_j2sclasslist_jmol.txt

   1 jalview/ext/jmol/JalviewJmolBinding.js
   2 jalview/ext/jmol/JmolCommands.js
   3 jalview/ext/jmol/JmolParser.js
   4 jalview/gui/AppJmol.js
   5 jalview/gui/AppJmolBinding.js
   6 jalview/gui/StructureViewerBase.js
   7 jalview/io/StructureFile.js
   8 jalview/jbgui/GStructureViewer.js
   9 jalview/renderer/seqfeatures/FeatureColourFinder.js
  10 jalview/structure/StructureListener.js
  11 jalview/structure/StructureMapping.js
  12 jalview/structure/StructureMappingcommandSet.js
  13 jalview/structures/models/AAStructureBindingModel.js
  14 jalview/structures/models/SequenceStructureBindingModel.js
  15 jalview/util/CaseInsensitiveString.js
  16 jalview/util/HttpUtils.js
  17 jalview/util/MapList.js
  18 jalview/ws/dbsources/EbiFileRetrievedProxy.js
  19 jalview/ws/dbsources/Pdb.js
  20 jalview/ws/seqfetcher/DbSourceProxy.js
  21 jalview/ws/seqfetcher/DbSourceProxyImpl.js
  22 jalview/ws/seqfetcher/DbSourceProxyRoot.js
  23 java/awt/font/TextAttribute.js
  24 java/awt/image/ImageProducer.js
  25 java/awt/image/PixelGrabber.js
  26 java/io/BufferedWriter.js
  27 java/io/FilterOutputStream.js
  28 java/io/OutputStream.js
  29 java/io/OutputStreamWriter.js
  30 java/io/PrintStream.js
  31 java/io/StringWriter.js
  32 java/io/Writer.js
  33 javajs/api/BytePoster.js
  34 javajs/api/GenericOutputChannel.js
  35 javajs/awt/Font.js
  36 javajs/awt/FontManager.js
  37 javajs/util/A4.js
  38 javajs/util/BS.js
  39 javajs/util/CU.js
  40 javajs/util/DF.js
  41 javajs/util/LimitedLineReader.js
  42 javajs/util/M3.js
  43 javajs/util/M34.js
  44 javajs/util/M4.js
  45 javajs/util/Measure.js
  46 javajs/util/OC.js
  47 javajs/util/P3.js
  48 javajs/util/P3i.js
  49 javajs/util/P4.js
  50 javajs/util/T3.js
  51 javajs/util/T3i.js
  52 javajs/util/T4.js
  53 javajs/util/V3.js
  54 mc_view/Atom.js
  55 mc_view/Bond.js
  56 mc_view/PDBChain.js
  57 mc_view/Residue.js
  58 org/jmol/adapter/readers/pdb/PdbReader.js
  59 org/jmol/adapter/smarter/Atom.js
  60 org/jmol/adapter/smarter/AtomIterator.js
  61 org/jmol/adapter/smarter/AtomSetCollection.js
  62 org/jmol/adapter/smarter/AtomSetCollectionReader.js
  63 org/jmol/adapter/smarter/AtomSetObject.js
  64 org/jmol/adapter/smarter/Bond.js
  65 org/jmol/adapter/smarter/BondIterator.js
  66 org/jmol/adapter/smarter/Resolver.js
  67 org/jmol/adapter/smarter/SmarterJmolAdapter.js
  68 org/jmol/adapter/smarter/Structure.js
  69 org/jmol/api/AtomIndexIterator.js
  70 org/jmol/api/EventManager.js
  71 org/jmol/api/GenericFileInterface.js
  72 org/jmol/api/GenericMouseInterface.js
  73 org/jmol/api/GenericPlatform.js
  74 org/jmol/api/Interface.js
  75 org/jmol/api/JmolAdapter.js
  76 org/jmol/api/JmolAdapterAtomIterator.js
  77 org/jmol/api/JmolAdapterBondIterator.js
  78 org/jmol/api/JmolCallbackListener.js
  79 org/jmol/api/JmolGraphicsInterface.js
  80 org/jmol/api/JmolPropertyManager.js
  81 org/jmol/api/JmolRendererInterface.js
  82 org/jmol/api/JmolRepaintManager.js
  83 org/jmol/api/JmolScriptEvaluator.js
  84 org/jmol/api/JmolScriptFunction.js
  85 org/jmol/api/JmolScriptManager.js
  86 org/jmol/api/JmolSelectionListener.js
  87 org/jmol/api/JmolStatusListener.js
  88 org/jmol/api/JmolViewer.js
  89 org/jmol/api/PlatformViewer.js
  90 org/jmol/api/Translator.js
  91 org/jmol/atomdata/AtomDataServer.js
  92 org/jmol/atomdata/RadiusData.js
  93 org/jmol/awt/AwtFile.js
  94 org/jmol/awt/AwtFont.js
  95 org/jmol/awt/Display.js
  96 org/jmol/awt/Image.js
  97 org/jmol/awt/Mouse.js
  98 org/jmol/awt/Platform.js
  99 org/jmol/bspt/Bspf.js
 100 org/jmol/bspt/Bspt.js
 101 org/jmol/bspt/CubeIterator.js
 102 org/jmol/bspt/Element.js
 103 org/jmol/bspt/Leaf.js
 104 org/jmol/bspt/Node.js
 105 org/jmol/c/CBK.js
 106 org/jmol/c/FIL.js
 107 org/jmol/c/PAL.js
 108 org/jmol/c/STER.js
 109 org/jmol/c/STR.js
 110 org/jmol/c/VDW.js
 111 org/jmol/g3d/CylinderRenderer.js
 112 org/jmol/g3d/G3DRenderer.js
 113 org/jmol/g3d/Graphics3D.js
 114 org/jmol/g3d/HermiteRenderer.js
 115 org/jmol/g3d/LineRenderer.js
 116 org/jmol/g3d/Pixelator.js
 117 org/jmol/g3d/Platform3D.js
 118 org/jmol/g3d/PrecisionRenderer.js
 119 org/jmol/g3d/SphereRenderer.js
 120 org/jmol/g3d/TextRenderer.js
 121 org/jmol/g3d/TextString.js
 122 org/jmol/g3d/TriangleRenderer.js
 123 org/jmol/i18n/GT.js
 124 org/jmol/i18n/Language.js
 125 org/jmol/i18n/Resource.js
 126 org/jmol/io/FileReader.js
 127 org/jmol/modelset/Atom.js
 128 org/jmol/modelset/AtomCollection.js
 129 org/jmol/modelset/AtomIteratorWithinModel.js
 130 org/jmol/modelset/Bond.js
 131 org/jmol/modelset/BondCollection.js
 132 org/jmol/modelset/BondIterator.js
 133 org/jmol/modelset/BondIteratorSelected.js
 134 org/jmol/modelset/Chain.js
 135 org/jmol/modelset/Group.js
 136 org/jmol/modelset/Model.js
 137 org/jmol/modelset/ModelLoader.js
 138 org/jmol/modelset/ModelSet.js
 139 org/jmol/modelset/Orientation.js
 140 org/jmol/modelset/Structure.js
 141 org/jmol/modelsetbio/AlphaMonomer.js
 142 org/jmol/modelsetbio/AlphaPolymer.js
 143 org/jmol/modelsetbio/BioModel.js
 144 org/jmol/modelsetbio/BioModelSet.js
 145 org/jmol/modelsetbio/BioPolymer.js
 146 org/jmol/modelsetbio/BioResolver.js
 147 org/jmol/modelsetbio/Helix.js
 148 org/jmol/modelsetbio/Monomer.js
 149 org/jmol/modelsetbio/ProteinStructure.js
 150 org/jmol/render/BallsRenderer.js
 151 org/jmol/render/FontLineShapeRenderer.js
 152 org/jmol/render/FrankRenderer.js
 153 org/jmol/render/RepaintManager.js
 154 org/jmol/render/ShapeRenderer.js
 155 org/jmol/render/SticksRenderer.js
 156 org/jmol/renderbio/BackboneRenderer.js
 157 org/jmol/renderbio/BioShapeRenderer.js
 158 org/jmol/renderbio/CartoonRenderer.js
 159 org/jmol/renderbio/RocketsRenderer.js
 160 org/jmol/renderbio/StrandsRenderer.js
 161 org/jmol/script/ContextToken.js
 162 org/jmol/script/SV.js
 163 org/jmol/script/ScriptCompiler.js
 164 org/jmol/script/ScriptContext.js
 165 org/jmol/script/ScriptError.js
 166 org/jmol/script/ScriptEval.js
 167 org/jmol/script/ScriptExpr.js
 168 org/jmol/script/ScriptFlowContext.js
 169 org/jmol/script/ScriptFunction.js
 170 org/jmol/script/ScriptManager.js
 171 org/jmol/script/ScriptMathProcessor.js
 172 org/jmol/script/ScriptParam.js
 173 org/jmol/script/ScriptTokenParser.js
 174 org/jmol/script/T.js
 175 org/jmol/scriptext/MathExt.js
 176 org/jmol/shape/AtomShape.js
 177 org/jmol/shape/Balls.js
 178 org/jmol/shape/Frank.js
 179 org/jmol/shape/Mesh.js
 180 org/jmol/shape/Shape.js
 181 org/jmol/shape/Sticks.js
 182 org/jmol/shapebio/Backbone.js
 183 org/jmol/shapebio/BioShape.js
 184 org/jmol/shapebio/BioShapeCollection.js
 185 org/jmol/shapebio/Cartoon.js
 186 org/jmol/shapebio/Rockets.js
 187 org/jmol/thread/HoverWatcherThread.js
 188 org/jmol/thread/JmolThread.js
 189 org/jmol/util/BSUtil.js
 190 org/jmol/util/BoxInfo.js
 191 org/jmol/util/C.js
 192 org/jmol/util/ColorEncoder.js
 193 org/jmol/util/CommandHistory.js
 194 org/jmol/util/DefaultLogger.js
 195 org/jmol/util/Edge.js
 196 org/jmol/util/Elements.js
 197 org/jmol/util/Escape.js
 198 org/jmol/util/GData.js
 199 org/jmol/util/Geodesic.js
 200 org/jmol/util/Int2IntHash.js
 201 org/jmol/util/Int2IntHashEntry.js
 202 org/jmol/util/Logger.js
 203 org/jmol/util/LoggerInterface.js
 204 org/jmol/util/MeshSurface.js
 205 org/jmol/util/Node.js
 206 org/jmol/util/Normix.js
 207 org/jmol/util/Point3fi.js
 208 org/jmol/util/Rectangle.js
 209 org/jmol/util/Rgb16.js
 210 org/jmol/util/Shader.js
 211 org/jmol/util/SimpleEdge.js
 212 org/jmol/util/SimpleNode.js
 213 org/jmol/util/TempArray.js
 214 org/jmol/viewer/ActionManager.js
 215 org/jmol/viewer/AnimationManager.js
 216 org/jmol/viewer/ColorManager.js
 217 org/jmol/viewer/FileManager.js
 218 org/jmol/viewer/Gesture.js
 219 org/jmol/viewer/GlobalSettings.js
 220 org/jmol/viewer/JC.js
 221 org/jmol/viewer/ModelManager.js
 222 org/jmol/viewer/MotionPoint.js
 223 org/jmol/viewer/MouseState.js
 224 org/jmol/viewer/PropertyManager.js
 225 org/jmol/viewer/SelectionManager.js
 226 org/jmol/viewer/ShapeManager.js
 227 org/jmol/viewer/StateManager.js
 228 org/jmol/viewer/StatusManager.js
 229 org/jmol/viewer/TransformManager.js
 230 org/jmol/viewer/Viewer.js
 231 org/jmol/viewer/binding/Binding.js
 232 org/jmol/viewer/binding/JmolBinding.js
 233 sun/awt/image/OffScreenImageSource.js
 234 sun/font/AttributeValues.js
 235 sun/font/EAttribute.js