JAL-3141 forgot to add this file after extracting the class!
[jalview.git] / test /
2018-01-30 kiramtJAL-2759 Additional tests and tweaks to numColumns...
2018-01-30 kiramtJAL-2759 Keep numColumns up to date
2018-01-29 kiramtMerge branch 'feature/JAL-2759' of https://source.jalvi...
2018-01-29 kiramtJAL-2759 Combine findRegionForColumn code in HiddenColu...
2018-01-29 gmungocJAL-1270 testPadGaps() added
2018-01-29 kiramtJAL-2759 make a new cursor instead of resetting, update...
2018-01-26 Jim ProcterMerge branch 'releases/Release_2_10_3_Branch' into...
2018-01-26 gmungocMerge branch 'develop' into features/JAL-1793VCF
2018-01-22 kiramtJAL-2579 Moved locateVisibleStartOfSequence to Sequence...
2018-01-19 kiramtJAL-2759 Changes to getVisibleSequenceStrings after...
2018-01-19 kiramtJAL-2759 Moved propagateInsertions out of HiddenColumns
2018-01-19 kiramtJAL-2759 Update to getVisibleStartAndEndIndex after...
2018-01-18 kiramtJAL-2759 change subtractVisibleColumns and removal...
2018-01-18 kiramtJAL-2759 Updated test
2018-01-18 kiramtJAL-2759 unit tests (incomplete)
2018-01-17 gmungocJAL-2679 case-insensitive comparison of query and retri...
2018-01-16 kiramtJAL-2759 setup hideBitSet over range for hideInsertions
2018-01-16 gmungocJAL-2885 uniprot now https, uniprot/ensembl/pfam/xfam...
2018-01-16 kiramtJAL-2759 Unit test for PopupMenu hideInsertions code
2018-01-16 kiramtJAL-2759 Moved alignment annotation code out of HiddenC...
2018-01-15 kiramtJAL-2759 Rename hideInsertionsFor to hideList, after...
2018-01-15 kiramtJAL-2759 Refactor of hideInsertionsFor after review
2018-01-15 kiramtJAL-2759 Minor doc and naming changes
2018-01-15 kiramtJAL-2759 Rename findColumnPosition and adjustForHiddenC...
2018-01-15 kiramtJAL-2759 Comments and renaming for has(Many)HiddenColum...
2018-01-15 kiramtJAL-2759 Tidy up javadoc and naming in HiddenColumnsCur...
2018-01-15 kiramtJAL-2759 Updated HiddenColumnsTest::testIsVisible follo...
2018-01-15 kiramtJAL-2759 Update to getHiddenBoundaryRight + unit test...
2018-01-12 kiramtJAL-2886 trivial unit test fix
2018-01-10 gmungocJAL-1793 update spike branch to latest
2018-01-10 gmungocJAL-2791 ignore feature type visibility in getColor()
2018-01-09 gmungocJAL-2843 test roundtrip of feature colours and filters...
2018-01-09 gmungocJAL-2843 unit tests for writing filters to Jalview...
2018-01-09 gmungocJAL-2843 unit tests for Save/Load colours and filters...
2018-01-09 gmungocJAL-2808 small tweaks to api / Javadoc
2017-12-19 Jim ProcterJAL-2880 disabled non-functional test - Jmol parser...
2017-12-13 gmungocJAL-2843 add isByAttribute to interface for convenience
2017-12-11 gmungocJAL-2843 add colour by attribute, and no value colour...
2017-12-08 gmungocJAL-2843 read/write feature filters from/to Jalview...
2017-12-08 gmungocJAL-2843 toStableString, fromString for Jalview feature...
2017-12-05 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-12-04 gmungocJAL-2808 JAL-2850 update spike build to latest
2017-12-04 gmungocMerge branch 'spikes/mungo' into features/JAL-1793VCF
2017-12-04 gmungocJAL-2850 JAL-1766 option to load contig sequence refere...
2017-12-04 gmungocJAL-2845 locate reverse strand insertion as complement...
2017-12-01 gmungocJAL-2835 spike updated to latest (use specific SO term...
2017-12-01 Jim ProcterMerge branch 'develop' into bugs/JAL-2780_JAL-2781_pdbn...
2017-12-01 gmungocJAL-2835 additional sub-terms of sequence_variant added
2017-11-30 gmungocJAL-1766 additional tests for stub htsjdk wrapper
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2859_uniprottowrongpdbid' into...
2017-11-28 Jim ProcterMerge branch 'bug/JAL-2740' into develop
2017-11-28 gmungocJAL-2850 MapList.isToForwardStrand added
2017-11-27 Jim ProcterJAL-2859 failing test demonstrating sequences with...
2017-11-24 gmungocJAL-2808 update spike to latest
2017-11-24 gmungocJAL-2808 refine FeatureMatcher interface and matcher...
2017-11-23 gmungocJAL-2808 update spike to latest (filter range tooltip...
2017-11-23 gmungocJAL-2808 refactor KeyedMatcher as FeatureMatcher with...
2017-11-23 gmungocJAL-2808 update spike to latest (filter range, Present...
2017-11-23 gmungocJAL-2808 added conditions Present, NotPresent as options
2017-11-23 gmungocJAL-2808 pass FeatureSettings to controller as array...
2017-11-22 gmungocJAL-2069 spike updated with latest (FeatureTypeSettings)
2017-11-22 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-22 kiramtJAL-2759 performance improvements to hideColumns
2017-11-22 gmungocJAL-2808 capture feature attributes datatype (Character...
2017-11-22 kiramtJAL-2759 HiddenColumns test polishing
2017-11-21 kiramtJAL-2759 corrected old getVisibleBlocksIterator calls...
2017-11-21 kiramtJAL-2759 Remove getVisibleBlocksIterator call
2017-11-21 kiramtMerge branch 'develop' into feature/JAL-2759
2017-11-21 kiramtJAL-2759 BoundedStartRegionIterator test
2017-11-21 kiramtJAL-2759 unit tests for VisibleContigsIterator
2017-11-20 kiramtJAL-2759 improvements to speed up synchronisation;...
2017-11-17 Jim ProcterMerge branch 'bug/JAL-2831' into develop
2017-11-17 kiramtJAL-2759 tidy
2017-11-17 kiramtJAL-2759 Update tests
2017-11-17 kiramtJAL-2759 Convert reveal to use cursor
2017-11-17 kiramtJAL-2759 HiddenColumnsCursor tests
2017-11-16 Jim ProcterMerge branch 'bug/JAL-2829deleteCharsWithGaps' into...
2017-11-16 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-16 gmungocJAL-2816 JAL-2835 additional tests to include colour...
2017-11-16 gmungocJAL-2835 update test for array-valued attribute name
2017-11-16 gmungocJAL-2835 update test for CSQ data held as a Map
2017-11-16 gmungocJAL-2835 test updated for colour by 'nested attribute'
2017-11-16 gmungocJAL-2816 tests for findFeaturesAtColumn
2017-11-15 gmungocJAL-2816 exclude filtered / thresholded out features...
2017-11-15 gmungocJAL-2835 spike updated with latest
2017-11-15 gmungocJAL-2835 support filter/colour by nested attribute...
2017-11-15 gmungocJAL- 2835 support filter on nested attribute keys
2017-11-15 gmungocJAL-1270 add missing "Functional" to tests
2017-11-14 kiramtJAL-2831 tidies and tests
2017-11-14 Jim ProcterJAL-2758 update uniprot retrieval test
2017-11-14 kiramtMerge branch 'imp/JAL-2774' into bug/JAL-2831
2017-11-13 Jim ProcterMerge branch 'features/JAL-2758_shorteruniprot' into...
2017-11-13 gmungocMerge branch 'develop' into features/JAL-1793VCF
2017-11-13 kiramtJAL-2759 convert findColumnPosition to use cursor
2017-11-10 gmungocJAL-2829 fixes and unit tests bug/JAL-2829deleteCharsWithGaps
2017-11-10 gmungocJAL-2829 unit tests for failing cases
2017-11-08 kiramtMerge branch 'develop' into feature/JAL-2759
2017-11-08 Jim ProcterMerge branch 'develop' into bug/JAL-2225mapMultipleChains
2017-11-07 gmungocJAL-2069 update spike with latest
2017-11-07 gmungocJAL-2069 corrected overloaded constructor behaviour
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