JAL-2309 Made test timeout slightly longer
[jalview.git] / test /
2016-09-07 Jim ProcterJAL-2192 TODO
2016-09-07 Jim ProcterJAL-2191 comments re chimera view code redundancy and...
2016-09-07 Jim ProcterJAL-1803 switched so ‘expected’ is constant in assert
2016-09-07 gmungocJAL-2164 fix failing test
2016-09-06 gmungocJAL-2106 DBRefEntry.isPrimary() renamed isPrimaryCandid...
2016-09-06 gmungocJAL-2147 additional test coverage for findMappingsForSe...
2016-09-05 gmungocJAL-2106 increased coverage for testGetPrimaryDbRefs
2016-09-05 gmungocJAL-2106 corrections to DBRefEntry.isPrimary code and...
2016-09-04 Jim ProcterJAL-1803 JAL-2106 patch tests for tighter PDB Primary...
2016-09-04 Jim ProcterJAL-1803 patch test: PDBEntry.getFile() will always...
2016-09-01 gmungocJAL-2077 don't mess with the look and feel
2016-09-01 gmungocJAL-2077 less drastic exit on close
2016-09-01 gmungocJAL-2077 test harness for inspecting mouse events
2016-09-01 gmungocJAL-1421 add generics to NJTree, refactor recursive...
2016-08-30 Jim ProcterJAL-2154 doc & AssertError trap for known failure case...
2016-08-30 Jim ProcterJAL-2154 javadoc, fix underloaded version of assertData...
2016-08-30 Jim ProcterMerge branch 'develop' into merge/develop_bug/JAL-2154p...
2016-08-29 Jim ProcterJAL-2154 endless loop fixed (hopefully :) )
2016-08-29 Jim ProcterJAL-2154 catch insertion of duplicate CDS after retriev...
2016-08-29 Jim ProcterJAL-2154 Optional message parameter for assertDatasetNo...
2016-08-29 Jim ProcterJAL-2154 new assertDatasetIsNormalised to trivially...
2016-08-29 Jim ProcterJAL-2154 additional test that removing a duplicate...
2016-08-29 gmungocMerge branch 'bug/JAL-1841rnaSecStr' into develop
2016-08-29 gmungocJAL-1448 updated unit test for last change
2016-08-29 gmungocJAL-1841 robustness fix bug/JAL-1841rnaSecStr
2016-08-26 Jim ProcterJAL-2154 patch regression on DbRefFetcher due to PDB...
2016-08-26 Jim ProcterJAL-2154 ENSEMBL and Uniprot tests
2016-08-26 Jim ProcterJAL-2154 report any db fetch failures as a fail at end
2016-08-26 Jim ProcterJAL-2154 ensure pass increments actually result in...
2016-08-26 Jim ProcterJAL-2154 catch and report a failures when xrefed projec...
2016-08-26 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-26 gmungocJAL-2049 set Ensembl variant source to ENSEMBL if ...
2016-08-26 Jim ProcterJAL-2154 Defer failing cross-ref combinations that...
2016-08-26 Jim ProcterJAL-2154 check that CDS panel is only nucleotide, and...
2016-08-25 Jim ProcterJAL-2106 JAL-2154 fix test for additional reference...
2016-08-25 Jim ProcterJAL-2106 JAL-2154 cross-refs from Ensembl should verify...
2016-08-25 Jim ProcterJAL-2106 tighten DBRefEntry primary seq test for PDB
2016-08-25 Jim ProcterMerge branch 'trailm' into trial_fixMakeCDSDBRefPropagation
2016-08-25 Jim ProcterMerge branch 'refactor/JAL-2106_sourceDbRef_revision...
2016-08-25 Jim ProcterMerge branch 'develop' into refactor/JAL-2106_sourceDbR...
2016-08-24 Jim ProcterJAL-2106 FIXME for test failure
2016-08-24 Jim ProcterJAL-2106 TODO - verify Embl primary refs get added
2016-08-24 Jim ProcterJAL-2106 removed setSourceDBRef, refactor getSourceDBRe...
2016-08-24 Jim ProcterJAL-2106 stricter check for 1:1 mapping (same numbering...
2016-08-24 Jim ProcterJAL-2106 rejig test to minimally verify patch that...
2016-08-24 Jim ProcterJAL-2106 DBRefEntry.isPrimary() minimal test & implemen...
2016-08-23 Jim ProcterJAL-2154 updated testMakeCDSAlignment for expected...
2016-08-23 Jim ProcterMerge branch 'develop' into bug/JAL-2154projectMappings
2016-08-23 gmungocJAL-2174 markColumns() refactored inside ColumnSelection
2016-08-22 Jim ProcterJAL-2154 - rejig test pass code for breadth-first ...
2016-08-22 gmungocJAL-2175 code tidying
2016-08-22 gmungocJAL-2175 code/test fixes/tidy for PFAM/MSF/JSON roundtrip
2016-08-22 Jim ProcterJAL-2154 always check dataset sequence for sequence...
2016-08-22 Jim ProcterJAL-2154 patch verifyAlignment so it fails for duplicat...
2016-08-22 Jim ProcterJAL-2154 tidy assert messages and fix test to verify...
2016-08-22 Jim ProcterJAL-2154 test that verifyAlignment fails for duplicate...
2016-08-22 gmungocJAL-2011 adjust method to fix failing unit test
2016-08-19 gmungocJAL-2174 bug fixes + refactoring to allow + unit tests
2016-08-19 Jim ProcterJAL-2154 major rejigging of test looping again
2016-08-19 Jim ProcterJAL-2154 disable DAS sources for Jalview2XML tests
2016-08-19 tcofoegbuMerge branch 'develop' of https://source.jalview.org...
2016-08-19 tcofoegbuJAL-1803 unit test for PDB chainCode save/restore from...
2016-08-19 Jim ProcterJAL-2154 fix looping structure so for a particular...
2016-08-19 Jim ProcterJAL-2154 drop unused hashes
2016-08-19 Jim ProcterJAL-2154 testNG like assertAlignmentDatasetRefs static...
2016-08-19 Jim ProcterJAL-2154 use right reference string for recovering...
2016-08-18 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-18 gmungocJAL-2001 return copy of selection in getSelected()
2016-08-17 gmungocJAL-2172 reverted to not sorting column selection
2016-08-17 gmungocJAL-2172 handle case where column selection is not...
2016-08-16 Jim ProcterJAL-2154 verify sequenceI/dataset refs for codonmappings
2016-08-16 Jim ProcterJAL-2154 check alignment isn’t null before validating
2016-08-16 Jim ProcterJAL-2154 [test] verify reference integrity for alignmen...
2016-08-16 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-16 gmungocJAL-2172 unit test added
2016-08-16 gmungocJAL-2171 matching bracket default character for rna...
2016-08-16 Jim ProcterJAL-2154 formatting
2016-08-16 Jim ProcterJAL-2154 new assert to check reference integrity for...
2016-08-16 Jim ProcterJAL-2154 xref test harness - test fails if there are...
2016-08-16 gmungocMerge branch 'develop' into bug/JAL-1841rnaSecStr
2016-08-15 tcofoegbuJAL-1919 Added improvement to ensure consistence of...
2016-08-13 Jim ProcterJAL-2154 refactor CrossRef UI code to its own class
2016-08-13 Jim ProcterJAL-2154 check if the desktop is constructed before...
2016-08-12 gmungocJAL-1841, bug fix in rna SS consensus, additions to...
2016-08-11 Jim ProcterJAL-2154 clear the desktop before every 2xml test
2016-08-11 Jim ProcterJAL-2154 refactor setup/teardown from Jalview2xml for...
2016-08-05 gmungocJAL-1448 always use UK locale for formatted date properties
2016-08-04 Jim ProcterJAL-2154 make sure all sequences referenced via DBRefEn...
2016-08-04 Jim ProcterJAL-2110 comment on failing test (consider skipping...
2016-08-04 gmungocJAL-2164 changed to be Java 1.7 compliant
2016-08-01 Jim ProcterJAL-2164 TODO: make test pass for JMOL_PARSER
2016-08-01 Jim ProcterJAL-2164 JAL-1919 JAL-1270 use structure import setting...
2016-08-01 Jim ProcterJAL-2164 prevent jalview news from opening task/JAL-2164_mcviewforoldjalviewprojects
2016-08-01 Jim ProcterJAL-2164 clear the desktop before testStoreAndRecoverEx...
2016-08-01 Jim ProcterJAL-1772 make sure we actually return reference to...
2016-07-29 Jim ProcterJAL-1772 JAL-2164 make expanded view save/restore test...
2016-07-29 Jim ProcterJAL-2164 revert tests depending on import of legacy...
2016-07-29 tcofoegbuJAL-2157 fixed Jalview2xmlTest
2016-07-27 tcofoegbuJAL-1919 added codes for End-2-End scan for sequence...
2016-07-21 tcofoegbuResolve merge conflict for StructureImportSettings
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