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JAL-2234 rename seqs for linked jalview examples
[jalview.git]
/
test
/
2016-10-05
Jim Procter
JAL-2189 apply license
tree
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commitdiff
2016-10-05
Jim Procter
JAL-2189 format tests
tree
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commitdiff
2016-10-05
Jim Procter
Revert "JAL-2245 Castor mapping and code changes for...
tree
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commitdiff
2016-10-04
gmungoc
Merge branch 'bug/JAL-2245enaXmlChange' into develop
tree
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commitdiff
2016-10-04
gmungoc
JAL-2245 Castor mapping and code changes for change...
bug/JAL-2245enaXmlChange
tree
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commitdiff
2016-10-04
gmungoc
JAL-2232 some fix / partial fix of failing tests
bug/JAL-2210_hack_for_Release_2_10
tree
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commitdiff
2016-10-04
gmungoc
JAL-2232 added test that failed before last fix, passes...
tree
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commitdiff
2016-10-03
gmungoc
JAL-2110 additional tests for setDatasetSequence, javad...
tree
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commitdiff
2016-10-02
Jim Procter
JAL-2210 first pass at attempting to fix CrossRef tests...
tree
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commitdiff
2016-10-01
Jim Procter
Merge branch 'develop' into bug/JAL-2210_ensembl_unipro...
tree
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commitdiff
2016-09-29
gmungoc
JAL-2237 apply default filter as sort in initial search
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2210 patch network test for additional refs
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2210 JAL-2235 fix deriveSequence test for tightened...
tree
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commitdiff
2016-09-28
Jim Procter
JAL-1270 read test props before manipulating config...
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2235 patch tests where self-reference was used...
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2235 implicit test to check that exception is raise...
tree
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commitdiff
2016-09-28
Jim Procter
JAL-2232 extract EMBLCDS refs from EMBL refs on Uniprot...
tree
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commitdiff
2016-09-27
gmungoc
JAL-2230 JAL-2049 added sequence feature transfer to
tree
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commitdiff
2016-09-22
gmungoc
JAL-1421 typed ResidueProperties.propHash; JAL-2176...
tree
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commitdiff
2016-09-21
Jim Procter
JAL-2214 test for strict Watson-Crick pairing
tree
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commitdiff
2016-09-20
gmungoc
JAL-1306 calculate Quality also when Conservation not...
tree
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commitdiff
2016-09-19
Jim Procter
JAL-2175 JAL-2170 fix sense for assertEquals
tree
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commitdiff
2016-09-19
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2016-09-19
gmungoc
JAL-2172 test and code updates for readonly selection...
tree
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commitdiff
2016-09-19
tcofoegbu
merge
tree
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commitdiff
2016-09-19
gmungoc
JAL-1353 small tidy of test
tree
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commitdiff
2016-09-19
gmungoc
JAL-1270 use test properties file
tree
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commitdiff
2016-09-16
Jim Procter
Merge branch 'patch/JAL-2164_updatesRESNUMtests' into...
tree
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commitdiff
2016-09-16
gmungoc
JAL-2157 JAL-1803 refactored Sequence.updatePDBIds...
tree
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commitdiff
2016-09-16
Jim Procter
JAL-2164 update asserts for padded residue numbers...
tree
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commitdiff
2016-09-16
gmungoc
JAL-2164 removed unused parameters from JmolParser...
tree
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commitdiff
2016-09-16
gmungoc
JAL-1270 JAL-1919 ensure Temp Factor is OFF for test...
tree
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commitdiff
2016-09-13
tcofoegbu
Revert "JAL-2164 JAL-1919 disabled and removed PDB...
tree
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commitdiff
2016-09-13
gmungoc
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2016-09-13
gmungoc
JAL-1803 tests added for PDBEntry.Type
tree
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commitdiff
2016-09-13
tcofoegbu
JAL-2164 JAL-1919 disabled and removed PDB file parser...
tree
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commitdiff
2016-09-13
gmungoc
JAL-1803 extracted class ChainId to jalview.util.CaseIn...
tree
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commitdiff
2016-09-09
tcofoegbu
merge
tree
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commitdiff
2016-09-08
tcofoegbu
JAL-2164 renamed 'DEFAULT_STRUCTURE_FORMAT' property...
tree
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commitdiff
2016-09-07
Jim Procter
Merge branch 'develop' into bug/JAL-1803_JAL-2157
tree
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commitdiff
2016-09-07
Jim Procter
JAL-2192 TODO
tree
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commitdiff
2016-09-07
Jim Procter
JAL-2191 comments re chimera view code redundancy and...
tree
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commitdiff
2016-09-07
Jim Procter
JAL-1803 switched so ‘expected’ is constant in assert
tree
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commitdiff
2016-09-07
gmungoc
JAL-2164 fix failing test
tree
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commitdiff
2016-09-06
gmungoc
JAL-2106 DBRefEntry.isPrimary() renamed isPrimaryCandid...
tree
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commitdiff
2016-09-06
gmungoc
JAL-2147 additional test coverage for findMappingsForSe...
tree
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commitdiff
2016-09-05
gmungoc
JAL-2106 increased coverage for testGetPrimaryDbRefs
tree
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commitdiff
2016-09-05
gmungoc
JAL-2106 corrections to DBRefEntry.isPrimary code and...
tree
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commitdiff
2016-09-04
Jim Procter
JAL-1803 JAL-2106 patch tests for tighter PDB Primary...
tree
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commitdiff
2016-09-04
Jim Procter
JAL-1803 patch test: PDBEntry.getFile() will always...
tree
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commitdiff
2016-09-01
gmungoc
JAL-2077 don't mess with the look and feel
tree
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commitdiff
2016-09-01
gmungoc
JAL-2077 less drastic exit on close
tree
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commitdiff
2016-09-01
gmungoc
JAL-2077 test harness for inspecting mouse events
tree
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commitdiff
2016-09-01
gmungoc
JAL-1421 add generics to NJTree, refactor recursive...
tree
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commitdiff
2016-08-30
Jim Procter
JAL-2154 doc & AssertError trap for known failure case...
tree
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commitdiff
2016-08-30
Jim Procter
JAL-2154 javadoc, fix underloaded version of assertData...
tree
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commitdiff
2016-08-30
Jim Procter
Merge branch 'develop' into merge/develop_bug/JAL-2154p...
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 endless loop fixed (hopefully :) )
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 catch insertion of duplicate CDS after retriev...
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 Optional message parameter for assertDatasetNo...
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 new assertDatasetIsNormalised to trivially...
tree
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commitdiff
2016-08-29
Jim Procter
JAL-2154 additional test that removing a duplicate...
tree
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commitdiff
2016-08-29
gmungoc
Merge branch 'bug/JAL-1841rnaSecStr' into develop
tree
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commitdiff
2016-08-29
gmungoc
JAL-1448 updated unit test for last change
tree
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commitdiff
2016-08-29
gmungoc
JAL-1841 robustness fix
bug/JAL-1841rnaSecStr
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 patch regression on DbRefFetcher due to PDB...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 ENSEMBL and Uniprot tests
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 report any db fetch failures as a fail at end
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 ensure pass increments actually result in...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 catch and report a failures when xrefed projec...
tree
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commitdiff
2016-08-26
gmungoc
Merge branch 'develop' into bug/JAL-1841rnaSecStr
tree
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commitdiff
2016-08-26
gmungoc
JAL-2049 set Ensembl variant source to ENSEMBL if ...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 Defer failing cross-ref combinations that...
tree
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commitdiff
2016-08-26
Jim Procter
JAL-2154 check that CDS panel is only nucleotide, and...
tree
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commitdiff
2016-08-25
Jim Procter
JAL-2106 JAL-2154 fix test for additional reference...
tree
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commitdiff
2016-08-25
Jim Procter
JAL-2106 JAL-2154 cross-refs from Ensembl should verify...
tree
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commitdiff
2016-08-25
Jim Procter
JAL-2106 tighten DBRefEntry primary seq test for PDB
tree
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commitdiff
2016-08-25
Jim Procter
Merge branch 'trailm' into trial_fixMakeCDSDBRefPropagation
tree
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commitdiff
2016-08-25
Jim Procter
Merge branch 'refactor/JAL-2106_sourceDbRef_revision...
tree
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commitdiff
2016-08-25
Jim Procter
Merge branch 'develop' into refactor/JAL-2106_sourceDbR...
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 FIXME for test failure
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 TODO - verify Embl primary refs get added
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 removed setSourceDBRef, refactor getSourceDBRe...
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 stricter check for 1:1 mapping (same numbering...
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 rejig test to minimally verify patch that...
tree
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commitdiff
2016-08-24
Jim Procter
JAL-2106 DBRefEntry.isPrimary() minimal test & implemen...
tree
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commitdiff
2016-08-23
Jim Procter
JAL-2154 updated testMakeCDSAlignment for expected...
tree
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commitdiff
2016-08-23
Jim Procter
Merge branch 'develop' into bug/JAL-2154projectMappings
tree
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commitdiff
2016-08-23
gmungoc
JAL-2174 markColumns() refactored inside ColumnSelection
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 - rejig test pass code for breadth-first ...
tree
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commitdiff
2016-08-22
gmungoc
JAL-2175 code tidying
tree
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commitdiff
2016-08-22
gmungoc
JAL-2175 code/test fixes/tidy for PFAM/MSF/JSON roundtrip
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 always check dataset sequence for sequence...
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 patch verifyAlignment so it fails for duplicat...
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 tidy assert messages and fix test to verify...
tree
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commitdiff
2016-08-22
Jim Procter
JAL-2154 test that verifyAlignment fails for duplicate...
tree
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commitdiff
2016-08-22
gmungoc
JAL-2011 adjust method to fix failing unit test
tree
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commitdiff
2016-08-19
gmungoc
JAL-2174 bug fixes + refactoring to allow + unit tests
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 major rejigging of test looping again
tree
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commitdiff
2016-08-19
Jim Procter
JAL-2154 disable DAS sources for Jalview2XML tests
tree
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commitdiff
next