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JAL-4059 Revert libjs/MiGLayout as new miglayout transpile of 4.0 includes reference...
[jalview.git] / test /
2023-02-23 James ProcterJAL-4134 group columns using a tree cut - seems to... tree | commitdiff
2023-02-23 Ben SoaresJAL-629 Add debug messages for more failing tests tree | commitdiff
2023-02-23 James ProcterJAL-4134 - brutal hack to build a tree clustering colum... tree | commitdiff
2023-02-23 Ben SoaresJAL-629 fixed a Log4j test by adding --debug arg tree | commitdiff
2023-02-23 James ProcterJAL-4134 - refactor tree calculation code to work with... tree | commitdiff
2023-02-22 James ProcterJAL-3858 persist PAE matrix (only so far) as serialised... tree | commitdiff
2023-02-22 James ProcterJAL-1551 source formatting tree | commitdiff
2023-02-22 James ProcterJAL-3858 simple test for PAE matrix recovery tree | commitdiff
2023-02-22 James ProcterJAL-4027 JAL-3858 rename CUSTOM_RENDERER to CONTACT_MAT... tree | commitdiff
2023-02-16 James ProcterJAL-1713 don’t close an automatically created overview... tree | commitdiff
2023-02-15 James ProcterMerge branch 'develop' into feature/JAL-1713_overviewIn... tree | commitdiff
2023-02-15 James ProcterPassing test for JAL-4127 failing on the JAL-1713 branch tree | commitdiff
2023-02-13 James ProcterMerge branch 'develop' into feature/JAL-1713_overviewIn... tree | commitdiff
2023-02-10 James ProcterJAL-3077 broken conflict resolve resulted in failing... tree | commitdiff
2023-02-10 James ProcterJAL-4126 comment out closeAll - so we can visually... tree | commitdiff
2023-02-10 James ProcterJAL-4126 failing test - colour scheme appears to be... tree | commitdiff
2023-02-03 James ProcterMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2023-02-02 James ProcterJAL-4119 JAL-2144 ‘invalid’ DBRefEntry has a null versi... patch/JAL-4119_sifts_ftp_split tree | commitdiff
2023-02-02 James ProcterJAL-4119 use split_xml directories rather than the... tree | commitdiff
2023-01-31 James ProcterJAL-1713 update from Jalview 2.11.3 develop tree | commitdiff
2023-01-26 Ben SoaresJAL-4118 remove unnecessary sleep from QuitHandlerTest tree | commitdiff
2023-01-26 Ben SoaresJAL-1988 Add a sleep to file save test to give time... tree | commitdiff
2023-01-25 James ProcterMerge branch 'new_feature/JAL-4019_ambiguous_base_colou... tree | commitdiff
2023-01-24 James ProcterMerge branch 'merge/JAL-1988_JAL-3772+JAL-3416+JAL... tree | commitdiff
2023-01-24 James ProcterMerge branch 'develop' (JAL-4102 2.11.2.6 patch release... features/r2_11_2_alphafold/JAL-2349_JAL-3855 tree | commitdiff
2023-01-20 Jim ProcterMerge branch 'patch/JAL-4114_updated_3dbeacons_api... tree | commitdiff
2023-01-20 Jim ProcterMerge branch 'patch/Release_2_11_2_6_Branch' into develop tree | commitdiff
2023-01-20 Jim ProcterJAL-2353 primary ref candidates that should be promoted... patch/Release_2_11_2_6_Branch tree | commitdiff
2023-01-20 Jim ProcterJAL-4114 missing mock server response tree | commitdiff
2023-01-20 Jim ProcterJAL-4114 updated mock tests and responses for v2.0 api tree | commitdiff
2023-01-17 Ben SoaresMerge branch 'develop' into merge/JAL-1988_JAL-3772... tree | commitdiff
2022-11-30 Ben SoaresJAL-4101 Updated Rfam* tests tree | commitdiff
2022-11-30 Jim ProcterJAL-2353 patch for Ensembl refs from uniprot - needs... tree | commitdiff
2022-11-29 Ben SoaresJAL-4101 Updated Rfam* tests tree | commitdiff
2022-11-14 Ben SoaresJAL-4019 Put original test back tree | commitdiff
2022-11-13 Ben SoaresJAL-4019 Added tests for new Nucleotide sequence detection tree | commitdiff
2022-11-09 Ben SoaresJAL-1988 JAL-3772 Test for FORCE_QUIT whilst saving... bug/JAL-1988_JAL-3772_improved_quit_handling tree | commitdiff
2022-11-08 Ben SoaresJAL-1988 JAL-3772 Tests for various quitting scenarios tree | commitdiff
2022-10-30 Jim ProcterJAL-2353 patch for Ensembl refs from uniprot - needs... tree | commitdiff
2022-10-29 Jim ProcterMerge branch 'features/JAL-4061_and_JAL-4062_findselect... tree | commitdiff
2022-10-26 Ben SoaresMerge branch 'features/r2_11_2_alphafold/JAL-2349_JAL... tree | commitdiff
2022-10-26 Ben SoaresJAL-3416 (and others) increasing number of STDERR lines... tree | commitdiff
2022-10-21 Jim ProcterJAL-2349 JAL-3855 fix failing tests tree | commitdiff
2022-10-20 Jim ProcterJAL-2349 formatting/pick correct exception tree | commitdiff
2022-10-20 Jim ProcterJAL-2349 JAL-3855 ContactListI.getPosition() to recover... tree | commitdiff
2022-10-20 Jim ProcterJAL-2349 JAL-3855 experimenting with filtering columns... tree | commitdiff
2022-10-17 Jim ProcterJAL-2349 JAL-3855 tests that probably should be part... tree | commitdiff
2022-10-17 Jim ProcterJAL-2349 JAL-3855 Integrate pAE retrieval in StructureF... tree | commitdiff
2022-10-14 Jim ProcterMerge branch 'features/JAL-3895_alphafoldcolours' into... tree | commitdiff
2022-10-11 Jim ProcterJAL-4073 update tests tree | commitdiff
2022-10-06 Jim ProcterJAL-1551 formatting tree | commitdiff
2022-10-06 Jim ProcterJAL-4073 Pfam retrieval now works via a template includ... tree | commitdiff
2022-09-15 Jim ProcterJAL-4061 support incremental search of features tree | commitdiff
2022-09-15 Jim ProcterJAL-4061 tests, bugfixes and TODOs for matching feature... tree | commitdiff
2022-09-15 Jim ProcterJAL-4062 avc operation and model method for copying... tree | commitdiff
2022-09-15 Jim ProcterMerge branch 'develop' into features/JAL-4061_and_JAL... tree | commitdiff
2022-09-14 Jim ProcterMerge branch 'bug/JAL-3612_overviewFeatureOrdering... tree | commitdiff
2022-09-14 Jim ProcterJAL-4061 JAL-4062 Find can now search features tree | commitdiff
2022-06-24 Jim ProcterJAL-2349 TODO for tests tree | commitdiff
2022-06-24 Jim ProcterJAL-2349 JAL-3855 formatting tree | commitdiff
2022-06-10 Jim ProcterMerge branch 'features/r2_11_2_alphafold/JAL-2349_JAL... tree | commitdiff
2022-06-09 Jim ProcterMerge branch 'bug/JAL-4020_add_pymolwin_paths' into... tree | commitdiff
2022-06-09 Jim ProcterJAL-4026 increase timeouts for command line ops tree | commitdiff
2022-06-09 Jim ProcterJAL-4026 always wait 50ms before checking if the calcul... tree | commitdiff
2022-06-06 Ben SoaresJAL-4020 updated tests tree | commitdiff
2022-04-16 Jim ProcterJAL-3365 expand range of allowed DSSP secondary structu... tree | commitdiff
2022-04-05 Jim ProcterJAL-3981 patch tests and remove errant imports tree | commitdiff
2022-04-05 Jim ProcterJAL-3990 gradle spotlessApply tree | commitdiff
2022-03-31 Jim ProcterJAL-3085 update tests and mock responses, new P0dtd1... tree | commitdiff
2022-03-30 Jim ProcterJAL-3976 fix mock PDBFTS query & responses patch/JAL-3976_3dbeaconsnull tree | commitdiff
2022-03-23 Jim ProcterJAL-3976 update tests tree | commitdiff
2022-03-08 Jim ProcterJAL-3746 apply copyright to tests spike/try_spotless_JAL-3438 tree | commitdiff
2022-03-08 Jim ProcterJAL-3438 spotless for 2.11.2.0 tree | commitdiff
2022-03-08 Jim ProcterJAL-3108 updated Ensembl client and model species names tree | commitdiff
2022-02-17 Jim ProcterJAL-3551 patch superpose test for additional undo dis... tree | commitdiff
2022-02-16 Jim ProcterMerge branch 'develop' into features/r2_11_2_alphafold... tree | commitdiff
2022-02-15 Jim ProcterJAL-1761 backbone type parameter for configuring which... tree | commitdiff
2022-02-15 Jim ProcterJAL-1761 need to pass molecule type when generating... tree | commitdiff
2022-02-15 Jim ProcterJAL-3551 patch test for altloc handling atom spec in... tree | commitdiff
2022-02-14 Jim ProcterJAL-3956 - PDBEntry objects constructed from 3D-Beacons... tree | commitdiff
2022-02-12 Jim ProcterMerge branch 'update/JAL-3949_jalview_bin_Console_to_cu... tree | commitdiff
2022-02-12 Ben SoaresJAL-3949 fix testProps path and make line count more... update/JAL-3949_jalview_bin_Console_to_cure_sanity_even_more tree | commitdiff
2022-02-11 Jim ProcterJAL-3949 increase command line ops test timeout tree | commitdiff
2022-02-11 Jim ProcterJAL-3949 ensure Jalview command line ops setup actually... tree | commitdiff
2022-02-11 Jim ProcterJAL-3949 - refactor logging from jalview.bin.Cache... tree | commitdiff
2022-02-11 Ben SoaresJAL-3949 fixed failing commandlinetests due to more... tree | commitdiff
2022-02-11 Ben SoaresMerge branch 'develop' into update/JAL-3949_abstracted_... tree | commitdiff
2022-02-11 Ben SoaresJAL-3949 Complete new abstracted logging framework... tree | commitdiff
2022-02-07 Jim ProcterMerge branch 'feature/JAL-1713_overviewInProject' into... tree | commitdiff
2022-02-07 Jim ProcterJAL-3785 JAL- Merge branch 'bug/JAL-3785autoOverviewTit... bug/JAL-3785autoOverviewTitle tree | commitdiff
2022-02-04 Jim ProcterMerge branch 'bug/JAL-3806_mappingCoversSequence_for211... bug/JAL-3806_without_shared_DS_for_2_11_2 tree | commitdiff
2022-02-04 Jim ProcterJAL-3806 JAL-3725 update tests since CDS mappings now... tree | commitdiff
2022-02-03 Jim ProcterJAL-2305 comments re testFindXrefSequences_withFetch... tree | commitdiff
2022-01-28 Jim ProcterJAL-3137 tests are for linux only tree | commitdiff
2022-01-28 Jim ProcterMerge branch 'merge/develop_JAL-3725' into develop tree | commitdiff
2022-01-26 Jim ProcterJAL-3763 (for whatever reason) need to increase timeout... tree | commitdiff
2022-01-26 Jim ProcterJAL-3763 (for whatever reason) need to increase timeout... merge/develop_task/JAL-3763_newDatasetForCds tree | commitdiff
2022-01-26 Jim ProcterMerge branch 'task/JAL-3763_newDatasetForCds' into... tree | commitdiff
2022-01-26 Jim ProcterJAL-3806 JAL-3725 propagate relaxed criteria for stop... tree | commitdiff
2022-01-26 gmungocJAL-3725 restrict mapped virtual feature location to... tree | commitdiff
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