git://source.jalview.org
/
jalview.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first
⋅
prev
⋅
next
JAL-674 fix test properties path and add properties file
[jalview.git]
/
src
/
jalview
/
2014-09-18
gmungoc
JAL-1360 refactored utility method to ColorUtils class
tree
|
commitdiff
2014-09-17
gmungoc
Correct colour for text when colour set
tree
|
commitdiff
2014-09-17
gmungoc
JAL-1360 refactored for consistent lighter/darker for
tree
|
commitdiff
2014-09-17
gmungoc
JAL-1360 workaround for user defined colours display...
tree
|
commitdiff
2014-09-12
j.procter@dundee...
JAL-1486 JAL-1543 pushed alignment viewport->view-...
tree
|
commitdiff
2014-09-12
j.procter@dundee...
formatting and organise imports
tree
|
commitdiff
2014-09-12
j.procter@dundee...
JAL-1486 fix: pass selected region to jalview.io via...
tree
|
commitdiff
2014-09-12
j.procter@dundee...
JAL-1199 add stockholm output to list of AppletFormatAd...
tree
|
commitdiff
2014-09-12
j.procter@dundee...
JAL-1486 JAL-535 refactor code for trimming alignment...
tree
|
commitdiff
2014-09-12
j.procter@dundee...
JAL-535 tidy interface definition and documentation
tree
|
commitdiff
2014-07-22
j.procter@dundee...
JAL-1333 fix imports
tree
|
commitdiff
2014-07-22
j.procter@dundee...
JAL-1333 JAL-1533 todo to get Chimera superposing prope...
tree
|
commitdiff
2014-07-22
j.procter@dundee...
JAL-1333 more superposition debugging and deadlock...
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-1333 allow reuse of existing chimera for new or...
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-1333 more refinements - deadlocks still possible...
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-674 futzing with bugs
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-795 take colour from annotation if colour is present
tree
|
commitdiff
2014-07-18
j.procter@dundee...
ensure the dataset is instantiated before materialising...
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-1379 new look JPred results
tree
|
commitdiff
2014-07-18
j.procter@dundee...
JAL-1520 switch between Protein and non-canonical RNA...
tree
|
commitdiff
2014-07-08
j.procter@dundee...
JAL-1333 allow reuse of existing viewers (of a specifie...
tree
|
commitdiff
2014-07-08
j.procter@dundee...
JAL-1333 more efficient color statement
tree
|
commitdiff
2014-07-04
j.procter@dundee...
JAL-1333 more abstraction and refactoring and working...
tree
|
commitdiff
2014-07-03
j.procter@dundee...
Merge branch 'Release_2_8_2_Branch' into features/JAL...
tree
|
commitdiff
2014-07-03
j.procter@dundee...
Merge branch 'hotfix/JAL-1530' into develop
tree
|
commitdiff
2014-07-03
j.procter@dundee...
Merge branch 'hotfix/JAL-1530' into Release_2_8_2_Branch
tree
|
commitdiff
2014-07-03
Jim Procter
fixes JAL-1530
tree
|
commitdiff
2014-07-02
Jim Procter
revalidate appears to have gone away ?? (java 1.7 upgra...
tree
|
commitdiff
2014-07-02
Jim Procter
formatting
tree
|
commitdiff
2014-07-02
Jim Procter
JAL-1333 JAL-1527 refactors to create core structure...
tree
|
commitdiff
2014-06-23
Jim Procter
JAL-1526 simple function to write a snapshot of the...
tree
|
commitdiff
2014-06-12
Jim Procter
Merge branch 'hotfix/JAL-1524' into develop
tree
|
commitdiff
2014-06-12
Jim Procter
Merge branch 'hotfix/JAL-1524' into Release_2_8_2_Branch
tree
|
commitdiff
2014-06-12
Jim Procter
JAL-1524 fix
tree
|
commitdiff
2014-06-10
Jim Procter
JAL-1379 a JPred v3.0.1 client via JABA 2.1
tree
|
commitdiff
2014-06-10
Jim Procter
JAL-1379 allow services with an MSA interface to create...
tree
|
commitdiff
2014-06-10
Jim Procter
tidy source
tree
|
commitdiff
2014-06-10
Jim Procter
JAL-1379 refactor Jws2 service client so dynamic servic...
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1519 make the splash screen larger/more readable
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1519 - tidy build properties management code
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1519 fix author update issue (doh)
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1517 source formatting
tree
|
commitdiff
2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
tree
|
commitdiff
2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
tree
|
commitdiff
2014-06-05
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
tree
|
commitdiff
2014-06-04
Jim Procter
JAL-952 fixed unresolved conflict breaking build
tree
|
commitdiff
2014-06-04
Jim Procter
JAL-952 fixed unresolved conflict breaking build
tree
|
commitdiff
2014-06-04
Jim Procter
JAL-1355 key typo
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-690 jvp rather than jar for save/restore state...
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-690 JAL-1503 update file types/extensions in Jalvie...
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-1473 exclude score models not compatible with PCA...
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-690 add .jvp as default jalview project filetype
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-1512 comment out for 2.8.1 release
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-1512 fix calculation once again and include score...
tree
|
commitdiff
2014-06-03
Jim Procter
JAL-1473 make it easier to generate HTML documentation...
tree
|
commitdiff
2014-06-02
Jim Procter
JAL-1512 rejig buggy conservation-basesd score matrix...
tree
|
commitdiff
2014-05-28
Jim Procter
JAL-1507 bugfix
tree
|
commitdiff
2014-05-27
Jim Procter
JAL-1507 added loop to throw dummy javascript calls...
tree
|
commitdiff
2014-05-27
Jim Procter
JAL-1402 conditional logic to ensure annotation & label...
tree
|
commitdiff
2014-05-27
Jim Procter
JAL-1508 make default font size 11pt for embedded menus...
tree
|
commitdiff
2014-05-23
Jim Procter
JAL-1445 extend functionality to select or toggle selec...
tree
|
commitdiff
2014-05-22
Jim Procter
JAL-1503 update version in GPL header
tree
|
commitdiff
2014-05-13
Jim Procter
Merge branch 'bugfix/JAL-1239' into develop
tree
|
commitdiff
2014-05-13
Jim Procter
JAL-1239 cancelled flag should be checked and counted
tree
|
commitdiff
2014-05-13
Jim Procter
JAL-1239 make doubly sure sub job status is set to...
tree
|
commitdiff
2014-05-12
Jim Procter
Merge branch 'JAL-1397' into develop
tree
|
commitdiff
2014-05-12
Jim Procter
JAL-1397 catch other random version strings
tree
|
commitdiff
2014-05-12
Jim Procter
patch for regression introduced JAL-1397
tree
|
commitdiff
2014-05-02
Jim Procter
Merge branch 'JAL-1397' into develop
tree
|
commitdiff
2014-05-02
Jim Procter
JAL-1397 JAL-1066 JAL-1233 refactored annotation colour...
tree
|
commitdiff
2014-05-02
Jim Procter
JAL-1369 JAL-1397 version check to support correct...
tree
|
commitdiff
2014-05-02
Jim Procter
formatting
tree
|
commitdiff
2014-05-02
Jim Procter
JAL-1233 JAL-1066 fix for JAL-1397 test: allow per...
tree
|
commitdiff
2014-05-01
Jim Procter
remove todo
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1492 formatting and squash NPEs
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1092 TODO - allow Jalview/JalviewLite to generate...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1492 JAL-1397 make AnnotatedCollectionI context...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1492 JAL-1397 JAL-643 JAL-969 pull up global and...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1492 JAL-1397 JAL-643 JAL-969 factory method to...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1492 JAL-1397 JAL-643 JAL-969 modifiable flag on...
tree
|
commitdiff
2014-05-01
Jim Procter
javadoc
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-1497 check to see if tree structure is ready for...
tree
|
commitdiff
2014-05-01
Jim Procter
fix for JAL-1495 - initialise menu entry from current...
tree
|
commitdiff
2014-05-01
Jim Procter
fix for JAL-1494 tweaked logic to fix NPEs and modify...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-969 remove unnecessary overrides
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-961 configure conservation worker from alignment...
tree
|
commitdiff
2014-05-01
Jim Procter
JAL-961 store result of conservation analysis worker...
tree
|
commitdiff
2014-05-01
Jim Procter
make sure valid value for non-gapped calculation with...
tree
|
commitdiff
2014-04-29
Jim Procter
JAL-643 - abstracted colourscheme components to allow...
tree
|
commitdiff
2014-04-29
Jim Procter
Merge branch 'JAL-1340_redundancy' into develop
tree
|
commitdiff
2014-04-28
Jim Procter
JAL-1340 mark redundant sequences as soon as redundancy...
tree
|
commitdiff
2014-04-28
Jim Procter
JAL-1340 simpler and more efficient interactive highlig...
tree
|
commitdiff
2014-04-28
Jim Procter
JAL-1340 ensure slider value wide enough to see three...
tree
|
commitdiff
2014-04-27
Jim Procter
Merge branch 'JAL-1322' into develop
tree
|
commitdiff
2014-04-27
Jim Procter
JAL-1322 avoid rounding error causing non functional...
tree
|
commitdiff
2014-04-27
Jim Procter
JAL-1322 allow slider to reach maximum value for parameter
tree
|
commitdiff
2014-04-27
Jim Procter
JAL-1322 only update slider when return is pressed
tree
|
commitdiff
2014-04-27
Jim Procter
Merge branch 'JAL-952_rnahelix' into Release_2_8_1_Branch
tree
|
commitdiff
next