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jalview.git
2014-10-07
gmungoc
JAL-1554 handle left-then-right click on sequence id
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2014-10-03
gmungoc
JAL-1264 javadoc update
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2014-10-03
gmungoc
JAL-1264 show/hide annotations; JAL-1481 Find tooltip
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2014-10-03
gmungoc
JAL-1506 delete all warning; JAL-1264 show/hide annotations
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2014-10-03
gmungoc
JAL-1264 refactored show/hide annotation types includin...
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2014-10-03
gmungoc
JAL-1481 search expression validation
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2014-10-03
gmungoc
JAL-1506 correct exit on close align frame
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2014-10-03
gmungoc
JAL-914 don't open help window twice
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2014-10-03
gmungoc
JAL-1264 show/hide annotations, JAL-1481 search validat...
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2014-09-25
gmungoc
JAL-1264 tidy up use of MouseListener for showHideAnnot...
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2014-09-25
gmungoc
JAL-1264 alternative (popup menu) way to show/hide...
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2014-09-24
gmungoc
JAL-1264 further refactoring of panel + unit tests
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2014-09-23
gmungoc
JAL-1264 first cut of panel for annotation show/hide...
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2014-09-18
gmungoc
Merge branch 'JAL-1360_Branch' into Release_2_8_2_Branch
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2014-09-18
gmungoc
Merge branch 'Release_2_8_2_Branch' of https://source...
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2014-09-18
gmungoc
JAL-1360 tweaks to match help page conventions, size...
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2014-09-18
gmungoc
JAL-1360 consistent (bold) help page headings
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2014-09-18
gmungoc
JAL-1360 Javadoc, Vector replaced with ArrayList, code...
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2014-09-18
gmungoc
JAL-1360 Javadoc/JUnit
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2014-09-18
gmungoc
JAL-1360 refactored utility method to ColorUtils class
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2014-09-18
gmungoc
JAL-1544 it's --> its
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2014-09-17
gmungoc
JAL-1360 updates to online help for user define colour...
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2014-09-17
gmungoc
Correct colour for text when colour set
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2014-09-17
gmungoc
JAL-1360 refactored for consistent lighter/darker for
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2014-09-17
gmungoc
JAL-1360 workaround for user defined colours display...
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2014-09-15
gmungoc
JAL-1542 script to show aligned positions of selected...
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2014-09-12
j.procter@dundee...
Merge branch 'Release_2_8_2_Branch' of https://source...
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2014-09-12
j.procter@dundee...
Merge branch 'bug/JAL-1486_flatfile' into Release_2_8_2...
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2014-09-12
j.procter@dundee...
JAL-1486 JAL-1543 pushed alignment viewport->view-...
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2014-09-12
j.procter@dundee...
formatting and organise imports
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2014-09-12
j.procter@dundee...
JAL-1486 fix: pass selected region to jalview.io via...
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2014-09-12
j.procter@dundee...
JAL-1199 add stockholm output to list of AppletFormatAd...
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2014-09-12
j.procter@dundee...
JAL-1486 JAL-535 refactor code for trimming alignment...
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2014-09-12
j.procter@dundee...
JAL-535 tidy interface definition and documentation
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2014-09-12
gmungoc
JAL-1516 handle null annotations
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2014-09-12
j.procter@dundee...
JAL-1516 Annotation row score output script for jalview...
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2014-07-22
j.procter@dundee...
Merge branch 'features/JAL-1333' into Release_2_8_2_Branch
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2014-07-22
j.procter@dundee...
JAL-1333 fix imports
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2014-07-22
j.procter@dundee...
Merge branch 'features/JAL-1333' into Release_2_8_2_Branch
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2014-07-22
j.procter@dundee...
JAL-1333 log4j/slf additional jars
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2014-07-22
j.procter@dundee...
JAL-1333 add log4j-slf4j bridge
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2014-07-22
j.procter@dundee...
Merge branch 'features/JAL-1333' into Release_2_8_2_Branch
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2014-07-22
j.procter@dundee...
JAL-1333 finessing log4j and slf dependencies for struc...
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2014-07-22
j.procter@dundee...
JAL-1333 JAL-1533 todo to get Chimera superposing prope...
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2014-07-22
j.procter@dundee...
JAL-1333 more superposition debugging and deadlock...
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2014-07-18
j.procter@dundee...
JAL-1379 Jpred JABA client test harness
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2014-07-18
j.procter@dundee...
JAL-1333 allow reuse of existing chimera for new or...
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2014-07-18
j.procter@dundee...
JAL-1333 more refinements - deadlocks still possible...
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2014-07-18
j.procter@dundee...
JAL-674 futzing with bugs
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2014-07-18
j.procter@dundee...
JAL-795 take colour from annotation if colour is present
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2014-07-18
j.procter@dundee...
ensure the dataset is instantiated before materialising...
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2014-07-18
j.procter@dundee...
JAL-1379 new look JPred results
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2014-07-18
j.procter@dundee...
JAL-1520 switch between Protein and non-canonical RNA...
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2014-07-18
j.procter@dundee...
JAL-1028 JAL-1142 refactor test to allow reuse of secon...
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2014-07-08
j.procter@dundee...
JAL-1333 allow reuse of existing viewers (of a specifie...
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2014-07-08
j.procter@dundee...
JAL-1333 more efficient color statement
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2014-07-04
j.procter@dundee...
JAL-1333 more abstraction and refactoring and working...
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2014-07-03
j.procter@dundee...
Merge branch 'Release_2_8_2_Branch' into features/JAL...
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2014-07-03
j.procter@dundee...
Merge branch 'hotfix/JAL-1530' into Release_2_8_2_Branch
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2014-07-03
Jim Procter
fixes JAL-1530
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2014-07-02
Jim Procter
revalidate appears to have gone away ?? (java 1.7 upgra...
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2014-07-02
Jim Procter
formatting
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2014-07-02
Jim Procter
JAL-1333 JAL-1527 refactors to create core structure...
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2014-07-02
Jim Procter
JAL-1333 test suite for key functionality of java inter...
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2014-07-02
Jim Procter
JAL-1333 Chimera specific code extracted from the...
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2014-07-01
Jim Procter
Merge branch 'feature/JAL-1333' into features/JAL-1333
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2014-06-23
Jim Procter
Merge branch 'JAL-1526' into Release_2_8_2_Branch
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2014-06-23
Jim Procter
JAL-1526 simple function to write a snapshot of the...
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2014-06-12
Jim Procter
Merge branch 'hotfix/JAL-1524' into Release_2_8_2_Branch
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2014-06-12
Jim Procter
Merge branch 'hotfix/JAL-1524' into Release_2_8_1_Branch
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2014-06-12
Jim Procter
JAL-1524 fix
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2014-06-10
Jim Procter
Merge branch 'feature/JAL-1379' into Release_2_8_2_Branch
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2014-06-10
Jim Procter
JAL-1379 a JPred v3.0.1 client via JABA 2.1
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2014-06-10
Jim Procter
JAL-1379 allow services with an MSA interface to create...
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2014-06-10
Jim Procter
tidy source
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2014-06-10
Jim Procter
JAL-1379 allow JABA2 tests to run on local or default...
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2014-06-10
Jim Procter
JAL-1379 refactor Jws2 service client so dynamic servic...
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2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
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2014-06-06
Jim Procter
JAL-1520 fix unicode translation errors.
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2014-06-06
Jim Procter
JAL-1519 make the splash screen larger/more readable
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2014-06-06
Jim Procter
JAL-1519 - tidy build properties management code
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2014-06-06
Jim Procter
JAL-1519 fix author update issue (doh)
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2014-06-06
Jim Procter
JAL-1140 Add Anne Menard to author list
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2014-06-06
Jim Procter
JAL-1517 copyright and formatting
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2014-06-06
Jim Procter
JAL-1518 drop Jalopy from utils directory
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2014-06-06
Jim Procter
JAL-1517 copyright and formatting
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2014-06-06
Jim Procter
JAL-1517 source formatting
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2014-06-06
Jim Procter
JAL-1518 drop Jalopy from utils directory
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-06-05
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_2_Branch
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2014-06-04
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04
Jim Procter
JAL-1503 typo
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2014-06-04
Jim Procter
Merge branch 'develop' into Release_2_8_2_Branch
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2014-06-04
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04
Jim Procter
JAL-1503 update author list for 2.8.1
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2014-06-04
Jim Procter
Merge branch 'docs/2_8_1_Release' into Release_2_8_1_Branch
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2014-06-04
Jim Procter
JAL-690 JAL-1503 make file associations optional for...
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2014-06-04
Jim Procter
Merge branch 'develop' of https://source.jalview.org...
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2014-06-04
Jim Procter
JAL-952 fixed unresolved conflict breaking build
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