2017-04-19 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-04-19 |
gmungoc | JAL-2480 cache min-max score values per sequence and... |
tree | commitdiff |
2017-04-19 |
tcofoegbu | JAL-2482 added null check |
tree | commitdiff |
2017-04-19 |
gmungoc | JAL-2483 use SequenceFeatures to look up groups, types... |
tree | commitdiff |
2017-04-18 |
tcofoegbu | JAL-2482 Bugfix |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 subtract from total length on deleting feature |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 test coverage / bug fixes / javadoc |
tree | commitdiff |
2017-04-18 |
gmungoc | JAL-2480 SequenceFeaturesI encapsulates features api |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 comment updates |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 promote Range from test to src to replace... |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 tidied up / generalised binary search in Featu... |
tree | commitdiff |
2017-04-17 |
gmungoc | JAL-2446 add call to SequenceFeatures.delete(); use... |
tree | commitdiff |
2017-04-17 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-04-12 |
gmungoc | JAL-2446 getGroups, getFeatures for positional/non... |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 find feature types for one or more groups... |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 getFeatureTypesForGroup() added |
tree | commitdiff |
2017-04-11 |
gmungoc | JAL-2446 added getFeatureGroups |
tree | commitdiff |
2017-04-10 |
tcofoegbu | Merge branch 'bug/JAL-2255_seq-fetcher-broken-on-linux... |
tree | commitdiff |
2017-04-10 |
tcofoegbu | JAL-2255 Bug fix bug/JAL-2255_seq-fetcher-broken-on-linux |
tree | commitdiff |
2017-04-10 |
tcofoegbu | Merge branch 'develop' into bug/JAL-2255_seq-fetcher... |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2446 SequenceFeatures.hasFeatures() added |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2446 FeatureStore.isEmpty() added |
tree | commitdiff |
2017-04-10 |
gmungoc | JAL-2361 option to save on OK of changed named colour... |
tree | commitdiff |
2017-04-07 |
gmungoc | JAL-2446 fix size maintenance during add |
tree | commitdiff |
2017-04-07 |
gmungoc | JAL-2446 added delete/contains to pseudo-random tests... |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2361 make a modified saved scheme the backout check... |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2446 added contains, delete, checks for inclusion... |
tree | commitdiff |
2017-04-06 |
gmungoc | JAL-2446 pseudo-random test of findOverlaps, bug fix... |
tree | commitdiff |
2017-04-05 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2384 JAL-2371 update ResidueShader on change of... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2361 simplify constructors, select unsaved but... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2361 apply any saved changes to current colour... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2446 various get and find methods added with test... |
tree | commitdiff |
2017-04-05 |
gmungoc | JAL-2446 method isNonPositional() added |
tree | commitdiff |
2017-04-04 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-04-03 |
gmungoc | Merge branch 'develop' into bug/JAL-2314 |
tree | commitdiff |
2017-04-03 |
gmungoc | Merge branch 'develop' into bug/JAL-2461 bug/JAL-2461 |
tree | commitdiff |
2017-04-03 |
gmungoc | JAL-2446 pseudo-random generator unit test, and fixes... |
tree | commitdiff |
2017-03-31 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2405 additional checks for circular reference in... |
tree | commitdiff |
2017-03-31 |
gmungoc | Merge branch 'develop' into bug/JAL-2431splitFrameNewView bug/JAL-2431splitFrameNewView |
tree | commitdiff |
2017-03-31 |
gmungoc | JAL-2430 code tidy, unit test for Jmol hidden column... |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups bug/JAL-1608createGroups |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-1608 leave Create Group, Remove Group menu items... |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2401 code and help tidy for review comments |
tree | commitdiff |
2017-03-30 |
gmungoc | JAL-2401 don't apply lower case colour to upper case |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2399textColour bug/JAL-2399textColour |
tree | commitdiff |
2017-03-30 |
gmungoc | Merge branch 'develop' into bug/JAL-2346annotationChoice |
tree | commitdiff |
2017-03-29 |
gmungoc | Merge branch 'develop' into bug/JAL-1608createGroups |
tree | commitdiff |
2017-03-24 |
Jim Procter | JAL-2360 fix applet build by separating castor XML... |
tree | commitdiff |
2017-03-24 |
kiramt | JAL-2314 Tidy up |
tree | commitdiff |
2017-03-24 |
gmungoc | JAL-2464 fix cancel tree print behaviour |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Tweaks to stop thread sync issues |
tree | commitdiff |
2017-03-23 |
gmungoc | JAL-2464 fix cancel tree print behaviour |
tree | commitdiff |
2017-03-23 |
kiramt | JAL-2314 Tidies |
tree | commitdiff |
2017-03-22 |
gmungoc | JAL-2446 optimised new method to find feature colour... |
tree | commitdiff |
2017-03-22 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2461 Removed DAS error stack trace, updated message |
tree | commitdiff |
2017-03-22 |
kiramt | JAL-2388 Reinstated original overview checks for annota... |
tree | commitdiff |
2017-03-22 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-03-21 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList features/JAL-653_JAL-1766_htslib_refseqsupport |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2438 removed (non-functional) lastSeq, lastSequence... |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2243 update discovered features on opening structur... |
tree | commitdiff |
2017-03-21 |
gmungoc | JAL-2438 check for null FeatureRenderer |
tree | commitdiff |
2017-03-21 |
Jim Procter | Merge branch 'features/JAL-2388OverviewWindow' into... |
tree | commitdiff |
2017-03-20 |
gmungoc | JAL-2446 FeatureStore with NCList - work in progress |
tree | commitdiff |
2017-03-20 |
Jim Procter | Merge branch 'bug/JAL-2421overviewboxflicker' into... |
tree | commitdiff |
2017-03-20 |
kiramt | JAL-2388 Comment typo |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2437 Synchronization corrections and unit tests |
tree | commitdiff |
2017-03-17 |
kiramt | JAL-2388 Renamed column and row subtraction functions |
tree | commitdiff |
2017-03-16 |
Jim Procter | Merge branch 'merges/develop_JAL2295setChimeraAttribute... |
tree | commitdiff |
2017-03-16 |
Jim Procter | JAL-1933 refactor parameter for code clarity |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Applied ViewportRanges to code |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Renamed viewport position props to viewport... |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2388 Applet update for overview panel |
tree | commitdiff |
2017-03-16 |
kiramt | JAL-2439 Out-by-one in setting endRes/endSeq |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2431 show cDNA consensus after New View in split... |
tree | commitdiff |
2017-03-15 |
kiramt | JAL-2388 Unit tests and tidies |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2443 push getResidueBoxColour inside getResidueColour |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 corrected getFeatureRenderer() |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2442 applet feature transparency also on overview... |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 handle null FeatureRenderer in FeatureColourFinder |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 refactored checks for 'no features displayed' |
tree | commitdiff |
2017-03-15 |
gmungoc | JAL-2438 clarify code and javadoc, reinstate updateFeat... |
tree | commitdiff |
2017-03-15 |
gmungoc | Merge branch 'develop' into bug/JAL-2436featureRenderer... |
tree | commitdiff |
2017-03-14 |
kiramt | JAL-2388 Working overview panel |
tree | commitdiff |
2017-03-14 |
kiramt | JAL-2439 Fixes to out-by-one sequence indexing in gui... |
tree | commitdiff |
2017-03-14 |
kiramt | JAL-2388 New hidden cols/seqs functions to support... |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 unit test, fixes, Javadoc updates |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 Javadoc updates |
tree | commitdiff |
2017-03-14 |
gmungoc | JAL-2438 comment/Javadoc tidies |
tree | commitdiff |
2017-03-13 |
gmungoc | JAL-2438 corrected handling of default colour |
tree | commitdiff |
2017-03-13 |
gmungoc | JAL-2438 FeatureColourFinder refactored from FeatureRen... |
tree | commitdiff |
2017-03-10 |
kiramt | JAL-2437 Fixed reordering of sequences when hiding... |
tree | commitdiff |
2017-03-10 |
kiramt | JAL-2388 Moving some alignment panel logic into overvie... |
tree | commitdiff |
2017-03-09 |
kiramt | JAL-2426 Checks on conservation thread in case we are... |
tree | commitdiff |
2017-03-09 |
kiramt | JAL-2426 Removal of NPE in conservation thread when... |
tree | commitdiff |
2017-03-09 |
kiramt | JAL-2388 Minor fix for annotation graph, removed unit... |
tree | commitdiff |
2017-03-08 |
gmungoc | JAL-2430 colour columns hidden in alignment gray on... |
tree | commitdiff |
2017-03-08 |
gmungoc | JAL-2295 avoid quotes breaking attribute value parsing |
tree | commitdiff |
next |