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JAL-3541 removed clover report generation debug flag (utf-8 encoding enforcement...
[jalview.git] / src / jalview / ws / jws2 /
2014-04-21 Jim Procterpatch for JAL-1465 - set min/max thresholds for each... tree | commitdiff
2014-02-21 Jim Procterpatch for JAL-1449 - continuance of JAL-1364 - check... tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1... tree | commitdiff
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge tree | commitdiff
2014-01-29 Jim ProcterJAL-1432 updated copyright notices tree | commitdiff
2013-12-25 darolmarJAL-1355 (basic i18n support) tree | commitdiff
2013-10-11 Jim ProcterMerge branch 'JAL-1164_disorderforselection' into Relea... tree | commitdiff
2013-10-11 Jim ProcterJAL-1164 scope bySequence analysis methods to start... tree | commitdiff
2013-10-11 Jim ProcterJAL-1164 only predict on currently selected sequences... tree | commitdiff
2013-10-05 Jim ProcterJAL-1379 JAL-1378 exclusion list property to ignore... tree | commitdiff
2013-10-05 Jim ProcterJAL-1378 hack to place 'Predictors' into Secondary... tree | commitdiff
2013-10-05 Jim ProcterJAL-1364 use gapMap to map RNAalifold annotation onto... tree | commitdiff
2013-10-05 Jim ProcterJAL-1379 JAL-1358 only enable/disable menu entries... tree | commitdiff
2013-10-04 Jim ProcterJAL-1378 JWS-71 update to from-source build of JABA... tree | commitdiff
2013-09-25 Jim ProcterJAL-1365 unified GUI building for AACon and RNAAliFold... tree | commitdiff
2013-09-25 Jim ProcterJAL-1365 use AlignAnalysisUIText class to provide metad... tree | commitdiff
2013-09-25 Jim ProcterJAL-1365 refactored core methods from RNAAliFold and... tree | commitdiff
2013-09-20 Jim Procterformatting tree | commitdiff
2013-09-03 Jim ProcterMerge branch 'JAL-1373_precision' into RNAalifold tree | commitdiff
2013-08-30 Daniel BartonColour be RNA helices bug fixed tree | commitdiff
2013-08-30 Daniel BartonJAL-1358 Cleaned up RNAalifoldClient.java. RNA helices... tree | commitdiff
2013-08-28 Daniel BartonRNAalifoldClient updated to be more like AAConClient... tree | commitdiff
2013-08-27 Daniel BartonJAL-1358 jalview displays some RNA struture annotation... tree | commitdiff
2013-08-27 Jim ProcterJAL-1359 simpler logic for deciding if all threads... tree | commitdiff
2013-08-27 Daniel BartonJAL-1358 RNAStructExportImport test file mirrors Disord... tree | commitdiff
2013-08-27 Daniel BartonJAL-1358 Just the eclipse project/classpath files so... tree | commitdiff
2013-06-18 Jim ProcterJAL-1320 ascending alphabetical order tree | commitdiff
2013-06-18 Jim ProcterJAL-1320 sort options and parameters according to their... tree | commitdiff
2013-06-18 Jim Proctertypo tree | commitdiff
2013-06-17 Jim ProcterJAL-1319 (blacklist fix) check for presence of a score... tree | commitdiff
2013-05-24 Jim Proctertypo tree | commitdiff
2012-12-11 jprocterJAL-1217 check and avoid NPE if no datastore object... tree | commitdiff
2012-12-11 jprocterJAL-1217 report exception for service when no datastore... tree | commitdiff
2012-11-08 jproctertidy imports tree | commitdiff
2012-10-22 jprocterJalview 2.8 Source Header tree | commitdiff
2012-10-03 jprocterformatting tree | commitdiff
2012-09-21 jprocterJAL-849 try harder and wait for longer for JABAWS to... tree | commitdiff
2012-09-21 jprocterJAL-1171 refactor code to allow gui update for global... tree | commitdiff
2012-09-21 jprocterJAL-1165 visual delay whilst results are processed. tree | commitdiff
2012-09-05 jprocterformatting tree | commitdiff
2012-09-05 jprocterpatch for NPE when no services are available to resolve... tree | commitdiff
2012-09-05 jprocterJAL-975 null any existing preset if user has supplied... tree | commitdiff
2012-09-05 jprocterJAL-976 fix AACon name typo in source and GUI tree | commitdiff
2012-09-04 jprocteroff by one for sequence associated annotation tree | commitdiff
2012-09-04 jprocterunused variable tree | commitdiff
2012-09-04 jprocterJAL-974 JRonn thresholds tree | commitdiff
2012-09-03 jprocterJAL-975 JAL-974 JAL-976 always adjust height after... tree | commitdiff
2012-09-03 jprocterJAL-974 show thresholds for disorder predictor annotati... tree | commitdiff
2012-08-31 jprocterJAL-974 - ensure annotation created in local sequence... tree | commitdiff
2012-08-29 jprocterJAL-974 skip empty rows tree | commitdiff
2012-08-29 jprocterJAL-974 set GlobPlot raw/smooth score annotation rows... tree | commitdiff
2012-08-29 jprocterJAL-1153 new runtime property set to first non-null... tree | commitdiff
2012-08-28 jprocterremove contaminant imports tree | commitdiff
2012-08-28 jprocterJAL-676 JAL-1001 - simple menu item to access documenta... tree | commitdiff
2012-08-28 jprocterformatting tree | commitdiff
2012-08-28 jprocterformatting tree | commitdiff
2012-08-28 jprocterJAL-974 create mixture of sequence features marking... tree | commitdiff
2012-08-28 jprocterJAL-974 refactored creation of Annotation rows from... tree | commitdiff
2012-08-28 jprocterJAL-974 JAL-975 try to cope with temporary server error... tree | commitdiff
2012-08-28 jprocterJAL-1001 - hack to extract the global URL for a service... tree | commitdiff
2012-08-14 Anne Menardlast version stay many bugs .. tree | commitdiff
2012-08-07 jprocterJAL-1137 clean up old-style menu code and look tree | commitdiff
2012-08-07 jprocterJAL-1137 JAL-975 simpler menu for the AACon service... tree | commitdiff
2012-08-07 jprocterJAL-975 JAL-1137 debug messages for web service client... tree | commitdiff
2012-08-03 jprocterJAL-1136 allow parameter sets to be transferred across... tree | commitdiff
2012-08-03 jprocterJAL-1136 less code-dependent formula for creating serve... tree | commitdiff
2012-08-03 jprocterJAL-1136 - fix abstraction for parameter container... tree | commitdiff
2012-08-02 jprocterJAL-976 better logging/error reporting for disorder... tree | commitdiff
2012-08-01 jprocterJAL-976 don't clear menu out before adding jabaws servi... tree | commitdiff
2012-07-08 jprocterJAL-976 clean out associated annotation tree | commitdiff
2012-07-08 jprocterJAL-976 implement additional calcId method tree | commitdiff
2012-07-08 jprocterJAL-976 simpler parameter update model tree | commitdiff
2012-07-08 jprocterJAL-961 JAL-976 allow access to service URI for paramet... tree | commitdiff
2012-07-08 jprocterJAL-961 JAL-976 recover current settings from associate... tree | commitdiff
2012-07-08 jprocterJAL-976 pick an available instance of a service based... tree | commitdiff
2012-07-08 jprocterbugfix - use currently held parameters tree | commitdiff
2012-07-08 jprocterJAL-976 - storing service parameters on the view model tree | commitdiff
2012-07-06 jprocterJAL-976 test if the sliders have been modified from... tree | commitdiff
2012-07-06 jprocterunique URI for service type tree | commitdiff
2012-07-06 jprocterJAL-961 JAL-976 abstracted container for dynamic calcul... tree | commitdiff
2012-07-05 Anne MenardAdd support RNAML format tree | commitdiff
2012-07-03 jprocterJAL-961 allow calcId to be specified independently... tree | commitdiff
2012-07-02 jprocterJAL-974 create graduated feature colours for annotation... tree | commitdiff
2012-06-20 jprocterformatting tree | commitdiff
2012-06-19 jprocterJAL-976 JAL-975 JAL-1119 - pass on any existing paramet... tree | commitdiff
2012-06-19 jprocterJAL-975 JAL-1119 - prototype adjustable AACons paramete... tree | commitdiff
2012-06-19 jprocterJAL-975 - doh! valid result if width matches *ungapped... tree | commitdiff
2012-06-19 jprocterJAL-975 - bespoke AACons settings object to save curren... tree | commitdiff
2012-06-19 jprocterJAL-975 - ensure we only submit ungapped, padded alignm... tree | commitdiff
2012-06-14 jprocterJAL-975 JAL-1002 ensure custom parameters are actually... tree | commitdiff
2012-06-14 jprocterJAL-976 - make sure annotation panel is updated to... tree | commitdiff
2012-06-14 jprocterJAL-961 JAL-976 kill any existing AACon job if a new... tree | commitdiff
2012-06-14 jprocterJAL-1003 visual delay when running a sequence or alignm... tree | commitdiff
2012-06-14 jprocterJAL-961 JAL-976 tweaked way that AACons client is regis... tree | commitdiff
2012-06-14 jprocterformatting tree | commitdiff
2012-06-14 jprocterformatting tree | commitdiff
2012-06-07 jprocterJAL-976 ensure job id gets written out if there's an... tree | commitdiff
2012-06-04 jprocterjavatidy tree | commitdiff
2012-05-23 jprocterTODO for JAL-976 tree | commitdiff
2012-05-23 jprocterJAL-961 - annotatable datamodel objects can be queried... tree | commitdiff
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