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JAL-1950 represent duplicate sequences by their representative in the hit alignment
[jalview.git]
/
test
/
jalview
/
2015-11-17
Jim Procter
JAL-1950 represent duplicate sequences by their represe...
tree
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commitdiff
2015-11-09
Jim Procter
JAL-1950 test positioning of posterior probability...
tree
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commitdiff
2015-11-04
Jim Procter
JAL-1950 first stab at Hmmer3 JSON parser and alignment...
tree
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commitdiff
2015-10-28
Jim Procter
JAL-715 JAL-724 refactored multi harmony definition...
tree
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commitdiff
2015-10-22
gmungoc
JAL-1932 TrimRegionCommand bug fix, tests and purge...
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 add licensing
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 formatting
tree
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commitdiff
2015-10-08
Jim Procter
JAL-1894 organise imports
tree
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commitdiff
2015-10-05
Jim Procter
Merge branch 'develop' into features/JAL-1912_biojson...
tree
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commitdiff
2015-10-05
tcofoegbu
JAL-1726 updated test error msg
tree
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commitdiff
2015-10-01
tcofoegbu
JAL-1912 refactor annotation refsequence assignemnt...
tree
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commitdiff
2015-09-28
tcofoegbu
JAL-1896 revised implementation to construct a ColourSc...
tree
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commitdiff
2015-09-24
gmungoc
JAL-1905 parse url including & correctly
tree
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commitdiff
2015-09-24
gmungoc
JAL-1904 parse feature file colours on to alignment...
tree
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commitdiff
2015-09-24
tcofoegbu
JAL-1896 bugfix to enabled Jalview restore clustal...
tree
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commitdiff
2015-09-21
gmungoc
JAL-1152 small change to match revised annotation sorti...
tree
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commitdiff
2015-09-18
gmungoc
JAL-1270 disable test as not really a test and goes...
tree
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commitdiff
2015-09-16
gmungoc
JAL-1885 small fix to isVersionStringLaterThan plus...
tree
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commitdiff
2015-09-14
gmungoc
JAL-1880 updated mapping tests to ensure they handle...
tree
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commitdiff
2015-09-14
gmungoc
JAL-1270 test added for separatorListToArray
tree
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commitdiff
2015-09-14
gmungoc
JAL-1880 handle sequence offsets properly when mapping...
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 licencing for new files in test and utils
tree
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commitdiff
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
tree
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commitdiff
2015-09-09
gmungoc
JAL-1619 'align protein as cDNA' now leaves unmapped...
tree
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commitdiff
2015-09-07
gmungoc
JAL-1636 translate stop codon as '*', mouseover * as...
tree
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commitdiff
2015-09-07
gmungoc
JAL-1152 check 'autocalculated' not 'null sequenceRef...
tree
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commitdiff
2015-09-05
Jim Procter
JAL-1805 move misassigned test from Functional to Network
tree
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commitdiff
2015-09-03
tcofoegbu
merge
tree
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commitdiff
2015-09-03
tcofoegbu
JAL-793 use default custom export settings for html...
tree
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commitdiff
2015-09-03
gmungoc
JAL-1828 lookup table to convert MSE to MET when parsin...
tree
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commitdiff
2015-09-02
gmungoc
JAL-1264 test made i18n robust
tree
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commitdiff
2015-09-02
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2015-09-02
Jim Procter
JAL-1772 non-functional test added. not doing any more...
tree
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commitdiff
2015-09-02
gmungoc
JAL-1673 new test to verify transferRESNUMFeatures()
tree
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commitdiff
2015-09-02
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2015-09-01
Jim Procter
JAL-1853 add test to Functional group
tree
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commitdiff
2015-09-01
Jim Procter
JAL-1853 test origin of gapChar bug in AlignView method
tree
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commitdiff
2015-09-01
Jim Procter
JAL-1853 test demonstrating bug
tree
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commitdiff
2015-09-01
gmungoc
JAL-1672 additional assertions added
tree
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commitdiff
2015-08-27
gmungoc
JAL-1270 comments added regarding required remote service
tree
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commitdiff
2015-08-27
gmungoc
JAL-1830 tests relocated to AlignViewportTest after...
tree
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commitdiff
2015-08-27
gmungoc
JAL-1627 updated expected tooltip text in unit test
tree
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commitdiff
2015-08-27
gmungoc
JAL-1830 unit tests for removing (or not) mappings...
tree
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commitdiff
2015-08-27
gmungoc
JAL-1830 refactored so no jalview.gui references from...
tree
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commitdiff
2015-08-26
gmungoc
JAL-1830 dropped reference counts for mappings, instead...
tree
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commitdiff
2015-08-26
gmungoc
JAL-1270 test separated out of JalviewChimeraView
tree
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commitdiff
2015-08-26
gmungoc
JAL-1270 corrected path to test properties file
tree
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commitdiff
2015-08-26
gmungoc
JAL-1270 separated Jmol and Chimera tests to avoid...
tree
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commitdiff
2015-08-26
gmungoc
JAL-1759 updated unit test for removal of trim of Atom...
tree
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commitdiff
2015-08-20
gmungoc
JAL-1833 added unit tests (some failing) for wrapToolitp
tree
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commitdiff
2015-08-19
gmungoc
JAL-1742 suppress 'add chain' option for Jmol, pull...
tree
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commitdiff
2015-08-17
gmungoc
JAL-1800 separated SearchResults.getCharacters() from...
tree
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commitdiff
2015-08-17
gmungoc
JAL-1270 testIsMappable added
tree
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commitdiff
2015-08-17
gmungoc
JAL-1805 corrected javadoc only
tree
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commitdiff
2015-08-17
gmungoc
JAL-1829 JAL-1830 refactoring for correct mapping ...
tree
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commitdiff
2015-08-17
gmungoc
JAL-1800 SearchResults.equals() to allow smarter mouseo...
tree
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commitdiff
2015-08-14
tcofoegbu
JAL-1831 added changes to allow auto-generation of...
tree
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commitdiff
2015-08-07
tcofoegbu
JAL-1824 updated caching procedure for pdb entries...
tree
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commitdiff
2015-08-04
tcofoegbu
JAL-1816 fixed bug in identify file preventing it from...
tree
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commitdiff
2015-07-23
Jim Procter
Merge branch 'features/JAL-1759jmolUpdate' into develop
tree
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commitdiff
2015-07-23
tcofoegbu
Resolved merge conflict in EdtiCommandTest.java
tree
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commitdiff
2015-07-23
tcofoegbu
JAL-1805 modified test setup's so the are ran for group...
tree
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commitdiff
2015-07-23
tcofoegbu
JAL-1819 Test cases for Identify file
tree
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commitdiff
2015-07-22
Jim Procter
JAL-1805 add group spec to the BeforeMethod setup ...
tree
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commitdiff
2015-07-15
tcofoegbu
JAL-1769 updated test data
tree
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commitdiff
2015-07-09
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2015-07-09
tcofoegbu
JAL-1769 increased timeout period for eps generation
tree
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commitdiff
2015-07-09
tcofoegbu
JAL-1769 added test for commandline input operations
tree
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commitdiff
2015-07-08
gmungoc
JAL-1759 merge from develop
tree
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commitdiff
2015-07-08
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2015-07-08
gmungoc
JAL-1598 replaced faulty regex, amended Varna call...
tree
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commitdiff
2015-07-07
tcofoegbu
JAL-1805 test envirionment separation
tree
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commitdiff
2015-07-06
tcofoegbu
Merge branch 'features/1769_headless-mode-test' into...
tree
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commitdiff
2015-07-06
tcofoegbu
JAL-1769 fixed headless execution mode and created...
tree
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commitdiff
2015-07-06
gmungoc
JAL-1081 unit tests added
tree
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commitdiff
2015-07-06
gmungoc
JAL-1782 refactored test to ensure it passes in TestNG
tree
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commitdiff
2015-07-03
gmungoc
Merge branch 'develop' into features/JAL-892varnaToProject
tree
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commitdiff
2015-07-01
gmungoc
Merge branch 'develop' into features/JAL-1759jmolUpdate
tree
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commitdiff
2015-06-30
tcofoegbu
JAL-1641 round trip test/refactoring
tree
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commitdiff
2015-06-26
gmungoc
Merge branch 'develop' into features/JAL-892varnaToProject
tree
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commitdiff
2015-06-26
gmungoc
Merge branch 'develop' into features/JAL-1759jmolUpdate
tree
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commitdiff
2015-06-26
gmungoc
JAL-1759 updates for Jmol 14.2.14_25.06.11
tree
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commitdiff
2015-06-23
Jim Procter
JAL-1782 JAL-1780 JAL-653 JAL-1892 update patched refac...
tree
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commitdiff
2015-06-22
Jim Procter
JAL-1270 fix logic in stockholm test allowing annotatio...
tree
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commitdiff
2015-06-22
Jim Procter
JAL-653 JAL-1780 JAL-1140 added RNAML example alignment...
tree
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commitdiff
2015-06-22
Jim Procter
JAL-1780 JAL-653 Format/AppletFormat import and export...
tree
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commitdiff
2015-06-22
Jim Procter
JAL-653 JAL-1780 reorder imports
tree
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commitdiff
2015-06-19
tcofoegbu
JAL-1270 test suits import order refactor
features/JAL-1270_JUnit-to-TestNG
features/JAL-1782_JUnit-to-TestNG
tree
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commitdiff
2015-06-19
tcofoegbu
JAL-1270 JUnit to TestNG refactoring
tree
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commitdiff
2015-06-18
Jim Procter
JAL-653 patch broken test code - test still not passing
tree
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commitdiff
2015-06-18
gmungoc
JAL-1270 test added
tree
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commitdiff
2015-06-17
Jim Procter
Merge branch 'develop' into features/JAL-653_gffalignments
features/JAL-653_gffalignments
tree
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commitdiff
2015-06-15
Jim Procter
JAL-1665 patch for regression: failing jalview.ws.jabaw...
tree
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commitdiff
2015-06-15
Jim Procter
JAL-1775 test demonstrating bug
tree
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commitdiff
2015-06-15
Jim Procter
JAL-1775 fix broken test due to missing file (RF0031_un...
tree
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commitdiff
2015-06-07
Jim Procter
JAL-653 test for GFF file recognition and alignment...
tree
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commitdiff
2015-06-06
Jim Procter
JAL-653 test and testdata for importing GFF3 file with...
tree
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commitdiff
2015-06-06
Jim Procter
JAL-653 test for SequenceDummy methods
tree
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commitdiff
2015-06-05
tcofoegbu
Merge branch 'bug/JAL-1760_restore-hidden-seqs' into...
tree
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commitdiff
2015-06-05
tcofoegbu
JAL-1760 JAL-1641 Serialisation of Hidden Seqs and...
tree
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commitdiff
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