2017-12-08 |
gmungoc | JAL-2843 read/write feature filters from/to Jalview... |
tree | commitdiff |
2017-12-08 |
gmungoc | JAL-2843 toStableString, fromString for Jalview feature... |
tree | commitdiff |
2017-11-24 |
gmungoc | JAL-2808 update spike to latest |
tree | commitdiff |
2017-11-24 |
gmungoc | JAL-2808 refine FeatureMatcher interface and matcher... |
tree | commitdiff |
2017-11-23 |
gmungoc | JAL-2808 update spike to latest (filter range tooltip... |
tree | commitdiff |
2017-11-23 |
gmungoc | JAL-2808 refactor KeyedMatcher as FeatureMatcher with... |
tree | commitdiff |
2017-11-22 |
gmungoc | JAL-2069 spike updated with latest (FeatureTypeSettings) |
tree | commitdiff |
2017-11-22 |
gmungoc | Merge branch 'develop' into features/JAL-1793VCF |
tree | commitdiff |
2017-11-22 |
gmungoc | JAL-2808 capture feature attributes datatype (Character... |
tree | commitdiff |
2017-11-15 |
gmungoc | JAL-2835 spike updated with latest |
tree | commitdiff |
2017-11-15 |
gmungoc | JAL-2835 support filter/colour by nested attribute... |
tree | commitdiff |
2017-11-10 |
gmungoc | JAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps |
tree | commitdiff |
2017-11-10 |
gmungoc | JAL-2829 unit tests for failing cases |
tree | commitdiff |
2017-11-02 |
gmungoc | JAL-2808 spike updated with latest |
tree | commitdiff |
2017-10-31 |
gmungoc | JAL-2792 test updated for 3 column table |
tree | commitdiff |
2017-10-27 |
gmungoc | JAL-1793 spike branch updated to latest |
tree | commitdiff |
2017-10-26 |
gmungoc | JAL-2792 html table for Feature Details report |
tree | commitdiff |
2017-10-24 |
gmungoc | JAL-2738 update spike branch with latest |
tree | commitdiff |
2017-10-23 |
Jim Procter | Merge branch 'bug/JAL-2682parseId' into develop |
tree | commitdiff |
2017-10-11 |
gmungoc | JAL-2772 check array bounds for sequence access bug/JAL-2772pdbArrayBounds |
tree | commitdiff |
2017-10-11 |
gmungoc | Merge branch 'bug/JAL-2742' into develop |
tree | commitdiff |
2017-10-11 |
gmungoc | JAL-2742 set HiddenColumns null for no hidden coluns... |
tree | commitdiff |
2017-10-11 |
kiramt | JAL-2742 test updates following review |
tree | commitdiff |
2017-10-11 |
kiramt | JAL-2742 minor test updates following review |
tree | commitdiff |
2017-10-03 |
gmungoc | JAL-2738 copy to spikes/mungo |
tree | commitdiff |
2017-09-26 |
kiramt | JAL-2742 uncomment test |
tree | commitdiff |
2017-09-26 |
kiramt | JAL-2742 CigarArray constructor unit test |
tree | commitdiff |
2017-09-25 |
gmungoc | JAL-2525 return no features if none matches ontology... |
tree | commitdiff |
2017-08-23 |
gmungoc | JAL-2481 a smidgin more test coverage of findFeatures |
tree | commitdiff |
2017-08-23 |
gmungoc | JAL-2682 non-regex sequence id parsing, and tests added |
tree | commitdiff |
2017-07-24 |
gmungoc | spike branch updated from latest features/JAL-2446 |
tree | commitdiff |
2017-07-19 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-07-05 |
gmungoc | JAL-147 additions to unit test, check for negative... |
tree | commitdiff |
2017-07-05 |
gmungoc | JAL-147 prevent overview box move up over hidden first... |
tree | commitdiff |
2017-06-30 |
gmungoc | JAL-2505 correct handling of change of feature type |
tree | commitdiff |
2017-06-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-29 |
kiramt | JAL-2597 Fix and unit test bug/JAL-2597 |
tree | commitdiff |
2017-06-27 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-24 |
gmungoc | JAL-2547 fix case of gap followed by enclosing contact... |
tree | commitdiff |
2017-06-22 |
gmungoc | JAL-2481 JAL-2593 JAL-2526 further optimisation of... |
tree | commitdiff |
2017-06-22 |
gmungoc | JAL-2480 simpler and safer test to avoid adding duplicates |
tree | commitdiff |
2017-06-21 |
gmungoc | JAL-2480 tidy generic initialisations, SequenceFeatures... |
tree | commitdiff |
2017-06-15 |
gmungoc | Merge branch 'bug/JAL-2386groupConservationColouring... |
tree | commitdiff |
2017-06-14 |
gmungoc | JAL-2598 Sequence.getSequence return a copy of the... |
tree | commitdiff |
2017-06-09 |
gmungoc | JAL-2446 merged to spike branch |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2526 correct boundary conditions for sequence left... |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2386 JAL-2570 use ResidueShader copy constructor... bug/JAL-2386groupConservationColouring |
tree | commitdiff |
2017-06-08 |
kiramt | JAL-2591 Refactor HiddenColumns to use ArrayList instea... |
tree | commitdiff |
2017-06-08 |
kiramt | JAL-2591 More HiddenColumns refactoring. Tests passing. |
tree | commitdiff |
2017-06-08 |
gmungoc | JAL-2526 cache first/last residue column positions... |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 Further refactoring (still incomplete) |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 More refactoring (incomplete) |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 Hidden columns regions can be output to string... |
tree | commitdiff |
2017-06-07 |
kiramt | JAL-2591 updated HiddenColumns::findHiddenRegionPositio... |
tree | commitdiff |
2017-06-07 |
gmungoc | JAL-2386 ensure group conservation shading is applied... |
tree | commitdiff |
2017-06-05 |
gmungoc | JAL-2480 remove redundant method, further test coverage |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2526sequenceCursor' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features/JAL-2526sequenceCursor |
tree | commitdiff |
2017-06-05 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 get bitset representing hidden columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 method taking a BitSet for hiding columns |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 fixed broken asserts for SequenceI.getInsertio... |
tree | commitdiff |
2017-06-04 |
Jim Procter | JAL-2291 SequenceI.getInsertionsAsBits for convenient... |
tree | commitdiff |
2017-06-02 |
gmungoc | JAL-2526 additional tests for findPosition with/without... |
tree | commitdiff |
2017-06-01 |
gmungoc | JAL-2754 Sequence.findFeatures(fromCol, toCol) features/JAL-2754findFeaturesByColumn |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'features/JAL-2446NCList' into features... |
tree | commitdiff |
2017-05-30 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2570 don't zap group colour scheme when mapping... |
tree | commitdiff |
2017-05-30 |
gmungoc | JAL-2526 first draft of findIndex/findPosition with... |
tree | commitdiff |
2017-05-29 |
gmungoc | JAL-2526 Sequence.findPositions to get residue position... |
tree | commitdiff |
2017-05-26 |
gmungoc | JAL-2480 move ContiguousI and Range to jalview.datamodel |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2557 removal of Sequence.sequenceFeatures |
tree | commitdiff |
2017-05-25 |
gmungoc | JAL-2050 make SequenceFeature.score final, adjust const... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 make SequenceFeature type, begin, end, feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 remove setters for SequenceFeature.begin,end... |
tree | commitdiff |
2017-05-24 |
gmungoc | Merge branch 'bug/JAL-2541cutWithFeatures' into feature... |
tree | commitdiff |
2017-05-24 |
gmungoc | JAL-2505 JAL-2542 SequenceFeatures.shift() to shift... |
tree | commitdiff |
2017-05-24 |
kiramt | JAL-2034 Added isDefined flag to SequenceGroup |
tree | commitdiff |
2017-05-23 |
gmungoc | JAL-2490 unit tests for getFeaturesForGroup |
tree | commitdiff |
2017-05-23 |
gmungoc | JAL-2490 tidy code and tests for feature export in... |
tree | commitdiff |
2017-05-22 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-22 |
gmungoc | JAL-2480 always include all non-positional features... |
tree | commitdiff |
2017-05-18 |
gmungoc | JAL-2541 fix to initSeqFrom (and minor code tidy);... |
tree | commitdiff |
2017-05-18 |
kiramt | JAL-2256 Corrected AllCols/Rows iterator behaviour... bug/JAL-2256 |
tree | commitdiff |
2017-05-16 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-16 |
Jim Procter | Merge branch 'bug/JAL-2507_rnasecstrstockholm' into... |
tree | commitdiff |
2017-05-15 |
Jim Procter | JAL-2507 fix test: knockon from capitalisation on secon... bug/JAL-2507_rnasecstrstockholm |
tree | commitdiff |
2017-05-15 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-12 |
gmungoc | JAL-2525 get sequence features for Ontology term(s... |
tree | commitdiff |
2017-05-12 |
gmungoc | JAL-2480 more efficient contains check on add; tidied... |
tree | commitdiff |
2017-05-09 |
gmungoc | JAL-2480 include sequenceFeatureStore in createDatasetS... |
tree | commitdiff |
2017-05-08 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-05 |
kiramt | Merge remote-tracking branch |
tree | commitdiff |
2017-05-05 |
kiramt | Merge remote-tracking branch 'origin/develop' into features/JAL-2388hiddencolumnschanges |
tree | commitdiff |
2017-05-05 |
kiramt | Merge remote-tracking branch 'origin/develop' into |
tree | commitdiff |
2017-05-03 |
Jim Procter | JAL-2503 AlignmentAnnotation.isQuantitative() test |
tree | commitdiff |
2017-05-03 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
2017-05-02 |
Jim Procter | Merge branch 'bug/JAL-2424getVisibleContigs' into develop |
tree | commitdiff |
2017-04-28 |
gmungoc | Merge branch 'develop' into features/JAL-2446NCList |
tree | commitdiff |
next |