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jalview.git
2015-08-20 gmungocJAL-1833 added unit tests (some failing) for wrapToolitp commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1782 don't save TESTNG output summary to git commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1725 log to sysout when listener shuts down commit | commitdiff | tree | snapshot
2015-08-19 gmungocJAL-1742 suppress 'add chain' option for Jmol, pull... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1861 bugfix to allow parsing of stockholm files... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1835 added UI for BioJSON embbeding preference commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1835 made BioJSON embedding to html exports configu... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1834 added tooltip to the PDB sequence fetcher... commit | commitdiff | tree | snapshot
2015-08-18 tcofoegbuJAL-1833 modified tooltip to force wraping of long... commit | commitdiff | tree | snapshot
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 separated SearchResults.getCharacters() from... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1270 testIsMappable added commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1805 corrected javadoc only commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbuJAL-1832 improvement to enable result update only when... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1829 JAL-1830 refactoring for correct mapping ... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 smarter matching when following mouseover... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1691 scan full width and depth of alignment for... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1800 SearchResults.equals() to allow smarter mouseo... commit | commitdiff | tree | snapshot
2015-08-17 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1551 updated to reflect changes to Eclipse preferen... commit | commitdiff | tree | snapshot
2015-08-17 gmungocJAL-1551 properties sorted (unchanged) for ease of... commit | commitdiff | tree | snapshot
2015-08-17 tcofoegbuJAL-1831 update all maxItems annotation to the max... commit | commitdiff | tree | snapshot
2015-08-14 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-14 tcofoegbuJAL-1831 added changes to allow auto-generation of... commit | commitdiff | tree | snapshot
2015-08-13 tcofoegbuJAL-1826 bug fix to select pdb sequence fetcher via... commit | commitdiff | tree | snapshot
2015-08-13 tcofoegbuJAL-1641 added type to BioJSON sequence object and... commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbuJAL-1641 updated json help doc commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-11 tcofoegbuadd ability to launch jalview from exported html +... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-1645 updated final release date for version 2.9 commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterMerge branch 'release/2_9_documentation' into develop commit | commitdiff | tree | snapshot
2015-08-10 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-08-10 gmungocJAL-1516 indent multiple annotation parameters on new... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-736 relocate group associated conservation symbols... commit | commitdiff | tree | snapshot
2015-08-10 Jim ProcterJAL-736 source formatting commit | commitdiff | tree | snapshot
2015-08-10 tcofoegbuJAL-1486 fixed flatfile output of visible region for... commit | commitdiff | tree | snapshot
2015-08-07 tcofoegbuJAL-1824 updated caching procedure for pdb entries... commit | commitdiff | tree | snapshot
2015-08-06 tcofoegbumerge commit | commitdiff | tree | snapshot
2015-08-06 tcofoegbuJAL-1824 corrected copy'n'paste error introduced from... commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterJAL-1821 formatting commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterJAL-1821 launch the structure view in a separate thread... commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterJAL-1822 create dataset sequences if they aren’t alread... commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterJAL-1821 JAL-1759 make sure we wait around until the... commit | commitdiff | tree | snapshot
2015-08-05 Jim ProcterJAL-1821 patch for completeness - first model number... commit | commitdiff | tree | snapshot
2015-08-04 tcofoegbuJAL-1816 fixed bug in identify file preventing it from... commit | commitdiff | tree | snapshot
2015-08-04 tcofoegbuJAL-1821 updated implementation of launchStructureViewe... commit | commitdiff | tree | snapshot
2015-08-04 tcofoegbuupdated the reference sequence column of cached structu... commit | commitdiff | tree | snapshot
2015-08-04 tcofoegbuJAL-1788 updated biojson docs commit | commitdiff | tree | snapshot
2015-08-04 tcofoegbuJAL-1821 updated the reference sequence column of struc... commit | commitdiff | tree | snapshot
2015-08-03 Jim ProcterJAL-1821 JAL-1759 reinstate rotation speed configuratio... commit | commitdiff | tree | snapshot
2015-08-03 Jim ProcterJAL-1821 JAL-1759 updated Jmol has different model... commit | commitdiff | tree | snapshot
2015-08-03 Jim ProcterJAL-1821 avoid race condition when multiple structures... commit | commitdiff | tree | snapshot
2015-07-30 tcofoegbuJAL-1443 modified exception notifications commit | commitdiff | tree | snapshot
2015-07-30 tcofoegbuJAL-1710 filtered colons(:) from structure chooser... commit | commitdiff | tree | snapshot
2015-07-29 tcofoegbuJAL-1821 discarded sequence name truncation in summary... commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterMerge branch 'features/JAL-1759jmolUpdate' into develop commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterJAL-1759 formatting
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2015-07-23 Jim ProcterJAL-1759 reinstate changes from bdfde6ef989da0702cef90f... commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterJAL-1759 formatting commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie... commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterMerge branch 'task/JAL-1794_jettyExamplesServer' into... commit | commitdiff | tree | snapshot
2015-07-23 tcofoegbuResolved merge conflict in EdtiCommandTest.java commit | commitdiff | tree | snapshot
2015-07-23 tcofoegbuJAL-1805 modified test setup's so the are ran for group... commit | commitdiff | tree | snapshot
2015-07-23 tcofoegbuJAL-1819 Test cases for Identify file commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterMerge branch 'bug/JAL-1819_isNaN' into develop commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterJAL-1819 commented out debugging message to stderr bug/JAL-1819_isNaN commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterJAL-1551 JAL-1819 formatting/imports commit | commitdiff | tree | snapshot
2015-07-23 Jim ProcterJAL-1819 use Float.isNaN() to check for NaNs! commit | commitdiff | tree | snapshot
2015-07-22 Jim ProcterJAL-1805 add group spec to the BeforeMethod setup ... commit | commitdiff | tree | snapshot
2015-07-22 Jim ProcterJAL-1782 added summary test report for Release_2_9_Bran... commit | commitdiff | tree | snapshot
2015-07-22 tcofoegbuJAL-1667 JAL-1668 JAL-1553 help docs update commit | commitdiff | tree | snapshot
2015-07-21 tcofoegbuMerge commit | commitdiff | tree | snapshot
2015-07-21 tcofoegbuJAL-1443 bugfix to prevent loading of unidentifiable... commit | commitdiff | tree | snapshot
2015-07-21 Jim ProcterMerge branch 'ismb/2015_demo' into develop commit | commitdiff | tree | snapshot
2015-07-16 Jim Procterrevision for JAL-1749 - ensure view 2D structure menu... commit | commitdiff | tree | snapshot
2015-07-16 Jim Procterfix for JAL-1776 renamed popup menu entry commit | commitdiff | tree | snapshot
2015-07-15 tcofoegbuupdated version info in seqfetch.html commit | commitdiff | tree | snapshot
2015-07-15 tcofoegbuJAL-1553 reviewed & updated docs commit | commitdiff | tree | snapshot
2015-07-15 tcofoegbuJAL-1667 JAL-1668 updated reviewed and updated docs commit | commitdiff | tree | snapshot
2015-07-15 tcofoegbuJAL-1788 updated docs commit | commitdiff | tree | snapshot
2015-07-15 gmungocJAL-1813 only pair up A-Z with a-z if annotation is RNA commit | commitdiff | tree | snapshot
2015-07-15 tcofoegbuJAL-1769 updated test data commit | commitdiff | tree | snapshot
2015-07-13 tcofoegbuJAL-1788 added help documentation for biojson commit | commitdiff | tree | snapshot
2015-07-12 gmungocJAL-1759 corrected jmol applet lib name features/JAL-1759jmolUpdate commit | commitdiff | tree | snapshot
2015-07-10 tcofoegbuJAL-1759 code fix to enable testng ant task compile... commit | commitdiff | tree | snapshot
2015-07-09 tcofoegbuMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-07-09 tcofoegbuJAL-1769 increased timeout period for eps generation commit | commitdiff | tree | snapshot
2015-07-09 tcofoegbuJAL-1806 bug fix to loop through the entire data file... commit | commitdiff | tree | snapshot
2015-07-09 tcofoegbuJAL-1769 added test for commandline input operations commit | commitdiff | tree | snapshot
2015-07-08 gmungocJAL-1759 merge from develop commit | commitdiff | tree | snapshot
2015-07-08 gmungocMerge branch 'develop' of https://source.jalview.org... commit | commitdiff | tree | snapshot
2015-07-08 gmungocJAL-1598 replaced faulty regex, amended Varna call... commit | commitdiff | tree | snapshot
2015-07-08 tcofoegbuJAL-1641 biojson documentation with docson commit | commitdiff | tree | snapshot
2015-07-07 tcofoegbuJAL-1769 fixed output to jalview (.jpv) file in headles... commit | commitdiff | tree | snapshot
2015-07-07 tcofoegbuJAL-1805 test envirionment separation commit | commitdiff | tree | snapshot
2015-07-06 tcofoegbuMerge branch 'features/1769_headless-mode-test' into... commit | commitdiff | tree | snapshot
2015-07-06 tcofoegbuJAL-1641 added json schema for jalview JSON model,... commit | commitdiff | tree | snapshot
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