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Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha/JAL-3066_Jalview_212_slivka...
[jalview.git]
/
src
/
jalview
/
ws
/
jws2
/
2019-10-10
Jim Procter
JAL-3070 registerWorker start its thread automatically...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3066 report job ID when submitted
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3070 JAL-3066 provide standard concrete instances...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3070 formatting
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 alignment analysis service worker UI and setti...
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 call checkDone() ASAP to avoid race condition...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 decouple WsMenuEntryProviderI code from JABAWS
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 reorganise prior to refactor
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 make AlignCalcUI service code work only with...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 discoverers return ServiceWithParameter, now...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 decontaminate the ‘preferred service’ methods...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 detect failed/broken annotation web service...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 pull up generic methods for an automatic align...
tree
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commitdiff
2019-10-01
Mateusz Warowny
JAL-3066 Sequence annotation services.
tree
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commitdiff
2019-09-26
Jim Procter
JAL-3070 JAL-3066 JAL-3067 refactor annotation web...
tree
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commitdiff
2019-09-24
Jim Procter
JAL-3070 tidying
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3066 JAL-3070 pull up non-jabaws specific service...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 configure annotation service manager from...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 rename AbstractJabaCalcWorker to SeqAnnotation...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 ensure RNAAliFold annotation rows display...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 formatting
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 detect presence of existing JABA RNAAliFold...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 match AbstractJabaCalcWorker’s annotation...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 javadoc for (mostly) jabaws specific methods
tree
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commitdiff
2019-09-20
Jim Procter
JAL-3070 rough-and-ready refactor of JABA SequenceAnnot...
tree
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commitdiff
2019-09-20
Jim Procter
JAL-3070 JAL-1379 deferred work on annotation based...
tree
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commitdiff
2019-09-06
Mateusz Warowny
JAL-3066 Working custom parameters for clustalo
tree
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commitdiff
2019-07-10
Jim Procter
JAL-3070 standard way of storing/recovering documentati...
tree
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commitdiff
2019-07-10
Jim Procter
JAL-3070 remove final reference to Jws2Instance
tree
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commitdiff
2019-07-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
tree
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commitdiff
2019-06-04
Jim Procter
Merge branch 'develop' into developtomchmmer
tree
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commitdiff
2019-03-21
Ben Soares
JAL-3130 Replaced deprecated Class.newInstance() with...
tree
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
tree
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commitdiff
2018-09-21
gmungoc
JAL-3120 preserve feature colour/mincolour/maxcolour...
bug/JAL-3120restoreFeatureColour
tree
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commitdiff
2018-08-03
Jim Procter
JAL-3070 MsaWSClient doens’t depend on Jws2Instance...
tree
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commitdiff
2018-08-03
Jim Procter
JAL-3070 web service handle with UIinfo.hasParameters...
tree
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commitdiff
2018-08-02
Jim Procter
JAL-3070 base interface for service endpoint implementa...
tree
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commitdiff
2018-08-01
Jim Procter
JAL-3070 refactored Client specific code from jalview...
tree
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commitdiff
2018-07-27
Jim Procter
JAL-3070 pull up sequence anonymisation hash, presets...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 pull up logic for offering a parameters dialog...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 abstract class for services with adjustable...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 use ArgumentI in all public constructors,...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 pull up setWebService and alignFrame reference
tree
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commitdiff
2018-07-23
Jim Procter
JAL-3070 pushed down JABAWS specific args for WsJobPara...
tree
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commitdiff
2018-07-23
Jim Procter
JAL-3070 refactored JABAWS specific jalview.gui.WsJobPa...
tree
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commitdiff
2018-07-23
Jim Procter
Merge branch 'features/mchmmer' into merge/wsinterfaces...
tree
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commitdiff
2018-07-20
Jim Procter
JAL-3070 pull up hostURL and postURL to UIinfo and...
tree
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commitdiff
2018-07-20
Jim Procter
JAL-3070 core service descriptors for JABAWS services...
tree
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commitdiff
2018-05-14
gmungoc
JAL-2989 support value display names for Option or...
tree
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commitdiff
2018-04-20
gmungoc
JAL-591 OptionBox FlowLayout, tweaks to wrapping of...
tree
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commitdiff
2018-04-16
gmungoc
JAL-2937 use preferences for presets, simplify some...
tree
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commitdiff
2018-02-20
gmungoc
Merge branch 'develop' into features/mchmmer
tree
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commitdiff
2017-10-27
gmungoc
JAL-1793 spike branch updated to latest
tree
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commitdiff
2017-10-26
Jim Procter
Merge branch 'feature/JAL-2488finalize' into develop
tree
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commitdiff
2017-10-25
Jim Procter
Merge branch 'bug/JAL-2392_deadlockonpdbdisplay' into...
tree
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commitdiff
2017-10-25
Jim Procter
JAL-2790 provide a cancel button for JABAWS and AACon...
tree
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commitdiff
2017-10-24
gmungoc
JAL-2738 update spike branch with latest
tree
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commitdiff
2017-10-12
Jim Procter
JAL-2773 add new flag to paintAlignment(updateOverview...
features/JAL-2773_dontalwaysrecolourstructureonrepaintofoverview
tree
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commitdiff
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
tree
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commitdiff
2017-09-01
gmungoc
JAL-2488 remove finalize methods
tree
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commitdiff
2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
tree
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commitdiff
2017-08-18
TZVanaalten
Merge branch 'develop' into features/hmmer
tree
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 choose appropriate alphabet for filtering...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 source formatting
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2335 filterNonStandardResidues configurable for...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 flag and filter to exclude non-standard amino...
tree
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commitdiff
2017-08-14
Jim Procter
JAL-2663 source formatting
tree
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commitdiff
2017-08-10
TZVanaalten
JAL-2629 hmmalign now correctly creates a new frame
tree
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commitdiff
2017-06-09
gmungoc
JAL-2446 merged to spike branch
tree
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commitdiff
2017-05-29
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-25
gmungoc
JAL-2050 make SequenceFeature.score final, adjust const...
tree
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commitdiff
2017-05-23
Jim Procter
JAL-2549 replace JABAWS 2.1 with 2.2 client and remove...
tree
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commitdiff
2017-04-24
kiramt
JAL-2388 Hidden cols separated from column selection...
tree
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commitdiff
2017-03-23
kiramt
JAL-2314 Tweaks to stop thread sync issues
tree
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commitdiff
2017-03-23
kiramt
JAL-2314 Tidies
tree
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commitdiff
2016-12-16
gmungoc
JAL-2360 refactoring for JalviewColourScheme enum,
tree
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commitdiff
2016-11-24
tcofoegbu
JAL-2326 updated references of JOptionPane to JvOptionPane
tree
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commitdiff
2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
tree
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commitdiff
2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 source formatting
tree
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commitdiff
2016-07-18
Jim Procter
Merge branch 'features/JAL-2068groovyAnnotationWorker...
tree
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commitdiff
2016-07-01
gmungoc
JAL-2110 bug fixing and tidying for get cross-refs
tree
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commitdiff
2016-06-21
Jim Procter
Merge branch 'features/JAL-2110_crossRefDuplications...
tree
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commitdiff
2016-06-21
Jim Procter
Merge branch 'features/JAL-1956_featureStyles' into...
tree
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commitdiff
2016-06-20
Jim Procter
Merge branch 'develop' into features/JAL-2068groovyAnno...
features/JAL-2068groovyAnnotationWorker
tree
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commitdiff
2016-06-19
Jim Procter
JAL-2110 JAL-2131 JAL-1765 remove reference to jalview...
tree
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commitdiff
2016-05-12
gmungoc
JAL-2104 format tooltips to wrap correctly
tree
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commitdiff
2016-05-10
gmungoc
Merge branch 'develop' into features/JAL-1956_featureStyles
tree
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commitdiff
2016-04-26
gmungoc
JAL-2068 deleting user-defined annotation removes the...
tree
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commitdiff
2016-04-22
gmungoc
JAL-2068 redundant implements clauses removed
tree
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commitdiff
2016-02-24
gmungoc
JAL-2015 JAL-1956 rollout of FeatureColourI in place of
JAL-1956_featureStyles
tree
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commitdiff
2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in src
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-09-06
Jim Procter
JAL-1645 JAL-1355 UI/i18n: added missing messages,...
tree
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commitdiff
2015-09-01
gmungoc
JAL-1355 user error message text externalised
tree
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commitdiff
2015-08-27
gmungoc
JAL-1544 message label corrected
tree
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commitdiff
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