2020-02-21	gmungoc	JAL-3518 more extraction of ChimeraX commands as overrides	blob \| commitdiff \| diff to current
2020-02-21	gmungoc	JAL-2422 general pull-up/removal of common or unused...	blob \| commitdiff \| diff to current
2020-02-20	gmungoc	JAL-2422 pull-up refactoring of structure commands...	blob \| commitdiff \| diff to current
2020-02-04	gmungoc	JAL-2422 pull up refactoring in preparation for Chimera...	blob \| commitdiff \| diff to current
2017-10-03	gmungoc	JAL-2738 copy to spikes/mungo	blob \| commitdiff \| diff to current
2017-08-27	Jim Procter	JAL-2691 catchall if passed dataset sequences (tests...	blob \| commitdiff \| diff to current
2017-08-27	Jim Procter	JAL-2693 TODO comments	blob \| commitdiff \| diff to current
2017-08-27	Jim Procter	JAL-2691 discover any existing chain mappings for a...	blob \| commitdiff \| diff to current
2017-08-16	Jim Procter	JAL-2418 source formatting	blob \| commitdiff \| diff to current
2017-06-09	gmungoc	JAL-2446 merged to spike branch	blob \| commitdiff \| diff to current
2017-05-29	Jim Procter	Merge branch 'features/JAL-2465_No-mapping_Jmol-structu...	blob \| commitdiff \| diff to current
2017-05-01	tcofoegbu	JAL-2465 bugfix and rerefactor renamed getPdbFile(...	blob \| commitdiff \| diff to current
2017-04-24	kiramt	JAL-2388 Hidden cols separated from column selection...	blob \| commitdiff \| diff to current
2017-03-21	gmungoc	JAL-2243 update discovered features on opening structur...	blob \| commitdiff \| diff to current
2017-03-13	gmungoc	JAL-2438 FeatureColourFinder refactored from FeatureRen...	blob \| commitdiff \| diff to current
2017-03-08	gmungoc	JAL-2430 colour columns hidden in alignment gray on...	blob \| commitdiff \| diff to current
2017-03-07	gmungoc	JAL-2295 status messages for Chimera attributes set...	blob \| commitdiff \| diff to current
2016-12-22	gmungoc	JAL-2360 structure viewers now using ColourMenuHelper...	blob \| commitdiff \| diff to current
2016-11-30	Jim Procter	Merge branch 'features/JAL-2320_closeChimeraAction...	blob \| commitdiff \| diff to current
2016-11-25	gmungoc	Merge branch 'develop' into trialMerge	blob \| commitdiff \| diff to current
2016-11-10	tcofoegbu	Bugfix to enable accurate chain extraction/association...	blob \| commitdiff \| diff to current
2016-11-10	gmungoc	JAL-2320 added getViewer() method to return Chimera...	blob \| commitdiff \| diff to current
2016-10-25	Jim Procter	JAL-2089 patch broken merge to master for Release 2... releases/Release_2_10_0_Branch	blob \| commitdiff \| diff to current
2016-10-24	Jim Procter	Merge branch 'releases/Release_2_10_0_Branch'	blob \| commitdiff \| diff to current
2016-10-14	gmungoc	Merge branch 'releases/Release_2_10_Branch' into task... task/JAL-2196pdbeProperties	blob \| commitdiff \| diff to current
2016-10-13	gmungoc	JAL-2044 ensure AAStructureBindingModel.pdbEntry has...	blob \| commitdiff \| diff to current
2016-10-06	Jim Procter	JAL-2089 Merge branch releases/Release_2_10_Branch...	blob \| commitdiff \| diff to current
2016-09-13	gmungoc	JAL-2196 refactor PDBEntry.getProperty,setProperty...	blob \| commitdiff \| diff to current
2016-07-11	gmungoc	file format enum wip changes	blob \| commitdiff \| diff to current
2016-06-02	tcofoegbu	JAL-2020 fix for Jmol choking jalview while loading...	blob \| commitdiff \| diff to current
2016-03-24	gmungoc	JAL-2032 structure follow mouseover in a copy of a...	blob \| commitdiff \| diff to current
2015-10-16	Jim Procter	JAL-1925 update source version in license Release_2_9_0b2	blob \| commitdiff \| diff to current
2015-10-08	Jim Procter	JAL-1894 update year/version in copyright	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 licencing for new files in src	blob \| commitdiff \| diff to current
2015-09-10	Jim Procter	JAL-1645 source formatting and organise imports	blob \| commitdiff \| diff to current
2015-08-19	gmungoc	JAL-1742 suppress 'add chain' option for Jmol, pull...	blob \| commitdiff \| diff to current
2015-06-05	gmungoc	JAL-1752 structure highlight scoped to only its mapped...	blob \| commitdiff \| diff to current
2015-06-05	gmungoc	JAL-1622 fix bug computing superposition + associated...	blob \| commitdiff \| diff to current
2015-06-04	gmungoc	JAL-1750 View Mapping scoped to that viewer's mappings...	blob \| commitdiff \| diff to current
2015-06-04	gmungoc	JAL-1742 don't offer to align another chain to the...	blob \| commitdiff \| diff to current
2015-05-20	gmungoc	JAL-1741 nucleotide-aware colour schemes applied to...	blob \| commitdiff \| diff to current
2015-03-26	gmungoc	Merge develop to Release_2_8_3_Branch	blob \| commitdiff \| diff to current
2015-01-08	gmungoc	JAL-1588 part work save/restore of Chimera session	blob \| commitdiff \| diff to current
2015-01-06	gmungoc	JAL-1588 refactoring prior to 'save Chimera project'	blob \| commitdiff \| diff to current

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