JAL-3541 removed clover report generation debug flag (utf-8 encoding enforcement...
[jalview.git] / src / jalview / ws / jws2 /
2014-04-21 Jim Procterpatch for JAL-1465 - set min/max thresholds for each...
2014-02-21 Jim Procterpatch for JAL-1449 - continuance of JAL-1364 - check...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_1_Branch_i18n' into try_r20b1...
2014-02-03 Jim ProcterMerge branch 'Release_2_8_0b1_Branch' into try_r20b1_merge
2014-01-29 Jim ProcterJAL-1432 updated copyright notices
2013-12-25 darolmarJAL-1355 (basic i18n support)
2013-10-11 Jim ProcterMerge branch 'JAL-1164_disorderforselection' into Relea...
2013-10-11 Jim ProcterJAL-1164 scope bySequence analysis methods to start...
2013-10-11 Jim ProcterJAL-1164 only predict on currently selected sequences...
2013-10-05 Jim ProcterJAL-1379 JAL-1378 exclusion list property to ignore...
2013-10-05 Jim ProcterJAL-1378 hack to place 'Predictors' into Secondary...
2013-10-05 Jim ProcterJAL-1364 use gapMap to map RNAalifold annotation onto...
2013-10-05 Jim ProcterJAL-1379 JAL-1358 only enable/disable menu entries...
2013-10-04 Jim ProcterJAL-1378 JWS-71 update to from-source build of JABA...
2013-09-25 Jim ProcterJAL-1365 unified GUI building for AACon and RNAAliFold...
2013-09-25 Jim ProcterJAL-1365 use AlignAnalysisUIText class to provide metad...
2013-09-25 Jim ProcterJAL-1365 refactored core methods from RNAAliFold and...
2013-09-20 Jim Procterformatting
2013-09-03 Jim ProcterMerge branch 'JAL-1373_precision' into RNAalifold
2013-08-30 Daniel BartonColour be RNA helices bug fixed
2013-08-30 Daniel BartonJAL-1358 Cleaned up RNAalifoldClient.java. RNA helices...
2013-08-28 Daniel BartonRNAalifoldClient updated to be more like AAConClient...
2013-08-27 Daniel BartonJAL-1358 jalview displays some RNA struture annotation...
2013-08-27 Jim ProcterJAL-1359 simpler logic for deciding if all threads...
2013-08-27 Daniel BartonJAL-1358 RNAStructExportImport test file mirrors Disord...
2013-08-27 Daniel BartonJAL-1358 Just the eclipse project/classpath files so...
2013-06-18 Jim ProcterJAL-1320 ascending alphabetical order
2013-06-18 Jim ProcterJAL-1320 sort options and parameters according to their...
2013-06-18 Jim Proctertypo
2013-06-17 Jim ProcterJAL-1319 (blacklist fix) check for presence of a score...
2013-05-24 Jim Proctertypo
2012-12-11 jprocterJAL-1217 check and avoid NPE if no datastore object...
2012-12-11 jprocterJAL-1217 report exception for service when no datastore...
2012-11-08 jproctertidy imports
2012-10-22 jprocterJalview 2.8 Source Header
2012-10-03 jprocterformatting
2012-09-21 jprocterJAL-849 try harder and wait for longer for JABAWS to...
2012-09-21 jprocterJAL-1171 refactor code to allow gui update for global...
2012-09-21 jprocterJAL-1165 visual delay whilst results are processed.
2012-09-05 jprocterformatting
2012-09-05 jprocterpatch for NPE when no services are available to resolve...
2012-09-05 jprocterJAL-975 null any existing preset if user has supplied...
2012-09-05 jprocterJAL-976 fix AACon name typo in source and GUI
2012-09-04 jprocteroff by one for sequence associated annotation
2012-09-04 jprocterunused variable
2012-09-04 jprocterJAL-974 JRonn thresholds
2012-09-03 jprocterJAL-975 JAL-974 JAL-976 always adjust height after...
2012-09-03 jprocterJAL-974 show thresholds for disorder predictor annotati...
2012-08-31 jprocterJAL-974 - ensure annotation created in local sequence...
2012-08-29 jprocterJAL-974 skip empty rows
2012-08-29 jprocterJAL-974 set GlobPlot raw/smooth score annotation rows...
2012-08-29 jprocterJAL-1153 new runtime property set to first non-null...
2012-08-28 jprocterremove contaminant imports
2012-08-28 jprocterJAL-676 JAL-1001 - simple menu item to access documenta...
2012-08-28 jprocterformatting
2012-08-28 jprocterformatting
2012-08-28 jprocterJAL-974 create mixture of sequence features marking...
2012-08-28 jprocterJAL-974 refactored creation of Annotation rows from...
2012-08-28 jprocterJAL-974 JAL-975 try to cope with temporary server error...
2012-08-28 jprocterJAL-1001 - hack to extract the global URL for a service...
2012-08-14 Anne Menardlast version stay many bugs ..
2012-08-07 jprocterJAL-1137 clean up old-style menu code and look
2012-08-07 jprocterJAL-1137 JAL-975 simpler menu for the AACon service...
2012-08-07 jprocterJAL-975 JAL-1137 debug messages for web service client...
2012-08-03 jprocterJAL-1136 allow parameter sets to be transferred across...
2012-08-03 jprocterJAL-1136 less code-dependent formula for creating serve...
2012-08-03 jprocterJAL-1136 - fix abstraction for parameter container...
2012-08-02 jprocterJAL-976 better logging/error reporting for disorder...
2012-08-01 jprocterJAL-976 don't clear menu out before adding jabaws servi...
2012-07-08 jprocterJAL-976 clean out associated annotation
2012-07-08 jprocterJAL-976 implement additional calcId method
2012-07-08 jprocterJAL-976 simpler parameter update model
2012-07-08 jprocterJAL-961 JAL-976 allow access to service URI for paramet...
2012-07-08 jprocterJAL-961 JAL-976 recover current settings from associate...
2012-07-08 jprocterJAL-976 pick an available instance of a service based...
2012-07-08 jprocterbugfix - use currently held parameters
2012-07-08 jprocterJAL-976 - storing service parameters on the view model
2012-07-06 jprocterJAL-976 test if the sliders have been modified from...
2012-07-06 jprocterunique URI for service type
2012-07-06 jprocterJAL-961 JAL-976 abstracted container for dynamic calcul...
2012-07-05 Anne MenardAdd support RNAML format
2012-07-03 jprocterJAL-961 allow calcId to be specified independently...
2012-07-02 jprocterJAL-974 create graduated feature colours for annotation...
2012-06-20 jprocterformatting
2012-06-19 jprocterJAL-976 JAL-975 JAL-1119 - pass on any existing paramet...
2012-06-19 jprocterJAL-975 JAL-1119 - prototype adjustable AACons paramete...
2012-06-19 jprocterJAL-975 - doh! valid result if width matches *ungapped...
2012-06-19 jprocterJAL-975 - bespoke AACons settings object to save curren...
2012-06-19 jprocterJAL-975 - ensure we only submit ungapped, padded alignm...
2012-06-14 jprocterJAL-975 JAL-1002 ensure custom parameters are actually...
2012-06-14 jprocterJAL-976 - make sure annotation panel is updated to...
2012-06-14 jprocterJAL-961 JAL-976 kill any existing AACon job if a new...
2012-06-14 jprocterJAL-1003 visual delay when running a sequence or alignm...
2012-06-14 jprocterJAL-961 JAL-976 tweaked way that AACons client is regis...
2012-06-14 jprocterformatting
2012-06-14 jprocterformatting
2012-06-07 jprocterJAL-976 ensure job id gets written out if there's an...
2012-06-04 jprocterjavatidy
2012-05-23 jprocterTODO for JAL-976
2012-05-23 jprocterJAL-961 - annotatable datamodel objects can be queried...
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