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Merge branch 'releases/Release_2_11_4_Branch'
[jalview.git]
/
src
/
jalview
/ viewmodel
2018-09-27
gmungoc
JAL-2791 method that tests all conditions for feature...
commit
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commitdiff
2018-09-10
gmungoc
JAL-3099 use Alignment.getVisibleWidth() where wanted
bug/JAL-3099alignmentVisibleWidth
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commitdiff
2018-07-20
gmungoc
JAL-3048 revised AlignExportSettings dialog with respon...
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commitdiff
2018-07-09
gmungoc
JAL-3060 extract FeatureEditor class
task/JAL-3060featureEditor
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commitdiff
2018-05-07
gmungoc
JAL-1767 JAL-2647 hide 'Input Data..' for PCA loaded...
commit
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commitdiff
2018-05-04
gmungoc
JAL-1767 refactorings to enable faithful restore of...
commit
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commitdiff
2018-04-27
gmungoc
JAL-1767 refactoring and tidying of RotatableCanvas...
commit
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commitdiff
2018-04-26
gmungoc
JAL-2962 rename run method (as not a Runnable)
commit
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commitdiff
2018-04-26
gmungoc
JAL-2962 code tidying/documentation (non-functional...
commit
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commitdiff
2018-04-25
gmungoc
JAL-1767 minor field tidying prior to functional changes
commit
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commitdiff
2018-04-18
gmungoc
Merge branch 'releases/Release_2_10_4_Branch' into...
commit
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commitdiff
2018-04-18
gmungoc
JAL-2593 render 'duplicate' features if transparency...
commit
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commitdiff
2018-03-07
Jim Procter
Merge branch 'releases/Release_2_10_4_Branch' into...
commit
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commitdiff
2018-02-27
Jim Procter
Merge branch 'feature/JAL-2759' into merge/JAL-2759_2104
commit
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commitdiff
2018-02-22
Jim Procter
Merge branch 'bug/JAL-2666' into releases/Release_2_10_...
commit
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commitdiff
2018-02-21
Jim Procter
Merge branch 'bug/JAL-2778again' into releases/Release_...
commit
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commitdiff
2018-02-09
gmungoc
JAL-2666 fix failure to scroll split alignment of height 1
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commitdiff
2018-02-06
kiramt
Merge branch 'develop' into feature/JAL-2759
feature/JAL-2759
commit
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commitdiff
2018-01-26
kiramt
JAL-2778 tightened up use of resetAlignmentDims
commit
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commitdiff
2018-01-19
kiramt
JAL-2759 Changes to getVisibleSequenceStrings after...
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commitdiff
2018-01-18
kiramt
JAL-2759 change subtractVisibleColumns and removal...
commit
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commitdiff
2018-01-16
kiramt
JAL-2759 Moved alignment annotation code out of HiddenC...
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commitdiff
2018-01-15
kiramt
JAL-2759 Changed VisibleColsCollection constructor...
commit
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commitdiff
2018-01-15
kiramt
JAL-2759 Rename findColumnPosition and adjustForHiddenC...
commit
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commitdiff
2018-01-10
gmungoc
JAL-1793 update spike branch to latest
commit
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commitdiff
2018-01-10
gmungoc
JAL-2791 ignore feature type visibility in getColor()
commit
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commitdiff
2017-12-08
gmungoc
JAL-2843 FeatureRenderer.getFeatureFilters returns...
commit
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commitdiff
2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range tooltip...
commit
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commitdiff
2017-11-23
gmungoc
JAL-2808 refactor KeyedMatcher as FeatureMatcher with...
commit
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commitdiff
2017-11-23
gmungoc
JAL-2808 update spike to latest (filter range, Present...
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commitdiff
2017-11-23
gmungoc
JAL-2808 pass FeatureSettings to controller as array...
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commitdiff
2017-11-22
gmungoc
JAL-2069 spike updated with latest (FeatureTypeSettings)
commit
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commitdiff
2017-11-22
gmungoc
Merge branch 'develop' into features/JAL-1793VCF
commit
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commitdiff
2017-11-22
gmungoc
JAL-2808 JAL-2069 FeatureTypeSettings (with new Filters...
commit
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commitdiff
2017-11-17
kiramt
Merge branch 'develop' into bug/JAL-2837
bug/JAL-2837
commit
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commitdiff
2017-11-15
gmungoc
JAL-2816 exclude filtered / thresholded out features...
commit
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commitdiff
2017-11-15
kiramt
JAL-2840 fix wrapped scrolling when using cursor at...
commit
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commitdiff
2017-11-15
gmungoc
JAL-2835 spike updated with latest
commit
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commitdiff
2017-11-15
gmungoc
JAL-2835 code tidy (generic type constructors)
commit
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commitdiff
2017-11-14
kiramt
JAL-2831 tidies and tests
commit
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commitdiff
2017-11-14
kiramt
JAL-2831 tidy
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commitdiff
2017-11-14
kiramt
JAL-2831 Attempt at cursor fix for wrapped mode
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commitdiff
2017-11-14
kiramt
JAL-2831 deal with hidden cols and seqs in new cursor...
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commitdiff
2017-11-14
kiramt
JAL-2831 Added move viewport event and set up cursor...
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commitdiff
2017-11-07
kiramt
JAL-2774 Added javadoc for new event parameters
imp/JAL-2774
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commitdiff
2017-11-07
gmungoc
JAL-2069 update spike branch with latest
commit
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commitdiff
2017-11-07
gmungoc
JAL-2069 add 'by attribute' options to graduated featur...
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commitdiff
2017-11-07
gmungoc
JAL-2816 tweaks to feature visibility checks
commit
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commitdiff
2017-11-03
kiramt
JAL-2778 Reduced calculation load for overview box
commit
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commitdiff
2017-11-02
gmungoc
JAL-2808 spike updated with latest
commit
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commitdiff
2017-11-02
gmungoc
JAL-2808 feature filters held on FeatureRenderer, getCo...
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commitdiff
2017-10-31
kiramt
Merge remote-tracking branch 'origin/develop' into...
commit
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commitdiff
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
commit
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commitdiff
2017-10-26
Jim Procter
JAL-2488 patch causes of NPE during testStoreAndRecover...
commit
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2667mouseWheelWrapped' into develop
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2727closeAllFreeMemory' into...
commit
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
commit
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commitdiff
2017-10-13
kiramt
JAL-2774 Created single event for update to both start...
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commitdiff
2017-10-11
kiramt
JAL-2742 removed unused getViewAsCigars
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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commitdiff
2017-09-14
gmungoc
JAL-2727 null more fields in AlignmentViewport.dispose...
commit
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commitdiff
2017-09-13
gmungoc
JAL-2727 null additional references on close
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commitdiff
2017-09-12
gmungoc
Revert "JAL-2727 null hconsensus, "
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commitdiff
2017-09-12
gmungoc
JAL-2727 null hconsensus,
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commitdiff
2017-09-12
gmungoc
JAL-2727 ensure ViewportRanges (and gapcounts) are...
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commitdiff
2017-08-23
gmungoc
JAL-2667 tests added, update status bar and tooltip
commit
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
commit
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commitdiff
2017-08-16
Jim Procter
JAL-2418 add GPL to main sources
commit
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
commit
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commitdiff
2017-08-10
gmungoc
JAL-2593 don't filter out 'colour by label' features
commit
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commitdiff
2017-08-09
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-08-08
gmungoc
JAL-2560 alternative fix (reinstate lost line of code)
commit
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commitdiff
2017-08-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-08-08
gmungoc
JAL-2649 JAL-2650 wait for Conservation calc to complet...
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commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-08-01
gmungoc
JAL-2611 reinstate missed merge - again!
commit
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commitdiff
2017-08-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-08-01
gmungoc
Merge branch 'feature/JAL-2611' into develop
commit
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commitdiff
2017-07-24
gmungoc
spike branch updated from latest features/JAL-2446
commit
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commitdiff
2017-07-23
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-07-22
gmungoc
JAL-2624 check feature colour threshold when colouring...
commit
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commitdiff
2017-07-22
kiramt
Merge branch 'develop' into feature/JAL-2611
commit
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commitdiff
2017-07-19
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
commit
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commitdiff
2017-07-18
kiramt
JAL-2611 Tidies, initial unit tests
commit
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commitdiff
2017-07-18
gmungoc
JAL-147 corrected calculation of vertical scroll positi...
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commitdiff
2017-07-18
kiramt
JAL-2611 Better
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commitdiff
2017-07-17
kiramt
JAL-2611 Still not happy with behaviour
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commitdiff
2017-07-14
kiramt
JAL-2611 First pass, not thrilled with hidden column...
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commitdiff
2017-07-14
kiramt
Merge branch 'feature/JAL-2613' into feature/JAL-2611
commit
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commitdiff
2017-07-14
kiramt
JAL-2611 Pre-merge checkin
commit
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commitdiff
2017-07-13
kiramt
JAL-2611 Added overview dimensions test for position...
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commitdiff
2017-07-13
kiramt
JAL-2613 Unit tests and a fix. Phew.
commit
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commitdiff
2017-07-12
kiramt
JAL-2613 Centre alignment at click point
commit
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commitdiff
2017-07-06
gmungoc
JAL-1858 scrollToWrappedVisible preserve any horizontal...
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commitdiff
2017-07-06
gmungoc
JAL-147 prevent vertical Overview box movement in wrapp...
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commitdiff
2017-07-06
gmungoc
JAL-147 unit test for hide/show sequences update Viewpo...
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commitdiff
2017-07-05
Jim Procter
Merge branch 'develop' into features/JAL-2349_matrixvis
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commitdiff
2017-07-05
gmungoc
JAL-147 prevent overview box move up over hidden first...
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commitdiff
2017-07-04
gmungoc
JAL-147 revised update of startSeq, endSeq on unhide...
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commitdiff
2017-07-04
gmungoc
JAL-147 unit tests added, unused setEndRes removed
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