jalview.git
2006-11-20 amwaterhousecheck cursor is visible for hidden cols
2006-11-20 amwaterhouselook for current alignframe to search
2006-11-20 amwaterhouseembeddedMenus
2006-11-20 amwaterhouseMemory check on PDB file
2006-11-20 amwaterhouseuse Shift for paste to new window
2006-11-20 amwaterhouseMust copy old dbrefs
2006-11-15 amwaterhouseMust be able to find originating alignment modified
2006-11-15 amwaterhousedont adjust aligments if they're the same size
2006-11-15 amwaterhouseAdd remove seq from multiple views, must fire alignment...
2006-11-15 amwaterhouseCheck if groupWidth is greater than sequence width
2006-11-15 amwaterhouseIdMask must be Max seq end, not seq width
2006-11-15 amwaterhouseright align ids
2006-11-15 amwaterhouseRIght align seq ids
2006-11-14 amwaterhouseminimize and raise associated windows
2006-11-14 amwaterhouseClose all added
2006-11-14 amwaterhouseselect menu
2006-11-14 amwaterhousePaintrefresh alignpanel
2006-11-14 amwaterhouseset seqColours null
2006-11-14 amwaterhouserecalc cons for group size change
2006-11-14 amwaterhouseCommands, history, consensus, refresh updated
2006-11-14 amwaterhousePaste uses alt rather than shift
2006-11-14 amwaterhouseSingle seq Blc file detection
2006-11-14 amwaterhousewe already have c defined
2006-11-13 amwaterhouseREload from URL
2006-11-13 amwaterhouseEnable lower case colours
2006-11-13 amwaterhouseDont readd identical DBRef
2006-11-13 amwaterhouseUse j not i
2006-11-13 amwaterhouseFasta files with * read not identified as BLC
2006-11-13 amwaterhouseQuerystring made from line tokenized seq name, seq...
2006-11-13 amwaterhouseColours in viewport
2006-11-13 amwaterhouseText colour adapter
2006-11-13 amwaterhousesequence colours and text colours added
2006-11-13 amwaterhousecolours in viewport
2006-11-13 amwaterhouseSave text colours
2006-11-13 amwaterhouseGroup Menu level changed
2006-11-13 amwaterhouseColour text
2006-11-13 amwaterhouseSequence colour in viewport
2006-11-13 amwaterhouseFormat menu item
2006-11-13 amwaterhousetext colour saved
2006-11-13 amwaterhouseSequence colour moved to viewport
2006-11-13 amwaterhouseText colour for group
2006-11-13 amwaterhouseSave text colours
2006-11-09 amwaterhouseremove system.out
2006-11-09 amwaterhousetooltip
2006-11-09 amwaterhouseShortcuts
2006-11-09 amwaterhousesmooth font gone, setFileName and close open alignPanel
2006-11-09 amwaterhouseclose frame true
2006-11-09 amwaterhousesmooth fonts moved here
2006-11-09 amwaterhousecut and paste input output
2006-11-09 amwaterhouseclose menu item true
2006-11-09 amwaterhouseNew window
2006-11-09 amwaterhouseSmooth fonts
2006-11-09 amwaterhouseShortcuts
2006-11-09 amwaterhouseCheck conensus is not null
2006-11-09 amwaterhousealignFrame.setFileName
2006-11-09 amwaterhouseCutandpaste used for input/output
2006-11-09 amwaterhouse1.1 compatible
2006-11-08 amwaterhouseReload alignment
2006-11-08 amwaterhouseReload alignment
2006-11-08 amwaterhouseSet description
2006-11-08 amwaterhousecurrentSeq and set description in dataset
2006-11-08 amwaterhouseText by default
2006-11-08 amwaterhouseUse sequence description
2006-11-08 amwaterhouseDont set the dataset name and description
2006-11-08 amwaterhouseTooltip on mouseover
2006-11-08 amwaterhouseApple friendly
2006-11-08 amwaterhouseRemove unnecessary imports
2006-11-07 amwaterhousewarning note added to consequence
2006-11-07 amwaterhouseDont load trees if copying Viewport
2006-11-07 amwaterhouseCheck features.length>0
2006-11-07 amwaterhouseColor updated for new seq, OK is default option
2006-11-07 amwaterhouseTidy up group size after alignmentChanged
2006-11-07 amwaterhousehidden seqs and setOrder bug fixed
2006-11-07 amwaterhouseAdd keylistener to InternalFrame, not canvas
2006-11-06 amwaterhouseOnly recalc consensus for start to end of group
2006-11-06 amwaterhouseOnly calculate consenus from start to end
2006-11-06 amwaterhouseIf start is not zero, we need to put -- at the start
2006-11-06 amwaterhouseexample links
2006-11-06 amwaterhouseRemember fileName in alignFrame
2006-11-06 amwaterhousedont limit menu size
2006-11-06 amwaterhouseaccelerators, save menu item
2006-11-03 amwaterhouseAlignpanel is not new if copied from j2xml
2006-11-03 amwaterhouseConsensus may already have been removed
2006-11-03 amwaterhouseRemove unnecessary refresh
2006-11-03 amwaterhouseUse Jalview2XML to copy AlignmentPanel
2006-11-02 amwaterhousereturn if image is null
2006-11-02 amwaterhouseUpdate editMenuBar after alignment changed
2006-11-02 amwaterhouseSet menu state in alignFrame
2006-11-02 amwaterhouseFire align change for case change
2006-11-02 amwaterhouseHistory is per viewport
2006-11-02 amwaterhouseselected states set in updateMenusFromViewport
2006-11-02 amwaterhouseUse system path separator char
2006-11-02 amwaterhousedasregistry is now dasregistry.org
2006-10-30 amwaterhouseFix for feature name amended
2006-10-30 amwaterhouseshift I to inverse sequence selection
2006-10-30 amwaterhouseAppend html
2006-10-30 amwaterhouseUpdate features
2006-10-30 amwaterhouseconservation lock
2006-10-30 amwaterhousedeleteSequenceFeature
2006-10-27 amwaterhouseRemove consensus annotation if out of memory
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