2017-02-03 |
gmungoc | JAL-2379 'direct' pairwise score calculation for PCA... |
tree | commitdiff |
2017-02-01 |
gmungoc | JAL-2371 (slight!) simplification of isApplicableTo() |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2371 commented code removed only |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2371 rename global/viewportColourScheme to residueS... |
tree | commitdiff |
2017-01-31 |
gmungoc | JAL-2385 more tests/bug fixes mostly for gui.SliderPane... |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2379 commented out code removed |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2371 CollectionColourScheme renamed ResidueShader... |
tree | commitdiff |
2017-01-27 |
gmungoc | JAL-2360 JAL-2371 updates from review CR-JAL-1 |
tree | commitdiff |
2017-01-27 |
kiramt | JAL-2366 Removed unneeded setEnabled calls |
tree | commitdiff |
2017-01-26 |
gmungoc | JAL-2360 corrected comment |
tree | commitdiff |
2017-01-26 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-01-26 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-26 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-26 |
kiramt | JAL-2316 Updated to use identifiers jalview service |
tree | commitdiff |
2017-01-26 |
gmungoc | Merge branch 'develop' into features/JAL-2379pcaMemory |
tree | commitdiff |
2017-01-26 |
gmungoc | JAL-2344 test fix and code tidy for review comments |
tree | commitdiff |
2017-01-26 |
gmungoc | JAL-2380 code tidy after review |
tree | commitdiff |
2017-01-25 |
gmungoc | JAL-2344 push Cache.getProperty("LAST_DIRECTORY") insid... |
tree | commitdiff |
2017-01-23 |
gmungoc | JAL-2379 made SparseMatrix.divide() so as to exactly... |
tree | commitdiff |
2017-01-23 |
gmungoc | JAL-2386 unit tests for change colour (and minor refact... |
tree | commitdiff |
2017-01-23 |
gmungoc | JAL-2386 simplify changeColour (doesn't change colour... |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2385 tweak to applet 'switch colour slider context' |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2385 update slider settings when switching slider... |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2383 fixup from last merge |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2383 check for null, spelling |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2383 make popup colour menu order and wording consi... |
tree | commitdiff |
2017-01-20 |
gmungoc | JAL-2383 restore group conservation slider setting... |
tree | commitdiff |
2017-01-20 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-19 |
gmungoc | JAL-2383 restore PID colour threshold from project... |
tree | commitdiff |
2017-01-19 |
gmungoc | JAL-2370 corrected applet mouse drag, refactored into... |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-1933 update threshold on focus lost in text field features/JAL-2295setChimeraAttributes |
tree | commitdiff |
2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2295setChimera... |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-2370 fix bug when hiding a range including two... |
tree | commitdiff |
2017-01-17 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-17 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-2379 use SparseMatrix for encoded sequences, tidy... |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-2379 SparseMatrix alternative to Matrix, both MatrixI |
tree | commitdiff |
2017-01-17 |
gmungoc | JAL-2379 SparseDoubleArray added (for use by SparseMatrix) |
tree | commitdiff |
2017-01-16 |
gmungoc | JAL-2380 fix Matrix.postMultiply() |
tree | commitdiff |
2017-01-12 |
gmungoc | JAL-2379 null references to PCA model when panel is... |
tree | commitdiff |
2017-01-12 |
gmungoc | JAL-2344 now flagging formats as 'identifiable' instead... |
tree | commitdiff |
2017-01-11 |
gmungoc | JAL-2344 separated AlignmentFileI into AlignmentFileRea... |
tree | commitdiff |
2017-01-11 |
gmungoc | JAL-2344 FileFormats singleton for formats, FileFormatI... |
tree | commitdiff |
2017-01-11 |
gmungoc | JAL-2344 addSequence() method added to support Groovy... |
tree | commitdiff |
2017-01-10 |
gmungoc | JAL-2377 avoid infinite loop formatting 1.0E-310 |
tree | commitdiff |
2017-01-10 |
kiramt | JAL-2316 Separate label/db name in UrlProviders. Unit... |
tree | commitdiff |
2017-01-09 |
kiramt | JAL-2316 Prevent applet from loading null links into... |
tree | commitdiff |
2017-01-09 |
gmungoc | JAL-2371 pull up isNucleotide to SequenceCollectionI |
tree | commitdiff |
2017-01-09 |
gmungoc | JAL-2371 remove ColourSchemeI.findColour(c), pure inter... |
tree | commitdiff |
2017-01-09 |
kiramt | Merge remote-tracking branch 'origin/develop' into... |
tree | commitdiff |
2017-01-06 |
gmungoc | JAL-2371 slight simplification of findColour overrides |
tree | commitdiff |
2017-01-06 |
gmungoc | JAL-2371 correct Clustal, Blosum, PID colouring of... |
tree | commitdiff |
2017-01-06 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-06 |
gmungoc | JAL-2360 findColour() with no args removed from ColourS... |
tree | commitdiff |
2017-01-06 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-06 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-05 |
gmungoc | JAL-2374 fix popup out by one and multiple groups bugs |
tree | commitdiff |
2017-01-05 |
gmungoc | Merge branch 'features/JAL-2360colourSchemeApplicabilit... |
tree | commitdiff |
2017-01-05 |
gmungoc | Merge branch 'develop' into features/JAL-2360colourSche... |
tree | commitdiff |
2017-01-05 |
gmungoc | JAL-2373 set state of Above PID, By Conservation in... |
tree | commitdiff |
2017-01-05 |
gmungoc | JAL-2371 tests added |
tree | commitdiff |
2017-01-04 |
gmungoc | JAL-2371 CollectionColourScheme wraps ColourSchemeI |
tree | commitdiff |
2016-12-29 |
gmungoc | JAL-2630 first pass groovy colour scheme (with slight... |
tree | commitdiff |
2016-12-23 |
gmungoc | JAL-2360 removed UserDefinedColours.userColourSchemes |
tree | commitdiff |
2016-12-23 |
gmungoc | JAL-2120 JAL-2360 remove obsolete PDBViewer |
tree | commitdiff |
2016-12-22 |
gmungoc | JAL-2360 fix bug that prematurely created a SequenceGroup |
tree | commitdiff |
2016-12-22 |
gmungoc | JAL-2360 structure viewers now using ColourMenuHelper... |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 set new/loaded colour scheme name correctly |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 ColourMenuHelper now builds and selects items... |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 comment only |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 tidy up, simplify isApplicableTo test |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 no RNAHelices colouring for groups |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2361 Blosum is enabled for peptide |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-1421 add types to Map |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 fix incorrect action on Cancel user defined... |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 tidy spelling and file contents order only |
tree | commitdiff |
2016-12-21 |
gmungoc | JAL-2360 Javadoc and test cases for findAnnotation |
tree | commitdiff |
2016-12-20 |
gmungoc | JAL-2360 testRegisterColourScheme to demonstrate a... |
tree | commitdiff |
2016-12-20 |
gmungoc | JAL-2360 ColourSchemes holds configured schemes, AlignF... |
tree | commitdiff |
2016-12-19 |
gmungoc | JAL-2360 amended toAppletParameter() for reproducible... |
tree | commitdiff |
2016-12-19 |
gmungoc | JAL-2361 select colour menu item by matching its name... |
tree | commitdiff |
2016-12-16 |
kiramt | JAL-2316 Added database name column to URL links table... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-2356 enhanced unit test to verify reuse (or not... |
tree | commitdiff |
2016-12-16 |
Jim Procter | JAL-2360 report line number when threshold cannot be... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-2360 added UserColourScheme.toAppletParameter+test... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-2360 getColour() renamed to getColourScheme(),... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-1705 JAL-98 use SortedMap as more accurate type... |
tree | commitdiff |
2016-12-16 |
gmungoc | JAL-2360 refactoring for JalviewColourScheme enum, |
tree | commitdiff |
2016-12-15 |
kiramt | JAL-2316 Changes following review. |
tree | commitdiff |
2016-12-14 |
gmungoc | JAL-2360 added check for null annotations array |
tree | commitdiff |
2016-12-14 |
Jim Procter | Merge branch 'patch/JAL-2197_jpredforjnets' into develop |
tree | commitdiff |
2016-12-13 |
kiramt | Merge branch 'develop' into features/JAL-2316 |
tree | commitdiff |
2016-12-13 |
gmungoc | JAL-2365 test for lightgray, darkgray not lightGray... |
tree | commitdiff |
2016-12-13 |
gmungoc | JAL-2360 code formatting only and if-else changed to... |
tree | commitdiff |
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