git://source.jalview.org / jalview.git / history
? search:
summary | shortlog | log | commit | commitdiff | tree
first ⋅ prev ⋅ next
JAL-6386 update slivka client for j2s compatibility
[jalview.git] / src / jalview / util /
2019-08-13 Jim ProcterMerge branch 'alpha/JAL-3362_Jalview_212_alpha' into... tree | commitdiff
2019-07-10 gmungocMerge branch 'develop' into feature/JAL-3187linkedFeatures tree | commitdiff
2019-07-10 Jim ProcterMerge branch 'merge/JAL-3285_mchmmer_with_211_develop... tree | commitdiff
2019-06-18 Ben SoaresJAL-3312 Fixed SHIFT-CMD/SHIFT-CTRL Key combinations... tree | commitdiff
2019-06-12 Ben SoaresJAL-3295 Fixed CMD-select of sequences in alignment... tree | commitdiff
2019-06-11 gmungocJAL-3187 CDS has same dataset sequence as transcript tree | commitdiff
2019-06-04 Jim ProcterMerge branch 'develop' into developtomchmmer tree | commitdiff
2019-05-02 gmungocJAL-3244 renamed Platform method for clarity bug/JAL-3244jmolWindows tree | commitdiff
2019-05-01 gmungocJAL-3244 ignore file path separator when comparing... tree | commitdiff
2019-04-30 gmungocJAL-3241 simplified enum constructors for classloadabil... tree | commitdiff
2019-04-15 Ben SoaresJAL-3130 Helper classes to take Class Exceptions when... tree | commitdiff
2019-04-11 Jim ProcterMerge branch 'develop' into task/JAL-3130_Java_11_inves... tree | commitdiff
2019-03-28 gmungocMerge branch 'feature/JAL-3181linkOrdering' into develop tree | commitdiff
2019-03-20 Ben SoaresJAL-3130 Lots of deprecation fixes. See utils/deprecat... tree | commitdiff
2019-03-19 Ben SoaresJAL-3130 Merge of JAL-3130_Java_11_investigations-Ben... tree | commitdiff
2019-03-04 gmungocMerge remote-tracking branch 'origin/tasks/JAL-3035_rem... tree | commitdiff
2019-01-04 gmungocJAL-3181 simplified code and test tree | commitdiff
2019-01-03 gmungocJAL-3181 order link menu items tree | commitdiff
2018-12-13 Ben SoaresJAL-3130 Use non-deprecated check for Mac CMD key press tree | commitdiff
2018-10-25 gmungocJAL-3143 comma-delimited feature attributes for alleles, tree | commitdiff
2018-09-18 Jim ProcterJAL-3035 more dedasification tree | commitdiff
2018-07-18 Jim ProcterMerge branch 'features/mchmmer' into features/mchmmer_m... features/mchmmer_merge_JAL-1950 tree | commitdiff
2018-06-05 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-06-04 gmungocJAL-3019 correctly form toRange of 'traversed' MapList tree | commitdiff
2018-05-31 Jim ProcterMerge branch 'spike/JAL-1950_hmmer3client' into feature... tree | commitdiff
2018-05-31 Jim ProcterMerge branch 'develop' into spike/JAL-1950_hmmer3client tree | commitdiff
2018-05-29 Mungo CarstairsJAL-2994 utility method to match a list of folder/file... tree | commitdiff
2018-05-28 gmungocJAL-2994 use pattern matches to search for chimera.exe tree | commitdiff
2018-05-14 gmungocJAL-2711 removed unused and flaky utility method tree | commitdiff
2018-05-08 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-05-07 gmungocMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-05-04 gmungocJAL-2965 graduate brightness on z-axis from centre... tree | commitdiff
2018-04-30 gmungocJAL-2965 graduated sequence point colour from back... tree | commitdiff
2018-04-17 Mungo CarstairsJAL-2937 working Cygwin bash execution of hmmbuild... tree | commitdiff
2018-04-12 gmungocJAL-2223 don't add duplicate mappings to StructureSelec... tree | commitdiff
2018-04-09 Mungo CarstairsJAL-2937 Cygwin path preference, method refactoring tree | commitdiff
2018-04-09 Mungo CarstairsJAL-2937 extract reusable utility method tree | commitdiff
2018-03-30 gmungocJAL-2599 MapList from HMM nodes to consensus dataset... tree | commitdiff
2018-03-30 gmungocJAL-2599 move utility method to MappingUtils tree | commitdiff
2018-03-16 gmungocMerge branch 'develop' into trialMerge tree | commitdiff
2018-03-07 Jim ProcterMerge branch 'releases/Release_2_10_4_Branch' into... tree | commitdiff
2018-02-20 gmungocMerge branch 'develop' into features/mchmmer tree | commitdiff
2018-02-06 kiramtMerge branch 'develop' into feature/JAL-2759 feature/JAL-2759 tree | commitdiff
2018-01-10 gmungocJAL-1793 update spike branch to latest tree | commitdiff
2017-12-08 gmungocJAL-2843 toStableString, fromString for Jalview feature... tree | commitdiff
2017-12-04 gmungocJAL-2808 JAL-2850 update spike build to latest tree | commitdiff
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term... tree | commitdiff
2017-11-28 gmungocJAL-2850 MapList.isToForwardStrand added tree | commitdiff
2017-11-24 gmungocJAL-2808 update spike to latest tree | commitdiff
2017-11-24 gmungocJAL-2808 refine FeatureMatcher interface and matcher... tree | commitdiff
2017-11-24 gmungocJAL-2808 don't cache i18n - MessageManager already... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range tooltip... tree | commitdiff
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with... tree | commitdiff
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present... tree | commitdiff
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options tree | commitdiff
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings) tree | commitdiff
2017-11-22 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-17 Jim ProcterJAL-2698 source code licencing tree | commitdiff
2017-11-15 gmungocJAL-2835 spike updated with latest tree | commitdiff
2017-11-15 gmungocJAL- 2835 support filter on nested attribute keys tree | commitdiff
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759 tree | commitdiff
2017-11-07 gmungocJAL-2069 update spike branch with latest tree | commitdiff
2017-11-07 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-11-07 gmungocJAL-2808 tweak to use Iterable for set of matchers tree | commitdiff
2017-11-06 gmungocJAL-2069 cache colours generated from labels tree | commitdiff
2017-11-06 gmungocJAL-2808 small tweak to getString to quote the pattern... tree | commitdiff
2017-11-02 gmungocJAL-2808 spike updated with latest tree | commitdiff
2017-11-02 gmungocJAL-2808 toString modified, tests corrected tree | commitdiff
2017-10-31 gmungocJAL-2808 revised util.matcher package, 2 filter conditi... tree | commitdiff
2017-10-31 kiramtJAL-2756 update for new EBI https link tree | commitdiff
2017-10-30 gmungocJAL-2808 classes to support filtering by attribute... tree | commitdiff
2017-10-27 gmungocJAL-1793 spike branch updated to latest tree | commitdiff
2017-10-26 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-10-26 gmungocJAL-2792 html table for Feature Details report tree | commitdiff
2017-10-25 Jim ProcterMerge branch 'bug/JAL-2617mappedStopCodon' into develop tree | commitdiff
2017-10-05 gmungocJAL-2738 update spikes/mungo tree | commitdiff
2017-10-05 gmungocJAL-2738 helper method for convolving mappings tree | commitdiff
2017-10-05 gmungocJAL-2738 method to compound / traverse / convolve two... tree | commitdiff
2017-10-03 gmungocJAL-2738 copy to spikes/mungo tree | commitdiff
2017-10-02 gmungocMerge branch 'develop' into features/JAL-1793VCF tree | commitdiff
2017-09-29 Jim ProcterJAL-2745 update default EBI-eye search URL to HTTPS tree | commitdiff
2017-09-29 Jim ProcterJAL-2745 update default EBI-eye search URL to HTTPS feature/JAL-2745ebiHttps tree | commitdiff
2017-09-27 kiramtJAL-2674 Removing most calls to getHiddenColumnsCopy tree | commitdiff
2017-09-22 gmungocJAL-2738 extract utility method to MappingUtils tree | commitdiff
2017-09-15 Jim ProcterJAL-1625 ensure we don’t regress on JAL-20 - we always... patch/JAL-2732 tree | commitdiff
2017-09-15 Jim ProcterJAL-1625 javadoc tree | commitdiff
2017-09-01 gmungocJAL-2617 omit stop codon from synthesized CDS sequence tree | commitdiff
2017-08-30 TZVanaaltenJAL-2616 HMM-Family alignments can now be filtered... tree | commitdiff
2017-08-21 Jim ProcterMerge branch 'develop' into trial_merge/JAL-1950 spike/JAL-1950_hmmer3client tree | commitdiff
2017-08-21 gmungocMerge branch 'develop' into features/JAL-2446NCList features/JAL-2446NCList tree | commitdiff
2017-08-18 TZVanaaltenMerge branch 'develop' into features/hmmer tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 add GPL to main sources tree | commitdiff
2017-08-16 Jim ProcterJAL-2418 source formatting tree | commitdiff
2017-08-16 TZVanaaltenJAL-2599 fix background frequency storage and correct... tree | commitdiff
2017-08-08 TZVanaaltenJAL-2616 fix allowing clan sorting to work tree | commitdiff
2017-07-31 TZVanaaltenJAL-2629 add hmmalign command tree | commitdiff
2017-07-25 TZVanaaltenJAL-2616 add ability to perform random alignments withi... tree | commitdiff
2017-07-24 tzvanaaltenJAL-2616 add ability to change location of family and... tree | commitdiff
2017-07-24 gmungocspike branch updated from latest features/JAL-2446 tree | commitdiff
2017-07-21 TZVanaaltenJAL-2616 add ability to sort Pfam families and HMMs... tree | commitdiff
next