jalview.git
2020-05-12 Ben SoaresJAL-3541 Helpers for running tests, and other commands...
2020-05-12 Ben SoaresJAL-3541 JavaExec tasks for cloverInstr and cloverRepor...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 add GPL license to Jalview source files
2020-04-21 Jim ProcterJAL-3407 release notes - JAL-247 - for auto-set-ID...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 fix JAL-3574 - remove from known issues for...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3574 JAL-3407 release notes
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3574filterByPOS' into documentati...
2020-04-21 Jim ProcterMerge branch 'documentation/JAL-3407_2.11.1_release...
2020-04-21 Jim ProcterJAL-3407 add and document ComputePeptideVariants.groovy
2020-04-21 Ben SoaresJAL-3577 changed default RELEASE dir in build.gradle...
2020-04-21 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2020-04-21 Jim ProcterJAL-3567 JAL-3407 document sequence features report...
2020-04-21 Ben SoaresJAL-3577 Added newer install dirs to the deletion list...
2020-04-21 Jim ProcterMerge branch 'bug/JAL-3567virtualFeatureCoordinates...
2020-04-21 Jim ProcterJAL-367 code tidy
2020-04-21 Jim ProcterJAL-3567 translated rather than imputed peptide
2020-04-17 gmungocJAL-3567 unit tests for linked feature tooltips
2020-04-16 gmungocJAL-3567 adjust layout of linked feature report, unit...
2020-04-16 gmungocJAL-3567 added 'imputed by Jalview' to protein conseque...
2020-04-16 gmungocJAL-3567 report mapped location for virtual features...
2020-04-14 Jim ProcterJAL-3407 JAL-3529 release notes
2020-04-14 Jim ProcterMerge branch 'bug/JAL-3529_uniprotidsinstockholm' into...
2020-04-14 Jim ProcterJAL-3529 revert ordering of DBRef addition so it reflec...
2020-04-14 Jim ProcterJAL-3597 improved Memory test suite by detecting base...
2020-04-14 Jim ProcterJAL-3407 release date set to 16th April, known issue...
2020-04-14 Jim ProcterMerge branch 'testing/JAL-3577_jalviewversion_autoset_f...
2020-04-13 gmungocJAL-3574 test coverage corners bug/JAL-3574filterByPOS
2020-04-13 gmungocJAL-3574 Matcher with integer/long value pattern (e...
2020-04-12 gmungocJAL-3596 change redacted
2020-04-12 gmungocJAL-3596 don't draw text over features if Show Text...
2020-04-09 Ben SoaresJAL-3588 Remove Examples folder in windows Program...
2020-04-09 Jim ProcterJAL-3577 automatically configure JALVIEW_VERSION for... testing/JAL-3577_jalviewversion_autoset_fixed
2020-04-07 Ben SoaresJAL-3577 improvement to non-release DMG background... task/JAL-3577_Jalview_Test_installers
2020-04-07 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers...
2020-04-07 Ben SoaresJAL-3577 Added DEVELOP DMG styling. Improved TEST-RELEA...
2020-04-06 Ben SoaresJAL-3577 Fixed Jalview Programme Group in Windows menu...
2020-04-06 Jim ProcterJAL-3407 redact java 8 incompatible type inference
2020-04-06 Jim ProcterJAL-3407 updated release date to Thursday 9th April...
2020-04-06 gmungocJAL-3581 no hidden sequence marker if hidden markers...
2020-04-06 Ben SoaresJAL-3577 Moved application Categories for freedesktop...
2020-04-06 Ben SoaresJAL-3577 removed debugging
2020-04-06 Ben SoaresMerge branch 'task/JAL-3577_Jalview_Test_installers...
2020-04-06 Ben SoaresJAL-3577 Added existing and new Application IDs for...
2020-04-06 gmungocJAL-3579 no Feature Editor if features not shown
2020-04-06 Ben SoaresJAL-3577 Changed shortName to INTERNAL_ID
2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value...
2020-04-05 Ben SoaresJAL-3577 Changed Windows internal ID to a new value...
2020-04-04 Ben SoaresJAL-3577 Added DS_Store for Test release to look like...
2020-04-03 Ben SoaresJAL-3577 Added a jalviewt scheme ONLY to TEST-RELEASE...
2020-04-03 Ben SoaresJAL-3577 cleaned up old DMG files. Added NON-RELEASE...
2020-04-02 Ben SoaresJAL-3577 First attempt at new folder names
2020-04-02 Ben SoaresJAL-3572 Added getdown Implementation-Version to getdow...
2020-04-02 Ben SoaresMerge branch 'improvement/JAL-3394_added_categories_to_...
2020-03-31 Jim ProcterMerge branch 'documentation/Release_2_11_1_Branch'...
2020-03-31 Jim ProcterJAL-3407 basic doc for releasing jalview - will be...
2020-03-31 Jim ProcterJAL-3407 updated release date to 2nd April, and first...
2020-03-31 gmungocJAL-1889 better (?) wait for Conservation thread
2020-03-31 Jim ProcterMerge branch 'documentation/Release_2_11_1_Branch'...
2020-03-30 Jim ProcterJAL-3407 2.11.1.0 release date bump - maybe tomorrow...
2020-03-30 Jim ProcterJAL-3407 JAL-3130 back out java 9+ syntax that breaks...
2020-03-27 soaresJAL-3225 updated essential files for eclipse project...
2020-03-26 Ben SoaresJAL-3225 Also look for local.properties in file named...
2020-03-26 soaresJAL-3225 This one file needed for project if git clean...
2020-03-26 Ben SoaresJAL-3225 All of .settings now gitignored. org.eclipse...
2020-03-25 Ben SoaresJAL-3248 Added instructions for downloading and configu...
2020-03-20 Jim ProcterJAL-3562 exclude testNG groups from a build via -Ptestn...
2020-03-20 Jim ProcterJAL-3407 JAL-3562 release notes
2020-03-20 Jim ProcterJAL-3407 rejigging new features - simplify release...
2020-03-20 Jim ProcterJAL-3407 reformat releases.html
2020-03-20 Jim ProcterJAL-3407 JAL-3549 javadoc
2020-03-20 Jim ProcterJAL-3407 - release notes for JAL-3547
2020-03-20 Jim ProcterJAL-3549 javadoc
2020-03-19 gmungocMerge branch 'develop' of https://source.jalview.org...
2020-03-19 Ben SoaresJAL-3541 increase maxheapsize for test worker process
2020-03-19 Ben SoaresJAL-3541 tidying build.gradle, delete cloverInstrDir...
2020-03-19 gmungocJAL-3305 don't propagate an empty SelectionGroup to...
2020-03-19 Ben SoaresJAL-3541 put org.gradle.jvmargs explicitly into gradle...
2020-03-18 Ben SoaresJAL-3541 merged cleanClover with develop
2020-03-18 Ben SoaresJAL-3541 perhaps a better clean for clover. fixed
2020-03-18 Ben SoaresJAL-3541 perhaps a better clean for clover
2020-03-17 Ben SoaresJAL-3541 rejigged clover tasks very mildly
2020-03-17 Ben SoaresRevert "JAL-3541 trying out previous cloverReport task"
2020-03-17 Ben SoaresJAL-3541 trying out previous cloverReport task
2020-03-16 Jim ProcterJAL-3407 JAL-3187 help documentation for virtual featur...
2020-03-16 Jim ProcterJAL-3407 JAL-3549 explicitly mention the ‘no features...
2020-03-16 Jim ProcterJAL-3407 group together ‘virtual feature’ related featu...
2020-03-16 Jim ProcterMerge branch 'develop' of source.jalview.org/git/jalvie...
2020-03-12 Ben SoaresMerge commit '3fe5792cc63d53a5ace952bd68d3bb673c97f588... improvement/JAL-3394_added_categories_to_unix_shell_installer_desktop_file
2020-03-12 Ben SoaresJAL-3394 updated version if install4j gradle plugin
2020-03-12 Ben SoaresMerge branch 'develop' into improvement/JAL-3394_added_...
2020-03-09 gmungocJAL-3528 unit tests added for failed lookup, Javadoc
2020-03-09 gmungocJAL-3407 3549 in release notes
2020-03-09 gmungocJAL-3549 JAL-3305 no Sort By Score / Density if no...
2020-03-09 Ben SoaresJAL-3227 slightly adapted download_jres.sh to make...
2020-03-09 Ben SoaresJAL-3394 Made Categories line configurable/readable...
2020-03-09 gmungocJAL-3412 update layout whenever desired id width changes testbuild/JAL-3412_getIdWidth_test
2020-03-06 Ben SoaresJAL-3394 Added Categories=Science;Biology;Java; to...
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