jalview.git
2005-09-15 amwaterhouse2.05b
2005-09-15 amwaterhouseAdd Uracil as X unknown
2005-09-15 amwaterhouseOptionPane warning for out of memory
2005-09-15 amwaterhouseremove system.out
2005-09-15 amwaterhouseRemove key listener
2005-09-15 amwaterhouseDont add time to build date
2005-09-15 amwaterhouseAdd main-class to jar files
2005-09-15 amwaterhouseUse equalsIgnoreCase
2005-09-15 amwaterhouseApplet has main method, excutable
2005-09-15 amwaterhouseLogger moved to prefs so that class not found error...
2005-09-14 amwaterhousePreferences updated
2005-09-14 amwaterhouseMove bootStrap/distance settings outside thread
2005-09-14 amwaterhouseAdd end of consensus test for wrapped edit
2005-09-14 amwaterhousefullSeqId should follow preference value
2005-09-14 amwaterhouseMake new frame selected
2005-09-14 amwaterhouseRemove system out tests
2005-09-14 amwaterhouseCopy and paste uses FASTA format
2005-09-14 amwaterhouseCall methods in treeCanvas on init
2005-09-14 amwaterhouseoffy changes
2005-09-14 amwaterhouseOutOfMemory try catch
2005-09-14 amwaterhouseUse font size, not font height
2005-09-14 amwaterhouseResize for mac
2005-09-14 amwaterhouseUse getTreeFont instead of getFont
2005-09-14 amwaterhouseadd fontname, size and style for trees
2005-09-14 amwaterhouseFont change instead of font size
2005-09-14 amwaterhouseAdd Export tab
2005-09-14 amwaterhouseMake button protected
2005-09-14 amwaterhouseuse fontchooser to change fonts
2005-09-14 amwaterhouseCenter labels
2005-09-14 amwaterhouseSave fonts for trees
2005-09-14 amwaterhouseChange fonts in Treepanel
2005-09-14 amwaterhouseAdd header
2005-09-14 amwaterhouseSystem.gc after outofmemory
2005-09-14 amwaterhousePCA is in outofmemory try-catch
2005-09-14 amwaterhouseTreeFont added, binding rebuilt
2005-09-13 amwaterhouseDont respond to mouse movements if alignment wrapped
2005-09-13 amwaterhouseGive focus to textarea on startup
2005-09-13 amwaterhouseEPSOptions added
2005-09-13 amwaterhouseWarn if out of memory
2005-09-12 amwaterhouseRemove gaps in regions, not char by char
2005-09-12 amwaterhouseAlways return true for directories
2005-09-12 amwaterhousenull pointers removed
2005-09-12 amwaterhouseNull pointers removed
2005-09-12 amwaterhouseDont fastpaint if movement is zero
2005-09-12 amwaterhouseUpdate overview after change
2005-09-12 amwaterhouseUpdate overview in alignmentChanged
2005-09-12 amwaterhouseSize checking in drawGraph
2005-09-12 amwaterhouseOverview subsamples alignment
2005-09-08 amwaterhouseMove tree property change to treePanel
2005-09-08 amwaterhouseOnly 1 NJtree
2005-09-08 amwaterhouseTreePanel takes viewport
2005-09-08 amwaterhouseREmove unnecessary imports
2005-09-08 amwaterhouseInit PCA in thread
2005-09-08 amwaterhouseIf no consensus, disable certain colour options
2005-09-08 amwaterhouseupdate consensus and conservation are in try catch...
2005-09-08 amwaterhouseOptimise switch to fastPaint
2005-09-08 amwaterhouseCorrect mouse pressed bug
2005-09-08 amwaterhouseOptimised for wide alignments
2005-09-08 amwaterhouseLoad in a thread
2005-09-08 amwaterhouseMake menuitems protected
2005-09-08 amwaterhouseIf vconsensus is null, return
2005-09-08 amwaterhouseAdd lowercase nucleotides to nucleotideHash
2005-09-05 jprocterMore informative error messages.
2005-09-02 amwaterhouseApplet search by residue index fixed
2005-09-01 amwaterhouseAdd header to file
2005-09-01 amwaterhousefirePropertyChange if sequences deleted
2005-09-01 amwaterhouseNeed reference to mainApplet
2005-09-01 amwaterhouseUse propertyListener for alignment edits
2005-09-01 amwaterhouseSort by added to preferences
2005-09-01 amwaterhouseNo need to recalculate image for font change
2005-08-31 amwaterhouseRepaint scale panel after unselect all
2005-08-31 amwaterhouseMust update globalColourScheme with new consensus
2005-08-30 amwaterhouse2.05
2005-08-30 amwaterhouseUserColour gui modified
2005-08-30 amwaterhouseMake 24 colours to be sure
2005-08-30 amwaterhouseValidate buttons and fire on mouse press, not mouse...
2005-08-30 amwaterhouseSet user colours same as global
2005-08-30 amwaterhouseRepaint annotations after edit
2005-08-30 amwaterhouseWrapped, getWidth > vconsensus
2005-08-30 amwaterhouseUpdate colours after remove left, cut, paste
2005-08-30 amwaterhouseKeep mouse drag to 1 block when wrapped
2005-08-30 amwaterhouseDont setSelected on new frames
2005-08-30 amwaterhouseOut of bounds checks
2005-08-30 amwaterhouseSet startSeq 0 if wrap alignment
2005-08-30 amwaterhouseDont set clip if its not null
2005-08-30 amwaterhouseBounds checking
2005-08-30 amwaterhouseIf Mac, dont use fastpaint Release_2_05
2005-08-30 amwaterhouseCan edit in wrapped view
2005-08-29 amwaterhouseReset all colour schemes after gaps removed
2005-08-29 amwaterhouseInclude None in default colours
2005-08-29 amwaterhouseDefault user colour is 23 white colours
2005-08-29 amwaterhouseKeep startRes the same after removing columns
2005-08-29 amwaterhouseReset ClustalX after removing gaps
2005-08-29 amwaterhouseif seq<0, return
2005-08-29 amwaterhouseload sequenceURLLinks static method
2005-08-29 amwaterhouseDont call fastPaint if Mac
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-29 amwaterhouseEdit and annotate wrapped alignment
2005-08-26 amwaterhouseCreate new image only on resize, set fontMetrics on...
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