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jalview.git
2020-06-01 BobHansonJAL-3262 from JAL-3523-applet JalviewApp and JalviewJSApi commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3262 from JAL3253-applet core_jvjmol.z.js static... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 Regex optimization from JAL-3253-applet; also... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonTHIRDPARTYLIBS referred to intervalstore-v1.0 still commit | commitdiff | tree | snapshot
2020-06-01 BobHansoncorrects Platform.openURL commit | commitdiff | tree | snapshot
2020-06-01 BobHansonJAL-3626 adding compatible Platform.java commit | commitdiff | tree | snapshot
2020-06-01 BobHansonSwingJS update commit | commitdiff | tree | snapshot
2020-06-01 BobHansonMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-06-01 BobHansonswingjs/api, javajs/async commit | commitdiff | tree | snapshot
2020-06-01 soaresJAL-3225 small fixes for building within Eclipse commit | commitdiff | tree | snapshot
2020-05-28 soaresMerge branch 'Jalview-JS/develop' of https://source... commit | commitdiff | tree | snapshot
2020-05-28 BobHansonJAL-3626 transpiler and SwingJS upgrade commit | commitdiff | tree | snapshot
2020-05-28 BobHansonVarna fix for hashtable.remove(value) [unclear] commit | commitdiff | tree | snapshot
2020-05-28 BobHansonJAL-3636 ColorUtils cleaner test for hex color commit | commitdiff | tree | snapshot
2020-05-28 soaresMerge branch 'develop' into Jalview-JS/develop commit | commitdiff | tree | snapshot
2020-05-28 BobHansonGitter comment 2020.05.28 Cache.log.err(msg) not appearing commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3624 use temp file for SIFT download in JS, correct... commit | commitdiff | tree | snapshot
2020-05-28 gmungocJAL-3624 log when SIFTS mapping fails commit | commitdiff | tree | snapshot
2020-05-27 Ben SoaresJAL-3541 ensure deletion of cloverReportDir commit | commitdiff | tree | snapshot
2020-05-27 Ben SoaresJAL-3541 small fix for clover.xml location expected... commit | commitdiff | tree | snapshot
2020-05-26 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2020-05-26 gmungocJAL-1889 disable test failing on build server commit | commitdiff | tree | snapshot
2020-05-26 soaresMerge branch 'bug/JAL-3541_cloverReport_gradle_task_fai... commit | commitdiff | tree | snapshot
2020-05-26 soaresJAL-3541 added a property/variable style comment to... bug/JAL-3541_cloverReport_gradle_task_fails commit | commitdiff | tree | snapshot
2020-05-26 gmungocJAL-3624 log when SIFTS mapping fails commit | commitdiff | tree | snapshot
2020-05-26 gmungocMerge branch 'feature/JAL-3624siftsInJS' into develop commit | commitdiff | tree | snapshot
2020-05-25 soaresJAL-3541 selectively merged build.gradle and gradle... commit | commitdiff | tree | snapshot
2020-05-25 Jim ProcterJAL-3626 rescue automatic configuration of JALVIEW_VERS... commit | commitdiff | tree | snapshot
2020-05-19 gmungocJAL-3621 corrected sequence feature sort and test commit | commitdiff | tree | snapshot
2020-05-19 gmungocJAL-3624 use temp file for SIFT download in JS, correct... feature/JAL-3624siftsInJS commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3463 avoid Thread.sleep() as not supported in SwingJS commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3621 update to intervalstore v1.1 commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3529 test updated for revised signature of getDBRefs() commit | commitdiff | tree | snapshot
2020-05-18 gmungocMerge branch 'Jalview-JS/develop' into develop commit | commitdiff | tree | snapshot
2020-05-18 gmungocJAL-3613 remove debug code committed in error commit | commitdiff | tree | snapshot
2020-05-15 Ben SoaresJAL-3541 Fixed report path for build artifacts commit | commitdiff | tree | snapshot
2020-05-14 Ben SoaresJAL-3541 Added mem setting and jvmArgs for cloverReporting commit | commitdiff | tree | snapshot
2020-05-14 Ben SoaresJAL-3541 Individual tests now instrumented and reported... commit | commitdiff | tree | snapshot
2020-05-12 Ben SoaresJAL-3541 Helpers for running tests, and other commands... commit | commitdiff | tree | snapshot
2020-05-12 Ben SoaresJAL-3541 JavaExec tasks for cloverInstr and cloverRepor... commit | commitdiff | tree | snapshot
2020-05-01 gmungocJAL-3613 check sequence overlap when matching search... commit | commitdiff | tree | snapshot
2020-04-22 soaresJAL-3225 save auto formatting settings in org.eclipse... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 release notes - JAL-247 - for auto-set-ID... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 fix JAL-3574 - remove from known issues for... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3574 JAL-3407 release notes commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3407 add and document ComputePeptideVariants.groovy commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3577 changed default RELEASE dir in build.gradle... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3567 JAL-3407 document sequence features report... commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-3210 try adding setup method to unit test failing... commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-1889 corrected wait for consensus to be calculated commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3577 Added newer install dirs to the deletion list... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates... commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-367 code tidy commit | commitdiff | tree | snapshot
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide commit | commitdiff | tree | snapshot
2020-04-21 gmungocJAL-3603 load annotation file from RELATIVE_URL in... commit | commitdiff | tree | snapshot
2020-04-21 Ben SoaresJAL-3602 Added configuration for enforced use of UTF... commit | commitdiff | tree | snapshot
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips commit | commitdiff | tree | snapshot
2020-04-17 BobHansonadded .gitignore paths commit | commitdiff | tree | snapshot
2020-04-16 BobHansonJAL-3587 Load Project bug commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit... commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein conseque... commit | commitdiff | tree | snapshot
2020-04-16 gmungocJAL-3567 report mapped location for virtual features... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3407 JAL-3529 release notes commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterJAL-3407 release date set to 16th April, known issue... commit | commitdiff | tree | snapshot
2020-04-14 Jim ProcterMerge branch 'testing/JAL-3577_jalviewversion_autoset_f... commit | commitdiff | tree | snapshot
2020-04-14 gmungocJAL-3583 remove debug logging, Javadoc added commit | commitdiff | tree | snapshot
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS commit | commitdiff | tree | snapshot
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e... commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3596 change redacted commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text... commit | commitdiff | tree | snapshot
2020-04-12 gmungocJAL-3583 consistent last[Formatted]Tooltip, show once... commit | commitdiff | tree | snapshot
2020-04-09 BobHansonJAL-3587 save and reload project file fix commit | commitdiff | tree | snapshot
2020-04-09 Ben SoaresJAL-3588 Remove Examples folder in windows Program... commit | commitdiff | tree | snapshot
2020-04-09 Jim ProcterJAL-3577 automatically configure JALVIEW_VERSION for... testing/JAL-3577_jalviewversion_autoset_fixed commit | commitdiff | tree | snapshot
2020-04-08 BobHansonJAL-3253 SwingJS upgrade including J11 transpiler 3... commit | commitdiff | tree | snapshot
2020-04-08 BobHansonJAL-3253 merge of new SwingJS api commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: the fixy bit merge/Jalview-JS_develop_with_develop_build.gradle_gradle.properties_utils_install4j commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: the rest of the changes commit | commitdiff | tree | snapshot
2020-04-07 soaresmerge from develop: Most of the changes commit | commitdiff | tree | snapshot
2020-04-07 BobHansonJAL-3589 (old Platform) fix for Jalvew-JS/develop only. commit | commitdiff | tree | snapshot
2020-04-07 gmungocJAL-3210 fudge for JalviewJS to avoid IntervalStore... commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresJAL-3577 improvement to non-release DMG background... task/JAL-3577_Jalview_Test_installers commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers... commit | commitdiff | tree | snapshot
2020-04-07 Ben SoaresJAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEA... commit | commitdiff | tree | snapshot
2020-04-06 Ben SoaresJAL-3577 Fixed Jalview Programme Group in Windows menu... commit | commitdiff | tree | snapshot
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference commit | commitdiff | tree | snapshot
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... commit | commitdiff | tree | snapshot
2020-04-06 Jim ProcterJAL-3407 updated release date to Thursday 9th April... commit | commitdiff | tree | snapshot
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers... commit | commitdiff | tree | snapshot
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